RNA–Protein interactions for RNA: YKR086W

PRP16, Transcript of DEAH-box RNA helicase involved in second catalytic step of splicing and in exon ligation, yeastyeast

Gene PRP16, Length 3,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP16YKR086W RPN3P40016 523 aaKnown RBP1.54□□□□□ -2.16
PRP16YKR086W SIP5P40210 489 aaKnown RBP1.54□□□□□ -2.16
PRP16YKR086W YLR225CQ05948 407 aaKnown RBP1.54□□□□□ -2.16
PRP16YKR086W YPL277CQ08989 487 aa1.54□□□□□ -2.16
PRP16YKR086W CDC53Q12018 815 aaKnown RBP1.54□□□□□ -2.16
PRP16YKR086W SPP41P38904 1435 aa1.54□□□□□ -2.16
PRP16YKR086W MLS1P30952 554 aa1.53□□□□□ -2.16
PRP16YKR086W AIM3P38266 947 aaKnown RBP1.53□□□□□ -2.16
PRP16YKR086W ETP1P38748 585 aaKnown RBP1.53□□□□□ -2.16
PRP16YKR086W ENT3P47160 408 aa1.53□□□□□ -2.16
PRP16YKR086W SIZ1Q04195 904 aa1.53□□□□□ -2.16
PRP16YKR086W ATG13Q06628 738 aa1.53□□□□□ -2.16
PRP16YKR086W LAS17Q12446 633 aa1.53□□□□□ -2.16
PRP16YKR086W USO1P25386 1790 aa1.53□□□□□ -2.16
PRP16YKR086W DOM34P33309 386 aa1.53□□□□□ -2.16
PRP16YKR086W MDL2P33311 773 aa1.53□□□□□ -2.16
PRP16YKR086W SLA2P33338 968 aa1.53□□□□□ -2.16
PRP16YKR086W LST4P34239 828 aa1.53□□□□□ -2.16
PRP16YKR086W YRO2P38079 344 aa1.53□□□□□ -2.16
PRP16YKR086W NPP2P39997 493 aa1.53□□□□□ -2.16
PRP16YKR086W BUL1P48524 976 aa1.53□□□□□ -2.16
PRP16YKR086W YGR053CP53234 283 aa1.53□□□□□ -2.16
PRP16YKR086W TIF35Q04067 274 aaKnown RBP1.53□□□□□ -2.16
PRP16YKR086W RFA1P22336 621 aaKnown RBP1.53□□□□□ -2.17
PRP16YKR086W YKL107WP34251 309 aa1.53□□□□□ -2.17
PRP16YKR086W YHL012WP38709 493 aa1.53□□□□□ -2.17
PRP16YKR086W TAT2P38967 592 aa1.53□□□□□ -2.17
PRP16YKR086W PUS2P53167 370 aa1.53□□□□□ -2.17
PRP16YKR086W CFT1Q06632 1357 aaKnown RBP1.53□□□□□ -2.17
PRP16YKR086W ABD1P32783 436 aaPredicted RBP1.52□□□□□ -2.17
PRP16YKR086W AFR1P33304 620 aa1.52□□□□□ -2.17
PRP16YKR086W RTT10Q08924 1013 aa1.52□□□□□ -2.17
PRP16YKR086W DBP5P20449 482 aaKnown RBP1.52□□□□□ -2.17
PRP16YKR086W CCZ1P38273 704 aa1.52□□□□□ -2.17
PRP16YKR086W PNT1P38969 423 aa1.52□□□□□ -2.17
PRP16YKR086W CCC2P38995 1004 aa1.52□□□□□ -2.17
PRP16YKR086W MEF2P39677 819 aa1.52□□□□□ -2.17
PRP16YKR086W YGL176CP46945 554 aa1.52□□□□□ -2.17
PRP16YKR086W VPS53P47061 822 aa1.52□□□□□ -2.17
PRP16YKR086W FAA4P47912 694 aaKnown RBP1.52□□□□□ -2.17
PRP16YKR086W TNA1P53322 534 aa1.52□□□□□ -2.17
PRP16YKR086W MAP1Q01662 387 aaKnown RBP RIP-Chip data1.52□□□□□ -2.17not detected
PRP16YKR086W RSM24Q03976 319 aa1.52□□□□□ -2.17
PRP16YKR086W DUS3Q06053 668 aaKnown RBP1.52□□□□□ -2.17
PRP16YKR086W XYL2Q07993 356 aa1.52□□□□□ -2.17
PRP16YKR086W RPS13P05756 151 aaKnown RBP1.51□□□□□ -2.17
PRP16YKR086W RPL11AP0C0W9 174 aaKnown RBP1.51□□□□□ -2.17
PRP16YKR086W ACE2P21192 770 aa1.51□□□□□ -2.17
PRP16YKR086W GIP4P39732 760 aa1.51□□□□□ -2.17
PRP16YKR086W GTF1P53260 183 aaPredicted RBP1.51□□□□□ -2.17
PRP16YKR086W MSC2Q03455 724 aa1.51□□□□□ -2.17
PRP16YKR086W CLU1Q03690 1277 aaKnown RBP1.51□□□□□ -2.17
PRP16YKR086W ESC2Q06340 456 aa1.51□□□□□ -2.17
PRP16YKR086W YDL124WQ07551 312 aaKnown RBP1.51□□□□□ -2.17
PRP16YKR086W TMA46Q12000 345 aaKnown RBP1.51□□□□□ -2.17
PRP16YKR086W RPL11BQ3E757 174 aaPredicted RBP1.51□□□□□ -2.17
PRP16YKR086W TOM70P07213 617 aaKnown RBP1.51□□□□□ -2.17
PRP16YKR086W KIN2P13186 1147 aaKnown RBP1.51□□□□□ -2.17
PRP16YKR086W CDC34P14682 295 aa1.51□□□□□ -2.17
PRP16YKR086W SYP1P25623 870 aaKnown RBP1.51□□□□□ -2.17
PRP16YKR086W CTS1P29029 562 aa1.51□□□□□ -2.17
PRP16YKR086W LYP1P32487 611 aa1.51□□□□□ -2.17
PRP16YKR086W PIK1P39104 1066 aa1.51□□□□□ -2.17
PRP16YKR086W MXR1P40029 184 aa1.51□□□□□ -2.17
PRP16YKR086W ALR2P43553 858 aa1.51□□□□□ -2.17
PRP16YKR086W PRP43P53131 767 aaKnown RBP1.51□□□□□ -2.17
PRP16YKR086W RIM8P53179 542 aa1.51□□□□□ -2.17
PRP16YKR086W VPS62P53285 467 aa1.51□□□□□ -2.17
PRP16YKR086W SLU7Q02775 382 aaKnown RBP1.51□□□□□ -2.17
PRP16YKR086W HOS3Q02959 697 aaKnown RBP1.51□□□□□ -2.17
PRP16YKR086W BUL2Q03758 920 aaKnown RBP1.51□□□□□ -2.17
PRP16YKR086W YBT1P32386 1661 aa1.51□□□□□ -2.17
PRP16YKR086W POL1P13382 1468 aa1.51□□□□□ -2.17
PRP16YKR086W CAT8P39113 1433 aa1.51□□□□□ -2.17
PRP16YKR086W CMP2P14747 604 aa1.51□□□□□ -2.17
PRP16YKR086W CDC20P26309 610 aa1.51□□□□□ -2.17
PRP16YKR086W RGD1P38339 666 aa1.51□□□□□ -2.17
PRP16YKR086W CNN1P43618 361 aa1.51□□□□□ -2.17
PRP16YKR086W BFA1P47113 574 aa1.51□□□□□ -2.17
PRP16YKR086W GCN5Q03330 439 aa1.51□□□□□ -2.17
PRP16YKR086W YPL260WQ08977 551 aa1.51□□□□□ -2.17
PRP16YKR086W HMI1Q12039 706 aa1.51□□□□□ -2.17
PRP16YKR086W SNQ2P32568 1501 aaKnown RBP1.5□□□□□ -2.17
PRP16YKR086W TRP2P00899 507 aaKnown RBP1.5□□□□□ -2.17
PRP16YKR086W CAD1P24813 409 aaKnown RBP1.5□□□□□ -2.17
PRP16YKR086W LAM1P38851 1228 aa1.5□□□□□ -2.17
PRP16YKR086W SEC26P41810 973 aaKnown RBP1.5□□□□□ -2.17
PRP16YKR086W HNT2P49775 206 aa1.5□□□□□ -2.17
PRP16YKR086W SPO75Q07798 868 aa1.5□□□□□ -2.17
PRP16YKR086W OSW2Q12202 724 aa1.5□□□□□ -2.17
PRP16YKR086W CYC1P00044 109 aaPredicted RBP1.5□□□□□ -2.17
PRP16YKR086W BI4P03879 638 aa1.5□□□□□ -2.17
PRP16YKR086W SPS1P08458 490 aa1.5□□□□□ -2.17
PRP16YKR086W CHS7P38843 316 aa1.5□□□□□ -2.17
PRP16YKR086W HUL4P40985 892 aa1.5□□□□□ -2.17
PRP16YKR086W NNF1P47149 201 aa1.5□□□□□ -2.17
PRP16YKR086W SPT20P50875 604 aa1.5□□□□□ -2.17
PRP16YKR086W YGR125WP53273 1036 aa1.5□□□□□ -2.17
PRP16YKR086W NAN1Q02931 896 aaKnown RBP1.5□□□□□ -2.17
PRP16YKR086W NAB6Q03735 1134 aaKnown RBP RIP-Chip data1.5□□□□□ -2.17not detected
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms