RNA–Protein interactions for RNA: YJL020C

BBC1, Transcript of Protein possibly involved in assembly of actin patches, yeast

Gene BBC1, Length 3,474 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BBC1	YJL020C	FMP25	Q08023	583 aa		4.87	□□□□□ -1.63
BBC1	YJL020C	GAS4	Q08271	471 aa		4.87	□□□□□ -1.63
BBC1	YJL020C	LAP2	Q10740	671 aa		4.87	□□□□□ -1.63
BBC1	YJL020C	MET8	P15807	274 aa		4.87	□□□□□ -1.63
BBC1	YJL020C	NIC96	P34077	839 aa		4.87	□□□□□ -1.63
BBC1	YJL020C	FMP10	P40098	244 aa		4.87	□□□□□ -1.63
BBC1	YJL020C	YIL092W	P40497	633 aa		4.87	□□□□□ -1.63
BBC1	YJL020C	REX3	Q12090	404 aa		4.87	□□□□□ -1.63
BBC1	YJL020C	AI4	P03878	556 aa		4.87	□□□□□ -1.63
BBC1	YJL020C	RAD26	P40352	1085 aa		4.87	□□□□□ -1.63
BBC1	YJL020C	IRC6	P43615	237 aa		4.87	□□□□□ -1.63
BBC1	YJL020C	RAT1	Q02792	1006 aa	Known RBP	4.87	□□□□□ -1.63
BBC1	YJL020C	ADY3	Q07732	790 aa		4.87	□□□□□ -1.63
BBC1	YJL020C	SUP35	P05453	685 aa	Known RBP	4.86	□□□□□ -1.63
BBC1	YJL020C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	RIP-Chip
BBC1	YJL020C	CBP3	P21560	335 aa		4.86	□□□□□ -1.63
BBC1	YJL020C	RPC53	P25441	422 aa		4.86	□□□□□ -1.63
BBC1	YJL020C	MIC60	P36112	540 aa		4.86	□□□□□ -1.63
BBC1	YJL020C	PIC2	P40035	300 aa		4.86	□□□□□ -1.63
BBC1	YJL020C	LSM5	P40089	93 aa	Known RBP	4.86	□□□□□ -1.63
BBC1	YJL020C	YIR014W	P40570	242 aa		4.86	□□□□□ -1.63
BBC1	YJL020C	NCS2	P53923	493 aa	Predicted RBP	4.86	□□□□□ -1.63
BBC1	YJL020C	FRA1	Q07825	749 aa		4.86	□□□□□ -1.63
BBC1	YJL020C	CLP1	Q08685	445 aa	Predicted RBP	4.86	□□□□□ -1.63
BBC1	YJL020C	RIM15	P43565	1770 aa		4.86	□□□□□ -1.63
BBC1	YJL020C	NUP145	P49687	1317 aa		4.86	□□□□□ -1.63
BBC1	YJL020C	SAN1	P22470	610 aa		4.86	□□□□□ -1.63
BBC1	YJL020C	DBP1	P24784	617 aa	Known RBP	4.86	□□□□□ -1.63
BBC1	YJL020C	YBL028C	P38202	106 aa		4.86	□□□□□ -1.63
BBC1	YJL020C	LAM5	P43560	674 aa		4.86	□□□□□ -1.63
BBC1	YJL020C	CDC55	Q00362	526 aa		4.86	□□□□□ -1.63
BBC1	YJL020C	TDA9	Q04545	1251 aa		4.86	□□□□□ -1.63
BBC1	YJL020C	YPR084W	Q06821	456 aa		4.86	□□□□□ -1.63
BBC1	YJL020C	TSC13	Q99190	310 aa		4.86	□□□□□ -1.63
BBC1	YJL020C	PRE9	P23638	258 aa	Known RBP	4.85	□□□□□ -1.63
BBC1	YJL020C	CDC60	P26637	1090 aa	Known RBP	4.85	□□□□□ -1.63
BBC1	YJL020C	BEM3	P32873	1128 aa		4.85	□□□□□ -1.63
BBC1	YJL020C	CNS1	P33313	385 aa		4.85	□□□□□ -1.63
BBC1	YJL020C	TOK1	P40310	691 aa		4.85	□□□□□ -1.63
BBC1	YJL020C	CTR9	P89105	1077 aa		4.85	□□□□□ -1.63
BBC1	YJL020C	YKU80	Q04437	629 aa		4.85	□□□□□ -1.63
BBC1	YJL020C	RTT109	Q07794	436 aa		4.85	□□□□□ -1.63
BBC1	YJL020C	ENV9	Q08651	330 aa		4.85	□□□□□ -1.63
BBC1	YJL020C	FAP7	Q12055	197 aa	Predicted RBP	4.85	□□□□□ -1.63
BBC1	YJL020C	MDM12	Q92328	271 aa		4.85	□□□□□ -1.63
BBC1	YJL020C	HSF1	P10961	833 aa		4.85	□□□□□ -1.63
BBC1	YJL020C	VMA2	P16140	517 aa	Known RBP	4.85	□□□□□ -1.63
BBC1	YJL020C	LYP1	P32487	611 aa		4.85	□□□□□ -1.63
BBC1	YJL020C	RIB7	P33312	244 aa		4.85	□□□□□ -1.63
BBC1	YJL020C	AMN1	P38285	549 aa	Predicted RBP	4.85	□□□□□ -1.63
BBC1	YJL020C	JEM1	P40358	645 aa		4.85	□□□□□ -1.63
BBC1	YJL020C	YFR006W	P43590	535 aa		4.85	□□□□□ -1.63
BBC1	YJL020C	NIT2	P47016	307 aa		4.85	□□□□□ -1.63
BBC1	YJL020C	KEL2	P50090	882 aa		4.85	□□□□□ -1.63
BBC1	YJL020C	PCL10	P53124	433 aa		4.85	□□□□□ -1.63
BBC1	YJL020C	SSL2	Q00578	843 aa		4.85	□□□□□ -1.63
BBC1	YJL020C	MTQ2	Q03920	221 aa	Predicted RBP	4.85	□□□□□ -1.63
BBC1	YJL020C	CUE5	Q08412	411 aa	Known RBP	4.85	□□□□□ -1.63
BBC1	YJL020C	MPC54	Q08550	464 aa		4.85	□□□□□ -1.63
BBC1	YJL020C	TRE2	Q08693	809 aa		4.85	□□□□□ -1.63
BBC1	YJL020C	RPB10	P22139	70 aa		4.85	□□□□□ -1.63
BBC1	YJL020C	EAP1	P36041	632 aa	Known RBP	4.85	□□□□□ -1.63
BBC1	YJL020C	YPR097W	Q06839	1073 aa		4.85	□□□□□ -1.63
BBC1	YJL020C	TRP2	P00899	507 aa	Known RBP	4.84	□□□□□ -1.63
BBC1	YJL020C	HSP60	P19882	572 aa	Known RBP	4.84	□□□□□ -1.63
BBC1	YJL020C	PRP45	P28004	379 aa	Predicted RBP	4.84	□□□□□ -1.63
BBC1	YJL020C	SLI15	P38283	698 aa		4.84	□□□□□ -1.63
BBC1	YJL020C	GDH3	P39708	457 aa		4.84	□□□□□ -1.63
BBC1	YJL020C	YER034W	P40022	185 aa	Known RBP	4.84	□□□□□ -1.63
BBC1	YJL020C	XKS1	P42826	600 aa		4.84	□□□□□ -1.63
BBC1	YJL020C	NUT1	P53114	1132 aa		4.84	□□□□□ -1.63
BBC1	YJL020C	HAS1	Q03532	505 aa	Known RBP	4.84	□□□□□ -1.63
BBC1	YJL020C	ETT1	Q08421	412 aa	Known RBP	4.84	□□□□□ -1.63
BBC1	YJL020C	YLL054C	Q12244	843 aa		4.84	□□□□□ -1.63
BBC1	YJL020C	MIH1	P23748	554 aa		4.84	□□□□□ -1.63
BBC1	YJL020C	DLD1	P32891	587 aa		4.84	□□□□□ -1.63
BBC1	YJL020C	PPQ1	P32945	549 aa		4.84	□□□□□ -1.63
BBC1	YJL020C	HAL5	P38970	855 aa	Known RBP	4.84	□□□□□ -1.63
BBC1	YJL020C	HIS6	P40545	261 aa		4.84	□□□□□ -1.63
BBC1	YJL020C	SKP2	P42843	763 aa		4.84	□□□□□ -1.63
BBC1	YJL020C	CIT3	P43635	486 aa		4.84	□□□□□ -1.63
BBC1	YJL020C	SET2	P46995	733 aa	Known RBP	4.84	□□□□□ -1.63
BBC1	YJL020C	STR2	P47164	639 aa		4.84	□□□□□ -1.63
BBC1	YJL020C	ERV25	P54837	211 aa	Known RBP	4.84	□□□□□ -1.63
BBC1	YJL020C	UTP10	P42945	1769 aa	Known RBP	4.84	□□□□□ -1.64
BBC1	YJL020C	PXA2	P34230	853 aa		4.84	□□□□□ -1.64
BBC1	YJL020C	YBR238C	P38330	731 aa	Known RBP	4.84	□□□□□ -1.64
BBC1	YJL020C	AXL1	P40851	1208 aa		4.84	□□□□□ -1.64
BBC1	YJL020C	YGR153W	P48238	217 aa		4.84	□□□□□ -1.64
BBC1	YJL020C	MSB3	P48566	633 aa	Predicted RBP	4.84	□□□□□ -1.64
BBC1	YJL020C	UFD2	P54860	961 aa		4.84	□□□□□ -1.64
BBC1	YJL020C	RSC4	Q02206	625 aa		4.84	□□□□□ -1.64
BBC1	YJL020C	PRP42	Q03776	544 aa	Known RBP	4.84	□□□□□ -1.64
BBC1	YJL020C	MDM38	Q08179	573 aa		4.84	□□□□□ -1.64
BBC1	YJL020C	SMF3	Q12078	473 aa	Predicted RBP	4.84	□□□□□ -1.64
BBC1	YJL020C	BAP2	P38084	609 aa		4.83	□□□□□ -1.64
BBC1	YJL020C	RIM4	P38741	713 aa		4.83	□□□□□ -1.64
BBC1	YJL020C	OTU2	P38747	307 aa	Known RBP	4.83	□□□□□ -1.64
BBC1	YJL020C	NOP16	P40007	231 aa	Known RBP	4.83	□□□□□ -1.64
BBC1	YJL020C	PCL7	P40186	285 aa		4.83	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms