RNA–Protein interactions for RNA: YIL003W

CFD1, Transcript of Highly conserved iron-sulfur cluster binding protein, yeast

Gene CFD1, Length 882 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CFD1	YIL003W	IQG1	Q12280	1495 aa		4.64	□□□□□ -1.67
CFD1	YIL003W	PRP9	P19736	530 aa	Known RBP	4.64	□□□□□ -1.67
CFD1	YIL003W	AFG2	P32794	780 aa		4.64	□□□□□ -1.67
CFD1	YIL003W	POL12	P38121	705 aa	Predicted RBP	4.64	□□□□□ -1.67
CFD1	YIL003W	MCM7	P38132	845 aa		4.64	□□□□□ -1.67
CFD1	YIL003W	MMM1	P41800	426 aa		4.64	□□□□□ -1.67
CFD1	YIL003W	ZDS1	P50111	915 aa	Known RBP	4.64	□□□□□ -1.67
CFD1	YIL003W	YDL124W	Q07551	312 aa	Known RBP	4.64	□□□□□ -1.67
CFD1	YIL003W	YIG1	Q08956	461 aa		4.64	□□□□□ -1.67
CFD1	YIL003W	DFG16	Q99234	619 aa		4.64	□□□□□ -1.67
CFD1	YIL003W	RPL8A	P17076	256 aa	Known RBP	4.63	□□□□□ -1.67
CFD1	YIL003W	YCR015C	P25616	317 aa		4.63	□□□□□ -1.67
CFD1	YIL003W	MPH1	P40562	993 aa		4.63	□□□□□ -1.67
CFD1	YIL003W	MAL11	P53048	616 aa		4.63	□□□□□ -1.67
CFD1	YIL003W	PRP43	P53131	767 aa	Known RBP	4.63	□□□□□ -1.67
CFD1	YIL003W	YNR029C	P53729	429 aa	Known RBP	4.63	□□□□□ -1.67
CFD1	YIL003W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	not detected
CFD1	YIL003W	YOR223W	Q12015	292 aa		4.63	□□□□□ -1.67
CFD1	YIL003W	NSI1	Q12457	570 aa		4.63	□□□□□ -1.67
CFD1	YIL003W	PDR10	P51533	1564 aa		4.62	□□□□□ -1.67
CFD1	YIL003W	HBS1	P32769	611 aa	Known RBP	4.62	□□□□□ -1.67
CFD1	YIL003W	CIT3	P43635	486 aa		4.62	□□□□□ -1.67
CFD1	YIL003W	HSV2	P50079	448 aa	Predicted RBP	4.62	□□□□□ -1.67
CFD1	YIL003W	YNR063W	P53749	607 aa		4.62	□□□□□ -1.67
CFD1	YIL003W	RKM2	Q03942	479 aa		4.62	□□□□□ -1.67
CFD1	YIL003W	YOR059C	Q08448	450 aa	Known RBP	4.62	□□□□□ -1.67
CFD1	YIL003W	HBN1	Q96VH4	193 aa		4.62	□□□□□ -1.67
CFD1	YIL003W	MLS1	P30952	554 aa		4.61	□□□□□ -1.67
CFD1	YIL003W	ARL1	P38116	183 aa	Known RBP	4.61	□□□□□ -1.67
CFD1	YIL003W	ALG3	P38179	458 aa		4.61	□□□□□ -1.67
CFD1	YIL003W	CCC2	P38995	1004 aa		4.61	□□□□□ -1.67
CFD1	YIL003W	GDH3	P39708	457 aa		4.61	□□□□□ -1.67
CFD1	YIL003W	NUG1	P40010	520 aa	Known RBP	4.61	□□□□□ -1.67
CFD1	YIL003W	SIP5	P40210	489 aa	Known RBP	4.61	□□□□□ -1.67
CFD1	YIL003W	HNT2	P49775	206 aa		4.61	□□□□□ -1.67
CFD1	YIL003W	MEC3	Q02574	474 aa		4.61	□□□□□ -1.67
CFD1	YIL003W	TFB2	Q02939	513 aa		4.61	□□□□□ -1.67
CFD1	YIL003W	UGO1	Q03327	502 aa		4.61	□□□□□ -1.67
CFD1	YIL003W	TOP3	P13099	656 aa		4.6	□□□□□ -1.67
CFD1	YIL003W	SFP1	P32432	683 aa		4.6	□□□□□ -1.67
CFD1	YIL003W	PEX6	P33760	1030 aa		4.6	□□□□□ -1.67
CFD1	YIL003W	SNF7	P39929	240 aa	Known RBP	4.6	□□□□□ -1.67
CFD1	YIL003W	SEC7	P11075	2009 aa	Known RBP	4.6	□□□□□ -1.67
CFD1	YIL003W	WHI3	P34761	661 aa	Known RBP	4.59	□□□□□ -1.67
CFD1	YIL003W	YKL222C	P35995	705 aa		4.59	□□□□□ -1.67
CFD1	YIL003W	YBR284W	P38150	797 aa		4.59	□□□□□ -1.67
CFD1	YIL003W	ATG14	P38270	344 aa		4.59	□□□□□ -1.67
CFD1	YIL003W	RGD1	P38339	666 aa		4.59	□□□□□ -1.67
CFD1	YIL003W	REI1	P38344	393 aa	Predicted RBP	4.59	□□□□□ -1.67
CFD1	YIL003W	GCV1	P48015	400 aa		4.59	□□□□□ -1.67
CFD1	YIL003W	ATG13	Q06628	738 aa		4.59	□□□□□ -1.67
CFD1	YIL003W	YOL057W	Q08225	711 aa		4.59	□□□□□ -1.67
CFD1	YIL003W	PTC5	Q12511	572 aa		4.59	□□□□□ -1.67
CFD1	YIL003W	CHC1	P22137	1653 aa	Known RBP	4.58	□□□□□ -1.68
CFD1	YIL003W	TOM70	P07213	617 aa	Known RBP	4.58	□□□□□ -1.68
CFD1	YIL003W	GAS1	P22146	559 aa	Known RBP	4.58	□□□□□ -1.68
CFD1	YIL003W	MEF1	P25039	761 aa		4.58	□□□□□ -1.68
CFD1	YIL003W	GPT2	P36148	743 aa		4.58	□□□□□ -1.68
CFD1	YIL003W	YAR028W	P39548	234 aa		4.58	□□□□□ -1.68
CFD1	YIL003W	GEM1	P39722	662 aa		4.58	□□□□□ -1.68
CFD1	YIL003W	YMR074C	Q04773	145 aa		4.58	□□□□□ -1.68
CFD1	YIL003W	YDR306C	Q06640	478 aa		4.58	□□□□□ -1.68
CFD1	YIL003W	CDA2	Q06703	312 aa		4.58	□□□□□ -1.68
CFD1	YIL003W	ESC8	Q08119	714 aa		4.58	□□□□□ -1.68
CFD1	YIL003W	ALG6	Q12001	544 aa	Known RBP	4.58	□□□□□ -1.68
CFD1	YIL003W	GNT1	Q12096	491 aa		4.58	□□□□□ -1.68
CFD1	YIL003W	YLL054C	Q12244	843 aa		4.58	□□□□□ -1.68
CFD1	YIL003W	PDR15	Q04182	1529 aa	Known RBP	4.57	□□□□□ -1.68
CFD1	YIL003W	NUP157	P40064	1391 aa	Known RBP	4.57	□□□□□ -1.68
CFD1	YIL003W	CDC11	P32458	415 aa		4.57	□□□□□ -1.68
CFD1	YIL003W	HSP78	P33416	811 aa		4.57	□□□□□ -1.68
CFD1	YIL003W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
CFD1	YIL003W	HLJ1	P48353	224 aa		4.57	□□□□□ -1.68
CFD1	YIL003W	RCM1	P53972	490 aa		4.57	□□□□□ -1.68
CFD1	YIL003W	SPP382	Q06411	708 aa	Predicted RBP	4.57	□□□□□ -1.68
CFD1	YIL003W	MSD1	P15179	658 aa	Known RBP	4.56	□□□□□ -1.68
CFD1	YIL003W	AAR2	P32357	355 aa	Predicted RBP	4.56	□□□□□ -1.68
CFD1	YIL003W	TSA1	P34760	196 aa	Known RBP	4.56	□□□□□ -1.68
CFD1	YIL003W	OYE3	P41816	400 aa	Predicted RBP	4.56	□□□□□ -1.68
CFD1	YIL003W	UBP6	P43593	499 aa	Known RBP	4.56	□□□□□ -1.68
CFD1	YIL003W	FOL1	P53848	824 aa		4.56	□□□□□ -1.68
CFD1	YIL003W	YNL193W	P53870	558 aa		4.56	□□□□□ -1.68
CFD1	YIL003W	DOT1	Q04089	582 aa	Known RBP	4.56	□□□□□ -1.68
CFD1	YIL003W	MDM12	Q92328	271 aa		4.56	□□□□□ -1.68
CFD1	YIL003W	ARO1	P08566	1588 aa	Known RBP	4.56	□□□□□ -1.68
CFD1	YIL003W	YER152C	P10356	443 aa		4.55	□□□□□ -1.68
CFD1	YIL003W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	not detected
CFD1	YIL003W	MRC1	P25588	1096 aa		4.55	□□□□□ -1.68
CFD1	YIL003W	DOM34	P33309	386 aa		4.55	□□□□□ -1.68
CFD1	YIL003W	PET10	P36139	283 aa		4.55	□□□□□ -1.68
CFD1	YIL003W	GRX7	P38068	203 aa		4.55	□□□□□ -1.68
CFD1	YIL003W	PAF1	P38351	445 aa		4.55	□□□□□ -1.68
CFD1	YIL003W	PNT1	P38969	423 aa		4.55	□□□□□ -1.68
CFD1	YIL003W	DSS1	P39112	969 aa		4.55	□□□□□ -1.68
CFD1	YIL003W	TPM2	P40414	161 aa		4.55	□□□□□ -1.68
CFD1	YIL003W	YGR237C	P50089	785 aa		4.55	□□□□□ -1.68
CFD1	YIL003W	YGR045C	P53229	120 aa		4.55	□□□□□ -1.68
CFD1	YIL003W	TPO2	P53283	614 aa		4.55	□□□□□ -1.68
CFD1	YIL003W	ORC3	P54790	616 aa		4.55	□□□□□ -1.68
CFD1	YIL003W	DUS3	Q06053	668 aa	Known RBP	4.55	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 123.9 ms