RNA–Protein interactions for RNA: YHR172W

SPC97, Transcript of Component of the microtubule-nucleating Tub4p (gamma-tubulin) complex, yeastyeast

Gene SPC97, Length 2,472 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC97YHR172W PCL10P53124 433 aa5.89□□□□□ -1.47
SPC97YHR172W GUP1P53154 560 aa5.89□□□□□ -1.47
SPC97YHR172W RAT1Q02792 1006 aaKnown RBP5.89□□□□□ -1.47
SPC97YHR172W YDL073WQ07454 984 aa5.89□□□□□ -1.47
SPC97YHR172W REX3Q12090 404 aa5.89□□□□□ -1.47
SPC97YHR172W ILS1P09436 1072 aaKnown RBP5.88□□□□□ -1.47
SPC97YHR172W SEC2P17065 759 aa5.88□□□□□ -1.47
SPC97YHR172W SLX5P32828 619 aaKnown RBP5.88□□□□□ -1.47
SPC97YHR172W MCM7P38132 845 aa5.88□□□□□ -1.47
SPC97YHR172W MEF2P39677 819 aa5.88□□□□□ -1.47
SPC97YHR172W AOS1Q06624 347 aa5.88□□□□□ -1.47
SPC97YHR172W GFA1P14742 717 aaKnown RBP5.88□□□□□ -1.47
SPC97YHR172W PDX1P16451 410 aa5.88□□□□□ -1.47
SPC97YHR172W RAD53P22216 821 aa5.88□□□□□ -1.47
SPC97YHR172W RIB7P33312 244 aa5.88□□□□□ -1.47
SPC97YHR172W DCW1P36091 449 aa5.88□□□□□ -1.47
SPC97YHR172W BYE1P36106 594 aa5.88□□□□□ -1.47
SPC97YHR172W XDJ1P39102 459 aa5.88□□□□□ -1.47
SPC97YHR172W KAP123P40069 1113 aaKnown RBP5.88□□□□□ -1.47
SPC97YHR172W SEC5P89102 971 aa5.88□□□□□ -1.47
SPC97YHR172W CUE5Q08412 411 aaKnown RBP5.88□□□□□ -1.47
SPC97YHR172W TOP3P13099 656 aa5.87□□□□□ -1.47
SPC97YHR172W PET123P17558 318 aa5.87□□□□□ -1.47
SPC97YHR172W HNM1P19807 563 aa5.87□□□□□ -1.47
SPC97YHR172W SFL1P20134 766 aa5.87□□□□□ -1.47
SPC97YHR172W APM2P38700 605 aa5.87□□□□□ -1.47
SPC97YHR172W SPC72P39723 622 aa5.87□□□□□ -1.47
SPC97YHR172W SBE2P42223 864 aaKnown RBP5.87□□□□□ -1.47
SPC97YHR172W ALF1P53904 254 aa5.87□□□□□ -1.47
SPC97YHR172W APP1P53933 587 aa5.87□□□□□ -1.47
SPC97YHR172W VPS9P54787 451 aa5.87□□□□□ -1.47
SPC97YHR172W TIM10P87108 93 aa5.87□□□□□ -1.47
SPC97YHR172W EAR1Q03212 550 aa5.87□□□□□ -1.47
SPC97YHR172W RAD18P10862 487 aa5.87□□□□□ -1.47
SPC97YHR172W SEC18P18759 758 aaKnown RBP5.87□□□□□ -1.47
SPC97YHR172W DAL7P21826 554 aa5.87□□□□□ -1.47
SPC97YHR172W DAL3P32459 195 aa5.87□□□□□ -1.47
SPC97YHR172W RPN2P32565 945 aaKnown RBP5.87□□□□□ -1.47
SPC97YHR172W SAH1P39954 449 aaKnown RBP5.87□□□□□ -1.47
SPC97YHR172W NTA1P40354 457 aa5.87□□□□□ -1.47
SPC97YHR172W VHR1P40522 640 aa5.87□□□□□ -1.47
SPC97YHR172W DAN4P47179 1161 aa5.87□□□□□ -1.47
SPC97YHR172W ZIP2P53061 704 aa5.87□□□□□ -1.47
SPC97YHR172W HOT1Q03213 719 aa5.87□□□□□ -1.47
SPC97YHR172W PRP42Q03776 544 aaKnown RBP5.87□□□□□ -1.47
SPC97YHR172W GAD1Q04792 585 aa5.87□□□□□ -1.47
SPC97YHR172W YOL114CQ12322 202 aa5.87□□□□□ -1.47
SPC97YHR172W YMR084WA2P2R3 262 aa5.86□□□□□ -1.47
SPC97YHR172W CDC9P04819 755 aa5.86□□□□□ -1.47
SPC97YHR172W PMS1P14242 873 aa5.86□□□□□ -1.47
SPC97YHR172W TFB1P32776 642 aa5.86□□□□□ -1.47
SPC97YHR172W RER2P35196 286 aa5.86□□□□□ -1.47
SPC97YHR172W FTH1P38310 465 aa5.86□□□□□ -1.47
SPC97YHR172W RIC1P40395 1056 aa5.86□□□□□ -1.47
SPC97YHR172W YAP5P40574 245 aa5.86□□□□□ -1.47
SPC97YHR172W FYV8P46949 817 aaKnown RBP5.86□□□□□ -1.47
SPC97YHR172W MNN11P46985 422 aaKnown RBP5.86□□□□□ -1.47
SPC97YHR172W SPP382Q06411 708 aaPredicted RBP5.86□□□□□ -1.47
SPC97YHR172W PEX15Q08215 383 aa5.86□□□□□ -1.47
SPC97YHR172W SWC3P31376 625 aa5.86□□□□□ -1.47
SPC97YHR172W MTH1P35198 433 aa5.86□□□□□ -1.47
SPC97YHR172W IRS4P36115 615 aaKnown RBP5.86□□□□□ -1.47
SPC97YHR172W PIM1P36775 1133 aa5.86□□□□□ -1.47
SPC97YHR172W TOK1P40310 691 aa5.86□□□□□ -1.47
SPC97YHR172W UBP6P43593 499 aaKnown RBP5.86□□□□□ -1.47
SPC97YHR172W MDE1P47095 244 aa5.86□□□□□ -1.47
SPC97YHR172W SLD3P53135 668 aa5.86□□□□□ -1.47
SPC97YHR172W CNM67P53865 581 aaKnown RBP5.86□□□□□ -1.47
SPC97YHR172W AGE1Q04412 482 aa5.86□□□□□ -1.47
SPC97YHR172W SEM1O94742 89 aa5.85□□□□□ -1.47
SPC97YHR172W YER152CP10356 443 aa5.85□□□□□ -1.47
SPC97YHR172W COX11P19516 300 aaKnown RBP5.85□□□□□ -1.47
SPC97YHR172W HBS1P32769 611 aaKnown RBP5.85□□□□□ -1.47
SPC97YHR172W PSY2P40164 858 aa5.85□□□□□ -1.47
SPC97YHR172W ARP9Q05123 467 aa5.85□□□□□ -1.47
SPC97YHR172W UTP21Q06078 939 aaPredicted RBP5.85□□□□□ -1.47
SPC97YHR172W ARV1Q06541 321 aa5.85□□□□□ -1.47
SPC97YHR172W YCG1Q06680 1035 aa5.85□□□□□ -1.47
SPC97YHR172W GUD1Q07729 489 aa5.85□□□□□ -1.47
SPC97YHR172W OTU2P38747 307 aaKnown RBP5.85□□□□□ -1.47
SPC97YHR172W YHR131CP38835 850 aa5.85□□□□□ -1.47
SPC97YHR172W LAM5P43560 674 aa5.85□□□□□ -1.47
SPC97YHR172W NUT1P53114 1132 aa5.85□□□□□ -1.47
SPC97YHR172W YGR130CP53278 816 aa5.85□□□□□ -1.47
SPC97YHR172W SPO1P53541 631 aa5.85□□□□□ -1.47
SPC97YHR172W HDA2Q06629 674 aa5.85□□□□□ -1.47
SPC97YHR172W TIF6Q12522 245 aaKnown RBP5.85□□□□□ -1.47
SPC97YHR172W VMA3P25515 160 aa5.84□□□□□ -1.47
SPC97YHR172W DOM34P33309 386 aa5.84□□□□□ -1.47
SPC97YHR172W PIN4P34217 668 aaKnown RBP RIP-Chip data5.84□□□□□ -1.47not detected
SPC97YHR172W SCD5P34758 872 aa5.84□□□□□ -1.47
SPC97YHR172W YLF2P38746 405 aa5.84□□□□□ -1.47
SPC97YHR172W HXT13P39924 564 aa5.84□□□□□ -1.47
SPC97YHR172W YEL068CP39977 110 aa5.84□□□□□ -1.47
SPC97YHR172W LSM5P40089 93 aaKnown RBP5.84□□□□□ -1.47
SPC97YHR172W MON1P53129 644 aa5.84□□□□□ -1.47
SPC97YHR172W HXT17P53631 564 aa5.84□□□□□ -1.47
SPC97YHR172W UBP10P53874 792 aaPredicted RBP5.84□□□□□ -1.47
SPC97YHR172W HXT15P54854 567 aa5.84□□□□□ -1.47
SPC97YHR172W TAP42Q04372 366 aa5.84□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 19.9 ms