RNA–Protein interactions for RNA: YGR194C

XKS1, Transcript of Xylulokinase, yeast

Gene XKS1, Length 1,803 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
XKS1	YGR194C	TPM1	P17536	199 aa	Known RBP	4.9	□□□□□ -1.63
XKS1	YGR194C	ALO1	P54783	526 aa	Known RBP	4.9	□□□□□ -1.63
XKS1	YGR194C	DAL4	Q04895	635 aa		4.9	□□□□□ -1.63
XKS1	YGR194C	GIC2	Q06648	383 aa		4.9	□□□□□ -1.63
XKS1	YGR194C	PDR18	P53756	1333 aa		4.89	□□□□□ -1.63
XKS1	YGR194C	TRP3	P00937	484 aa		4.89	□□□□□ -1.63
XKS1	YGR194C	CPA2	P03965	1118 aa	Known RBP	4.89	□□□□□ -1.63
XKS1	YGR194C	PET111	P08468	800 aa		4.89	□□□□□ -1.63
XKS1	YGR194C	GPA1	P08539	472 aa		4.89	□□□□□ -1.63
XKS1	YGR194C	MRP7	P12687	371 aa		4.89	□□□□□ -1.63
XKS1	YGR194C	MBR1	P23493	339 aa		4.89	□□□□□ -1.63
XKS1	YGR194C	RDS1	P25611	832 aa		4.89	□□□□□ -1.63
XKS1	YGR194C	GPT2	P36148	743 aa		4.89	□□□□□ -1.63
XKS1	YGR194C	REI1	P38344	393 aa	Predicted RBP	4.89	□□□□□ -1.63
XKS1	YGR194C	NOC2	P39744	710 aa	Known RBP	4.89	□□□□□ -1.63
XKS1	YGR194C	MSH4	P40965	878 aa	Predicted RBP	4.89	□□□□□ -1.63
XKS1	YGR194C	DOT1	Q04089	582 aa	Known RBP	4.89	□□□□□ -1.63
XKS1	YGR194C	RRB1	Q04225	511 aa	Known RBP	4.89	□□□□□ -1.63
XKS1	YGR194C	COG4	Q06096	861 aa		4.89	□□□□□ -1.63
XKS1	YGR194C	NCB2	Q92317	146 aa		4.89	□□□□□ -1.63
XKS1	YGR194C	YOL087C	Q99247	1116 aa		4.89	□□□□□ -1.63
XKS1	YGR194C	HSP104	P31539	908 aa	Known RBP	4.88	□□□□□ -1.63
XKS1	YGR194C	RPT1	P33299	467 aa	Known RBP	4.88	□□□□□ -1.63
XKS1	YGR194C	AAP1	P37898	856 aa	Known RBP	4.88	□□□□□ -1.63
XKS1	YGR194C	YER130C	P39959	443 aa		4.88	□□□□□ -1.63
XKS1	YGR194C	FYV10	P40492	516 aa		4.88	□□□□□ -1.63
XKS1	YGR194C	ULP1	Q02724	621 aa		4.88	□□□□□ -1.63
XKS1	YGR194C	OXR1	Q08952	273 aa		4.88	□□□□□ -1.63
XKS1	YGR194C	DDP1	Q99321	188 aa	Known RBP	4.88	□□□□□ -1.63
XKS1	YGR194C	DEF1	P35732	738 aa	Known RBP	4.88	□□□□□ -1.63
XKS1	YGR194C	YKL077W	P36081	392 aa		4.88	□□□□□ -1.63
XKS1	YGR194C	YKR073C	P36153	106 aa		4.88	□□□□□ -1.63
XKS1	YGR194C	ECM21	P38167	1117 aa	Known RBP	4.88	□□□□□ -1.63
XKS1	YGR194C	SHU2	P38957	223 aa		4.88	□□□□□ -1.63
XKS1	YGR194C	INP52	P50942	1183 aa		4.88	□□□□□ -1.63
XKS1	YGR194C	GYL1	Q04322	720 aa		4.88	□□□□□ -1.63
XKS1	YGR194C	RBA50	Q04418	439 aa		4.88	□□□□□ -1.63
XKS1	YGR194C	NSE3	Q05541	303 aa		4.88	□□□□□ -1.63
XKS1	YGR194C	AOS1	Q06624	347 aa		4.88	□□□□□ -1.63
XKS1	YGR194C	YCG1	Q06680	1035 aa		4.88	□□□□□ -1.63
XKS1	YGR194C	BRE1	Q07457	700 aa	Known RBP	4.88	□□□□□ -1.63
XKS1	YGR194C	ALG6	Q12001	544 aa	Known RBP	4.88	□□□□□ -1.63
XKS1	YGR194C	HXK1	P04806	485 aa	Known RBP	4.87	□□□□□ -1.63
XKS1	YGR194C	MSH3	P25336	1018 aa		4.87	□□□□□ -1.63
XKS1	YGR194C	MSH1	P25846	959 aa		4.87	□□□□□ -1.63
XKS1	YGR194C	CDC15	P27636	974 aa		4.87	□□□□□ -1.63
XKS1	YGR194C	SWH1	P35845	1188 aa		4.87	□□□□□ -1.63
XKS1	YGR194C	FAA3	P39002	694 aa		4.87	□□□□□ -1.63
XKS1	YGR194C	TFG2	P41896	400 aa	Predicted RBP	4.87	□□□□□ -1.63
XKS1	YGR194C	SLS1	P42900	643 aa		4.87	□□□□□ -1.63
XKS1	YGR194C	RAD4	P14736	754 aa		4.86	□□□□□ -1.63
XKS1	YGR194C	SRP40	P32583	406 aa	Predicted RBP	4.86	□□□□□ -1.63
XKS1	YGR194C	NEM1	P38757	446 aa		4.86	□□□□□ -1.63
XKS1	YGR194C	SPO74	P45819	413 aa		4.86	□□□□□ -1.63
XKS1	YGR194C	APT1	P49435	187 aa	Known RBP	4.86	□□□□□ -1.63
XKS1	YGR194C	DOS2	P54858	310 aa		4.86	□□□□□ -1.63
XKS1	YGR194C	WAR1	Q03631	944 aa		4.86	□□□□□ -1.63
XKS1	YGR194C	PSK2	Q08217	1101 aa		4.86	□□□□□ -1.63
XKS1	YGR194C	YOL057W	Q08225	711 aa		4.86	□□□□□ -1.63
XKS1	YGR194C	MED7	Q08278	222 aa		4.86	□□□□□ -1.63
XKS1	YGR194C	APL4	Q12028	832 aa		4.86	□□□□□ -1.63
XKS1	YGR194C	MSB1	P21339	1137 aa	Known RBP	4.86	□□□□□ -1.63
XKS1	YGR194C	GSY2	P27472	705 aa		4.86	□□□□□ -1.63
XKS1	YGR194C	OMA1	P36163	345 aa		4.86	□□□□□ -1.63
XKS1	YGR194C	PCH2	P38126	564 aa		4.86	□□□□□ -1.63
XKS1	YGR194C	SIC1	P38634	284 aa		4.86	□□□□□ -1.63
XKS1	YGR194C	CAJ1	P39101	391 aa		4.86	□□□□□ -1.63
XKS1	YGR194C	VID28	P40547	921 aa		4.86	□□□□□ -1.63
XKS1	YGR194C	YPT11	P48559	417 aa		4.86	□□□□□ -1.63
XKS1	YGR194C	YGR045C	P53229	120 aa		4.86	□□□□□ -1.63
XKS1	YGR194C	YPL109C	Q02981	657 aa		4.86	□□□□□ -1.63
XKS1	YGR194C	PGA3	Q12746	312 aa	Known RBP	4.86	□□□□□ -1.63
XKS1	YGR194C	UBC1	P21734	215 aa	Known RBP	4.85	□□□□□ -1.63
XKS1	YGR194C	RRP43	P25359	394 aa	Predicted RBP	4.85	□□□□□ -1.63
XKS1	YGR194C	MAL33	P38157	468 aa		4.85	□□□□□ -1.63
XKS1	YGR194C	RFC5	P38251	354 aa		4.85	□□□□□ -1.63
XKS1	YGR194C	SAP1	P39955	897 aa	Known RBP	4.85	□□□□□ -1.63
XKS1	YGR194C	SPO22	P40511	975 aa		4.85	□□□□□ -1.63
XKS1	YGR194C	PRP43	P53131	767 aa	Known RBP	4.85	□□□□□ -1.63
XKS1	YGR194C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.85	□□□□□ -1.63	not detected
XKS1	YGR194C	PEX13	P80667	386 aa		4.85	□□□□□ -1.63
XKS1	YGR194C	ADI1	Q03677	179 aa		4.85	□□□□□ -1.63
XKS1	YGR194C	RRP15	Q06511	250 aa	Predicted RBP	4.85	□□□□□ -1.63
XKS1	YGR194C	OMS1	Q06668	471 aa		4.85	□□□□□ -1.63
XKS1	YGR194C	YPL225W	Q08971	146 aa	Known RBP	4.85	□□□□□ -1.63
XKS1	YGR194C	YPL150W	Q12152	901 aa		4.85	□□□□□ -1.63
XKS1	YGR194C	SWI1	P09547	1314 aa		4.85	□□□□□ -1.63
XKS1	YGR194C	NDC80	P40460	691 aa		4.84	□□□□□ -1.63
XKS1	YGR194C	RSM26	P47141	266 aa		4.84	□□□□□ -1.63
XKS1	YGR194C	YGL242C	P53066	181 aa		4.84	□□□□□ -1.63
XKS1	YGR194C	MLC1	P53141	149 aa		4.84	□□□□□ -1.63
XKS1	YGR194C	MRPS35	P53292	345 aa		4.84	□□□□□ -1.63
XKS1	YGR194C	UTP5	Q04177	643 aa	Known RBP	4.84	□□□□□ -1.63
XKS1	YGR194C	DUR1,2	P32528	1835 aa	Known RBP	4.84	□□□□□ -1.64
XKS1	YGR194C	CYC7	P00045	113 aa		4.83	□□□□□ -1.64
XKS1	YGR194C	HEM3	P28789	327 aa		4.83	□□□□□ -1.64
XKS1	YGR194C	MAC1	P35192	417 aa		4.83	□□□□□ -1.64
XKS1	YGR194C	YKT6	P36015	200 aa	Known RBP	4.83	□□□□□ -1.64
XKS1	YGR194C	NUP133	P36161	1157 aa		4.83	□□□□□ -1.64
XKS1	YGR194C	RGD1	P38339	666 aa		4.83	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 20.5 ms