RNA–Protein interactions for RNA: YGR134W

CAF130, Transcript of Subunit of the CCR4-NOT transcriptional regulatory complex, yeastyeast

Gene CAF130, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF130YGR134W MSD1P15179 658 aaKnown RBP4□□□□□ -1.77
CAF130YGR134W IRE1P32361 1115 aa4□□□□□ -1.77
CAF130YGR134W VPH1P32563 840 aaKnown RBP4□□□□□ -1.77
CAF130YGR134W FBP26P32604 452 aa4□□□□□ -1.77
CAF130YGR134W VMA8P32610 256 aaKnown RBP4□□□□□ -1.77
CAF130YGR134W YKL050CP35736 922 aa4□□□□□ -1.77
CAF130YGR134W BIT2P38346 545 aa4□□□□□ -1.77
CAF130YGR134W BSD2P38356 321 aa4□□□□□ -1.77
CAF130YGR134W RVS167P39743 482 aaKnown RBP4□□□□□ -1.77
CAF130YGR134W NAS2P40555 220 aa4□□□□□ -1.77
CAF130YGR134W SBE2P42223 864 aaKnown RBP4□□□□□ -1.77
CAF130YGR134W OCA1P50946 238 aaPredicted RBP4□□□□□ -1.77
CAF130YGR134W GTR1Q00582 310 aa4□□□□□ -1.77
CAF130YGR134W HLR1Q04429 423 aa4□□□□□ -1.77
CAF130YGR134W MRL1Q06815 381 aa4□□□□□ -1.77
CAF130YGR134W RKR1Q04781 1562 aa4□□□□□ -1.77
CAF130YGR134W AEP2P22136 580 aa4□□□□□ -1.77
CAF130YGR134W MLF3P32047 452 aa4□□□□□ -1.77
CAF130YGR134W PYC2P32327 1180 aaKnown RBP4□□□□□ -1.77
CAF130YGR134W ERG3P32353 365 aa4□□□□□ -1.77
CAF130YGR134W DAL1P32375 460 aa4□□□□□ -1.77
CAF130YGR134W DPH2P32461 534 aa4□□□□□ -1.77
CAF130YGR134W AFG2P32794 780 aa4□□□□□ -1.77
CAF130YGR134W MOT2P34909 587 aaKnown RBP4□□□□□ -1.77
CAF130YGR134W DEF1P35732 738 aaKnown RBP4□□□□□ -1.77
CAF130YGR134W PET10P36139 283 aa4□□□□□ -1.77
CAF130YGR134W EXO5P38289 585 aa4□□□□□ -1.77
CAF130YGR134W GYP8P43570 497 aa4□□□□□ -1.77
CAF130YGR134W GUS1P46655 708 aaKnown RBP RIP-Chip data4□□□□□ -1.77not detected
CAF130YGR134W TIM10P87108 93 aa4□□□□□ -1.77
CAF130YGR134W NSI1Q12457 570 aa4□□□□□ -1.77
CAF130YGR134W BI4P03879 638 aa3.99□□□□□ -1.77
CAF130YGR134W CAF20P12962 161 aaKnown RBP3.99□□□□□ -1.77
CAF130YGR134W AAC3P18238 307 aa3.99□□□□□ -1.77
CAF130YGR134W ATP12P22135 325 aa3.99□□□□□ -1.77
CAF130YGR134W PTH2P34222 208 aa3.99□□□□□ -1.77
CAF130YGR134W MNN11P46985 422 aaKnown RBP3.99□□□□□ -1.77
CAF130YGR134W PAP2P53632 584 aaKnown RBP3.99□□□□□ -1.77
CAF130YGR134W SRC1Q03707 834 aa3.99□□□□□ -1.77
CAF130YGR134W VTI1Q04338 217 aa3.99□□□□□ -1.77
CAF130YGR134W YTM1Q12024 460 aaPredicted RBP3.99□□□□□ -1.77
CAF130YGR134W DPH6Q12429 685 aa3.99□□□□□ -1.77
CAF130YGR134W INH1P01097 85 aa3.99□□□□□ -1.77
CAF130YGR134W CPA2P03965 1118 aaKnown RBP3.99□□□□□ -1.77
CAF130YGR134W NCP1P16603 691 aaKnown RBP3.99□□□□□ -1.77
CAF130YGR134W PAH1P32567 862 aa3.99□□□□□ -1.77
CAF130YGR134W MDJ1P35191 511 aa3.99□□□□□ -1.77
CAF130YGR134W SPC72P39723 622 aa3.99□□□□□ -1.77
CAF130YGR134W DOT6P40059 670 aaKnown RBP3.99□□□□□ -1.77
CAF130YGR134W UTP21Q06078 939 aaPredicted RBP3.99□□□□□ -1.77
CAF130YGR134W SCC2Q04002 1493 aa3.99□□□□□ -1.77
CAF130YGR134W TY1B-DR3Q99231 1755 aa3.99□□□□□ -1.77
CAF130YGR134W PEX28P38848 579 aa3.99□□□□□ -1.77
CAF130YGR134W VPS41P38959 992 aa3.99□□□□□ -1.77
CAF130YGR134W MON1P53129 644 aa3.99□□□□□ -1.77
CAF130YGR134W ROD1Q02805 837 aa3.99□□□□□ -1.77
CAF130YGR134W ECM38Q05902 660 aaPredicted RBP3.99□□□□□ -1.77
CAF130YGR134W TSR2Q06672 205 aaKnown RBP3.99□□□□□ -1.77
CAF130YGR134W CCR4P31384 837 aaKnown RBP3.98□□□□□ -1.77
CAF130YGR134W EAP1P36041 632 aaKnown RBP3.98□□□□□ -1.77
CAF130YGR134W DJP1P40564 432 aa3.98□□□□□ -1.77
CAF130YGR134W ATG33Q06485 197 aa3.98□□□□□ -1.77
CAF130YGR134W TRM8Q12009 286 aa3.98□□□□□ -1.77
CAF130YGR134W YOL114CQ12322 202 aa3.98□□□□□ -1.77
CAF130YGR134W SNF1P06782 633 aaKnown RBP3.98□□□□□ -1.77
CAF130YGR134W TFC3P34111 1160 aa3.98□□□□□ -1.77
CAF130YGR134W QDR2P40474 542 aa3.98□□□□□ -1.77
CAF130YGR134W AXL1P40851 1208 aa3.98□□□□□ -1.77
CAF130YGR134W SUM1P46676 1062 aa3.98□□□□□ -1.77
CAF130YGR134W CAF120P53836 1060 aa3.98□□□□□ -1.77
CAF130YGR134W RCF1Q03713 159 aa3.98□□□□□ -1.77
CAF130YGR134W ISN1Q99312 450 aa3.98□□□□□ -1.77
CAF130YGR134W KOG1P38873 1557 aa3.98□□□□□ -1.77
CAF130YGR134W TOM70P07213 617 aaKnown RBP3.97□□□□□ -1.77
CAF130YGR134W MTF2P10849 440 aa3.97□□□□□ -1.77
CAF130YGR134W MSH3P25336 1018 aa3.97□□□□□ -1.77
CAF130YGR134W ERT1P38140 529 aa3.97□□□□□ -1.77
CAF130YGR134W SSN3P39073 555 aa3.97□□□□□ -1.77
CAF130YGR134W GPD2P41911 440 aaKnown RBP3.97□□□□□ -1.77
CAF130YGR134W PDR10P51533 1564 aa3.97□□□□□ -1.77
CAF130YGR134W MLP2P40457 1679 aa3.97□□□□□ -1.77
CAF130YGR134W SLA1P32790 1244 aa3.97□□□□□ -1.77
CAF130YGR134W YKL133CP36066 463 aa3.97□□□□□ -1.77
CAF130YGR134W AXL2P38928 823 aa3.97□□□□□ -1.77
CAF130YGR134W SKP1P52286 194 aa3.97□□□□□ -1.77
CAF130YGR134W PEX29Q03370 554 aa3.97□□□□□ -1.77
CAF130YGR134W HFI1Q12060 488 aa3.97□□□□□ -1.77
CAF130YGR134W TY2B-LR1P0C2J3 1770 aa3.97□□□□□ -1.77
CAF130YGR134W TY2B-FP0CX63 1770 aa3.97□□□□□ -1.77
CAF130YGR134W TY2B-GR2P0CX64 1770 aa3.97□□□□□ -1.77
CAF130YGR134W TY2B-CP25384 1770 aa3.97□□□□□ -1.77
CAF130YGR134W TY2B-DR2Q03494 1770 aa3.97□□□□□ -1.77
CAF130YGR134W TY1B-DR1Q03855 1755 aa3.97□□□□□ -1.77
CAF130YGR134W TY2B-DR3Q07791 1770 aaKnown RBP3.97□□□□□ -1.77
CAF130YGR134W TY2B-OR1Q12113 1770 aa3.97□□□□□ -1.77
CAF130YGR134W TY2B-DR1Q12472 1770 aa3.97□□□□□ -1.77
CAF130YGR134W TY2B-OR2Q12501 1770 aa3.97□□□□□ -1.77
CAF130YGR134W KAR2P16474 682 aaKnown RBP3.97□□□□□ -1.77
CAF130YGR134W PET123P17558 318 aa3.97□□□□□ -1.77
CAF130YGR134W GFD2P25370 566 aaKnown RBP3.97□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms