RNA–Protein interactions for RNA: YGR074W

SMD1, Transcript of Core Sm protein Sm D1, yeastyeast

Gene SMD1, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD1YGR074W AFG2P32794 780 aa2.91□□□□□ -1.94
SMD1YGR074W YHR020WP38708 688 aaKnown RBP2.91□□□□□ -1.94
SMD1YGR074W MNN10P50108 393 aaKnown RBP2.91□□□□□ -1.94
SMD1YGR074W RXT3Q07458 294 aa2.91□□□□□ -1.94
SMD1YGR074W THS1P04801 734 aaKnown RBP2.9□□□□□ -1.95
SMD1YGR074W TOM70P07213 617 aaKnown RBP2.9□□□□□ -1.95
SMD1YGR074W KIP1P28742 1111 aa2.9□□□□□ -1.95
SMD1YGR074W MPH1P40562 993 aa2.9□□□□□ -1.95
SMD1YGR074W PFD1P46988 109 aa2.9□□□□□ -1.95
SMD1YGR074W YGL081WP53156 320 aa2.9□□□□□ -1.95
SMD1YGR074W PBP1P53297 722 aaKnown RBP2.9□□□□□ -1.95
SMD1YGR074W TNA1P53322 534 aa2.9□□□□□ -1.95
SMD1YGR074W CTF4Q01454 927 aa2.9□□□□□ -1.95
SMD1YGR074W HOS3Q02959 697 aaKnown RBP2.9□□□□□ -1.95
SMD1YGR074W RSM24Q03976 319 aa2.9□□□□□ -1.95
SMD1YGR074W DUS3Q06053 668 aaKnown RBP2.9□□□□□ -1.95
SMD1YGR074W YER152CP10356 443 aa2.89□□□□□ -1.95
SMD1YGR074W STE11P23561 717 aa2.89□□□□□ -1.95
SMD1YGR074W TSR4P25040 408 aa2.89□□□□□ -1.95
SMD1YGR074W HSV2P50079 448 aaPredicted RBP2.89□□□□□ -1.95
SMD1YGR074W MCM6P53091 1017 aaKnown RBP2.89□□□□□ -1.95
SMD1YGR074W DUS4Q06063 367 aa2.89□□□□□ -1.95
SMD1YGR074W YPL066WQ12194 479 aa2.89□□□□□ -1.95
SMD1YGR074W ERR1P0CX10 437 aa2.88□□□□□ -1.95
SMD1YGR074W ERR2P0CX11 437 aa2.88□□□□□ -1.95
SMD1YGR074W GSY1P23337 708 aa2.88□□□□□ -1.95
SMD1YGR074W PMI40P29952 429 aaKnown RBP2.88□□□□□ -1.95
SMD1YGR074W YRO2P38079 344 aa2.88□□□□□ -1.95
SMD1YGR074W PIK1P39104 1066 aa2.88□□□□□ -1.95
SMD1YGR074W GPB2P39717 880 aa2.88□□□□□ -1.95
SMD1YGR074W SAH1P39954 449 aaKnown RBP2.88□□□□□ -1.95
SMD1YGR074W RPN3P40016 523 aaKnown RBP2.88□□□□□ -1.95
SMD1YGR074W AIM21P40563 679 aa2.88□□□□□ -1.95
SMD1YGR074W SUN4P53616 420 aa2.88□□□□□ -1.95
SMD1YGR074W TAF8Q03750 510 aa2.88□□□□□ -1.95
SMD1YGR074W ACK1Q07622 623 aaPredicted RBP2.88□□□□□ -1.95
SMD1YGR074W PPM2Q08282 695 aa2.88□□□□□ -1.95
SMD1YGR074W ACM1Q08981 209 aa2.88□□□□□ -1.95
SMD1YGR074W NTO1Q12311 748 aa2.88□□□□□ -1.95
SMD1YGR074W RPL11AP0C0W9 174 aaKnown RBP2.87□□□□□ -1.95
SMD1YGR074W SRM1P21827 482 aa2.87□□□□□ -1.95
SMD1YGR074W CDC20P26309 610 aa2.87□□□□□ -1.95
SMD1YGR074W BAP2P38084 609 aa2.87□□□□□ -1.95
SMD1YGR074W YBR284WP38150 797 aa2.87□□□□□ -1.95
SMD1YGR074W RFC5P38251 354 aa2.87□□□□□ -1.95
SMD1YGR074W PNT1P38969 423 aa2.87□□□□□ -1.95
SMD1YGR074W GUS1P46655 708 aaKnown RBP RIP-Chip data2.87□□□□□ -1.95not detected
SMD1YGR074W SLI1P53304 468 aa2.87□□□□□ -1.95
SMD1YGR074W UGO1Q03327 502 aa2.87□□□□□ -1.95
SMD1YGR074W PLB2Q03674 706 aa2.87□□□□□ -1.95
SMD1YGR074W IOC4Q04213 475 aa2.87□□□□□ -1.95
SMD1YGR074W RCL1Q08096 367 aaPredicted RBP2.87□□□□□ -1.95
SMD1YGR074W GPB1Q08886 897 aa2.87□□□□□ -1.95
SMD1YGR074W YPR071WQ12346 211 aa2.87□□□□□ -1.95
SMD1YGR074W RPL11BQ3E757 174 aaPredicted RBP2.87□□□□□ -1.95
SMD1YGR074W HBN1Q96VH4 193 aa2.87□□□□□ -1.95
SMD1YGR074W NOP14Q99207 810 aaKnown RBP2.87□□□□□ -1.95
SMD1YGR074W GAL10P04397 699 aa2.86□□□□□ -1.95
SMD1YGR074W CMP2P14747 604 aa2.86□□□□□ -1.95
SMD1YGR074W MSH2P25847 964 aa2.86□□□□□ -1.95
SMD1YGR074W PEX6P33760 1030 aa2.86□□□□□ -1.95
SMD1YGR074W LST4P34239 828 aa2.86□□□□□ -1.95
SMD1YGR074W UGA2P38067 497 aa2.86□□□□□ -1.95
SMD1YGR074W CRP1P38845 465 aaKnown RBP2.86□□□□□ -1.95
SMD1YGR074W DSS1P39112 969 aa2.86□□□□□ -1.95
SMD1YGR074W GDH3P39708 457 aa2.86□□□□□ -1.95
SMD1YGR074W MXR1P40029 184 aa2.86□□□□□ -1.95
SMD1YGR074W SIP5P40210 489 aaKnown RBP2.86□□□□□ -1.95
SMD1YGR074W YJR142WP47173 342 aa2.86□□□□□ -1.95
SMD1YGR074W CCM1P48237 864 aaPredicted RBP2.86□□□□□ -1.95
SMD1YGR074W NIT3P49954 291 aa2.86□□□□□ -1.95
SMD1YGR074W RTA1P53047 317 aa2.86□□□□□ -1.95
SMD1YGR074W NPL3Q01560 414 aaKnown RBP RIP-Chip data2.86□□□□□ -1.95 RIP-Chip
SMD1YGR074W LCD1Q04377 747 aa2.86□□□□□ -1.95
SMD1YGR074W TMA10Q06177 86 aa2.86□□□□□ -1.95
SMD1YGR074W YPR196WQ06595 470 aa2.86□□□□□ -1.95
SMD1YGR074W ADR1P07248 1323 aa2.86□□□□□ -1.95
SMD1YGR074W PHR1P05066 565 aaKnown RBP RIP-Chip data2.85□□□□□ -1.95not detected
SMD1YGR074W KIN2P13186 1147 aaKnown RBP2.85□□□□□ -1.95
SMD1YGR074W RAD53P22216 821 aa2.85□□□□□ -1.95
SMD1YGR074W HBS1P32769 611 aaKnown RBP2.85□□□□□ -1.95
SMD1YGR074W REC104P33323 182 aa2.85□□□□□ -1.95
SMD1YGR074W PET10P36139 283 aa2.85□□□□□ -1.95
SMD1YGR074W BET3P36149 193 aa2.85□□□□□ -1.95
SMD1YGR074W SIT1P39980 628 aa2.85□□□□□ -1.95
SMD1YGR074W UBP6P43593 499 aaKnown RBP2.85□□□□□ -1.95
SMD1YGR074W HLJ1P48353 224 aa2.85□□□□□ -1.95
SMD1YGR074W SSB1P11484 613 aaKnown RBP2.84□□□□□ -1.95
SMD1YGR074W TOM20P35180 183 aa2.84□□□□□ -1.95
SMD1YGR074W SSB2P40150 613 aaKnown RBP2.84□□□□□ -1.95
SMD1YGR074W ALG2P43636 503 aa2.84□□□□□ -1.95
SMD1YGR074W DAM1P53267 343 aa2.84□□□□□ -1.95
SMD1YGR074W NTG2Q08214 380 aa2.84□□□□□ -1.95
SMD1YGR074W TOP3P13099 656 aa2.83□□□□□ -1.96
SMD1YGR074W MSD1P15179 658 aaKnown RBP2.83□□□□□ -1.96
SMD1YGR074W RFA1P22336 621 aaKnown RBP2.83□□□□□ -1.96
SMD1YGR074W DBP2P24783 546 aaKnown RBP2.83□□□□□ -1.96
SMD1YGR074W CDC12P32468 407 aaKnown RBP2.83□□□□□ -1.96
SMD1YGR074W RRT14P40470 206 aa2.83□□□□□ -1.96
SMD1YGR074W PMT3P47190 753 aa2.83□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 131.4 ms