RNA–Protein interactions for RNA: YGR003W

CUL3, Transcript of Ubiquitin-protein ligase, yeastyeast

Gene CUL3, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUL3YGR003W GCR1P07261 785 aa2.44□□□□□ -2.02
CUL3YGR003W SYP1P25623 870 aaKnown RBP2.44□□□□□ -2.02
CUL3YGR003W HXT13P39924 564 aa2.44□□□□□ -2.02
CUL3YGR003W CNN1P43618 361 aa2.44□□□□□ -2.02
CUL3YGR003W HXT17P53631 564 aa2.44□□□□□ -2.02
CUL3YGR003W HXT15P54854 567 aa2.44□□□□□ -2.02
CUL3YGR003W GFA1P14742 717 aaKnown RBP2.44□□□□□ -2.02
CUL3YGR003W DUT1P33317 147 aa2.44□□□□□ -2.02
CUL3YGR003W CCC2P38995 1004 aa2.44□□□□□ -2.02
CUL3YGR003W GEM1P39722 662 aa2.44□□□□□ -2.02
CUL3YGR003W URM1P40554 99 aaPredicted RBP2.44□□□□□ -2.02
CUL3YGR003W ENT3P47160 408 aa2.44□□□□□ -2.02
CUL3YGR003W SIW14P53965 281 aa2.44□□□□□ -2.02
CUL3YGR003W OSW2Q12202 724 aa2.44□□□□□ -2.02
CUL3YGR003W TDP1P38319 544 aa2.43□□□□□ -2.02
CUL3YGR003W RPL11AP0C0W9 174 aaKnown RBP2.42□□□□□ -2.02
CUL3YGR003W ATG19P35193 415 aa2.42□□□□□ -2.02
CUL3YGR003W MGE1P38523 228 aa2.42□□□□□ -2.02
CUL3YGR003W YAP1801P38856 637 aa2.42□□□□□ -2.02
CUL3YGR003W THI7Q05998 598 aa2.42□□□□□ -2.02
CUL3YGR003W CDA1Q06702 301 aa2.42□□□□□ -2.02
CUL3YGR003W RPL11BQ3E757 174 aaPredicted RBP2.42□□□□□ -2.02
CUL3YGR003W ILV6P25605 309 aaKnown RBP2.42□□□□□ -2.02
CUL3YGR003W DBP5P20449 482 aaKnown RBP2.41□□□□□ -2.02
CUL3YGR003W SLA2P33338 968 aa2.41□□□□□ -2.02
CUL3YGR003W MRPS18P42847 217 aa2.41□□□□□ -2.02
CUL3YGR003W MCD1Q12158 566 aa2.41□□□□□ -2.02
CUL3YGR003W HCA4P20448 770 aaKnown RBP2.41□□□□□ -2.02
CUL3YGR003W SRP101P32916 621 aa2.41□□□□□ -2.02
CUL3YGR003W FLO10P36170 1169 aa2.41□□□□□ -2.02
CUL3YGR003W MPH1P40562 993 aa2.41□□□□□ -2.02
CUL3YGR003W MRL1Q06815 381 aa2.41□□□□□ -2.02
CUL3YGR003W TRM13Q12383 476 aa2.41□□□□□ -2.02
CUL3YGR003W HSF1P10961 833 aa2.4□□□□□ -2.03
CUL3YGR003W DBP2P24783 546 aaKnown RBP2.4□□□□□ -2.03
CUL3YGR003W YHL017WP38745 532 aa2.4□□□□□ -2.03
CUL3YGR003W WHI4Q07655 649 aaKnown RBP2.4□□□□□ -2.03
CUL3YGR003W DAS1P47005 663 aa2.4□□□□□ -2.03
CUL3YGR003W MTC3P53077 123 aa2.4□□□□□ -2.03
CUL3YGR003W EEB1Q02891 456 aa2.4□□□□□ -2.03
CUL3YGR003W ESC2Q06340 456 aa2.4□□□□□ -2.03
CUL3YGR003W GNT1Q12096 491 aa2.4□□□□□ -2.03
CUL3YGR003W RER2P35196 286 aa2.39□□□□□ -2.03
CUL3YGR003W TAH11P47112 604 aa2.39□□□□□ -2.03
CUL3YGR003W PPS1P38148 807 aa2.38□□□□□ -2.03
CUL3YGR003W ESF1Q06344 628 aaKnown RBP2.38□□□□□ -2.03
CUL3YGR003W YPL066WQ12194 479 aa2.38□□□□□ -2.03
CUL3YGR003W YUR1P26725 428 aa2.38□□□□□ -2.03
CUL3YGR003W PAM1P37304 830 aaKnown RBP2.38□□□□□ -2.03
CUL3YGR003W FAA4P47912 694 aaKnown RBP2.38□□□□□ -2.03
CUL3YGR003W VPS73P53142 486 aaKnown RBP2.38□□□□□ -2.03
CUL3YGR003W ARO10Q06408 635 aa2.38□□□□□ -2.03
CUL3YGR003W CDC34P14682 295 aa2.37□□□□□ -2.03
CUL3YGR003W ASF1P32447 279 aa2.37□□□□□ -2.03
CUL3YGR003W MCM7P38132 845 aa2.37□□□□□ -2.03
CUL3YGR003W ECM21P38167 1117 aaKnown RBP2.37□□□□□ -2.03
CUL3YGR003W CDC43P18898 376 aa2.37□□□□□ -2.03
CUL3YGR003W MOT2P34909 587 aaKnown RBP2.37□□□□□ -2.03
CUL3YGR003W NAB6Q03735 1134 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03not detected
CUL3YGR003W TIF35Q04067 274 aaKnown RBP2.37□□□□□ -2.03
CUL3YGR003W FRE5Q08908 694 aa2.37□□□□□ -2.03
CUL3YGR003W TRP2P00899 507 aaKnown RBP2.36□□□□□ -2.03
CUL3YGR003W PET112P33893 541 aa2.36□□□□□ -2.03
CUL3YGR003W YKL069WP36088 180 aa2.36□□□□□ -2.03
CUL3YGR003W VPS16Q03308 798 aa2.36□□□□□ -2.03
CUL3YGR003W JIP5Q06214 492 aaPredicted RBP2.36□□□□□ -2.03
CUL3YGR003W SPP382Q06411 708 aaPredicted RBP2.36□□□□□ -2.03
CUL3YGR003W RTT10Q08924 1013 aa2.36□□□□□ -2.03
CUL3YGR003W UPC2Q12151 913 aa2.36□□□□□ -2.03
CUL3YGR003W MET6P05694 767 aaKnown RBP2.36□□□□□ -2.03
CUL3YGR003W PNT1P38969 423 aa2.36□□□□□ -2.03
CUL3YGR003W YIL166CP40445 542 aa2.36□□□□□ -2.03
CUL3YGR003W GAT1P43574 510 aa2.36□□□□□ -2.03
CUL3YGR003W YLR225CQ05948 407 aaKnown RBP2.36□□□□□ -2.03
CUL3YGR003W MET10P39692 1035 aa2.35□□□□□ -2.03
CUL3YGR003W YGR053CP53234 283 aa2.35□□□□□ -2.03
CUL3YGR003W RMD1Q03441 430 aa2.35□□□□□ -2.03
CUL3YGR003W SED4P25365 1065 aa2.34□□□□□ -2.03
CUL3YGR003W RGT1P32862 1170 aa2.34□□□□□ -2.03
CUL3YGR003W ERG5P54781 538 aa2.34□□□□□ -2.03
CUL3YGR003W PIN2Q12057 282 aa2.34□□□□□ -2.03
CUL3YGR003W PRI2P20457 528 aa2.34□□□□□ -2.04
CUL3YGR003W ABD1P32783 436 aaPredicted RBP2.34□□□□□ -2.04
CUL3YGR003W TYW3P53177 273 aa2.34□□□□□ -2.04
CUL3YGR003W GDE1Q02979 1223 aa2.34□□□□□ -2.04
CUL3YGR003W ADY2P25613 283 aa2.33□□□□□ -2.04
CUL3YGR003W ALD6P54115 500 aaKnown RBP2.33□□□□□ -2.04
CUL3YGR003W MDM38Q08179 573 aa2.33□□□□□ -2.04
CUL3YGR003W MET3P08536 511 aa2.33□□□□□ -2.04
CUL3YGR003W KIN3P22209 435 aa2.33□□□□□ -2.04
CUL3YGR003W LYP1P32487 611 aa2.33□□□□□ -2.04
CUL3YGR003W MNR2P35724 969 aa2.33□□□□□ -2.04
CUL3YGR003W VAC8P39968 578 aa2.33□□□□□ -2.04
CUL3YGR003W STB2P46679 850 aa2.33□□□□□ -2.04
CUL3YGR003W SRT1Q03175 343 aa2.33□□□□□ -2.04
CUL3YGR003W YLL058WQ12198 575 aa2.33□□□□□ -2.04
CUL3YGR003W INO1P11986 533 aa2.32□□□□□ -2.04
CUL3YGR003W YKL151CP36059 337 aa2.32□□□□□ -2.04
CUL3YGR003W SLU7Q02775 382 aaKnown RBP2.32□□□□□ -2.04
CUL3YGR003W DLT1Q04216 342 aa2.32□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 75 ms