RNA–Protein interactions for RNA: YER168C

CCA1, Transcript of ATP (CTP):tRNA-specific tRNA nucleotidyltransferase, yeast

Gene CCA1, Length 1,641 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CCA1	YER168C	YOR223W	Q12015	292 aa		11.5	□□□□□ -0.57
CCA1	YER168C	ARP6	Q12509	438 aa		11.5	□□□□□ -0.57
CCA1	YER168C	KRS1	P15180	591 aa	Known RBP	11.49	□□□□□ -0.57
CCA1	YER168C	GCG1	P32656	232 aa	Known RBP	11.49	□□□□□ -0.57
CCA1	YER168C	DIP5	P53388	608 aa		11.49	□□□□□ -0.57
CCA1	YER168C	RNT1	Q02555	471 aa		11.49	□□□□□ -0.57
CCA1	YER168C	DIG1	Q03063	452 aa	Known RBP	11.49	□□□□□ -0.57
CCA1	YER168C	YMR102C	Q03177	834 aa		11.49	□□□□□ -0.57
CCA1	YER168C	RUD3	Q12234	484 aa	Known RBP	11.49	□□□□□ -0.57
CCA1	YER168C	MRF1	P30775	413 aa	Predicted RBP	11.49	□□□□□ -0.57
CCA1	YER168C	YEL1	P34225	687 aa		11.49	□□□□□ -0.57
CCA1	YER168C	SDS3	P40505	327 aa		11.49	□□□□□ -0.57
CCA1	YER168C	VPS4	P52917	437 aa		11.49	□□□□□ -0.57
CCA1	YER168C	WHI4	Q07655	649 aa	Known RBP	11.49	□□□□□ -0.57
CCA1	YER168C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	11.48	□□□□□ -0.57	not detected
CCA1	YER168C	MCD4	P36051	919 aa		11.48	□□□□□ -0.57
CCA1	YER168C	YJR079W	P47126	109 aa		11.48	□□□□□ -0.57
CCA1	YER168C	KAP114	P53067	1004 aa		11.48	□□□□□ -0.57
CCA1	YER168C	TRM44	Q02648	567 aa	Known RBP	11.48	□□□□□ -0.57
CCA1	YER168C	TRP2	P00899	507 aa	Known RBP	11.47	□□□□□ -0.57
CCA1	YER168C	SUP45	P12385	437 aa	Known RBP	11.47	□□□□□ -0.57
CCA1	YER168C	PRP22	P24384	1145 aa	Known RBP	11.47	□□□□□ -0.57
CCA1	YER168C	SPT21	P35209	758 aa		11.47	□□□□□ -0.57
CCA1	YER168C	PGM2	P37012	569 aa	Known RBP	11.47	□□□□□ -0.57
CCA1	YER168C	VHR2	P40041	505 aa		11.47	□□□□□ -0.57
CCA1	YER168C	VID30	P53076	958 aa		11.47	□□□□□ -0.57
CCA1	YER168C	YGR021W	P53212	290 aa		11.47	□□□□□ -0.57
CCA1	YER168C	SOL4	P53315	255 aa		11.47	□□□□□ -0.57
CCA1	YER168C	GIR2	Q03768	265 aa	Predicted RBP	11.47	□□□□□ -0.57
CCA1	YER168C	UTP14	Q04500	899 aa	Known RBP	11.47	□□□□□ -0.57
CCA1	YER168C	SRD1	P09007	221 aa		11.46	□□□□□ -0.57
CCA1	YER168C	YKL023W	P36103	277 aa	Known RBP	11.46	□□□□□ -0.57
CCA1	YER168C	GPD2	P41911	440 aa	Known RBP	11.46	□□□□□ -0.57
CCA1	YER168C	YLR297W	Q05899	129 aa		11.46	□□□□□ -0.57
CCA1	YER168C	YOL087C	Q99247	1116 aa		11.46	□□□□□ -0.57
CCA1	YER168C	PCK1	P10963	549 aa		11.46	□□□□□ -0.58
CCA1	YER168C	MSM1	P22438	575 aa		11.46	□□□□□ -0.58
CCA1	YER168C	ESS1	P22696	170 aa		11.46	□□□□□ -0.58
CCA1	YER168C	PGM1	P33401	570 aa	Known RBP	11.46	□□□□□ -0.58
CCA1	YER168C	LAS1	P36146	502 aa	Predicted RBP	11.46	□□□□□ -0.58
CCA1	YER168C	CSR1	Q06705	408 aa	Known RBP	11.46	□□□□□ -0.58
CCA1	YER168C	UBP11	P36026	717 aa		11.45	□□□□□ -0.58
CCA1	YER168C	PHO88	P38264	188 aa	Predicted RBP	11.45	□□□□□ -0.58
CCA1	YER168C	TPS3	P38426	1054 aa	Known RBP	11.45	□□□□□ -0.58
CCA1	YER168C	FIG4	P42837	879 aa		11.45	□□□□□ -0.58
CCA1	YER168C	SGM1	P47166	707 aa		11.45	□□□□□ -0.58
CCA1	YER168C	STE23	Q06010	1027 aa		11.45	□□□□□ -0.58
CCA1	YER168C	TSR1	Q07381	788 aa	Known RBP	11.45	□□□□□ -0.58
CCA1	YER168C	CLN3	P13365	580 aa		11.44	□□□□□ -0.58
CCA1	YER168C	GAP1	P19145	602 aa	Predicted RBP	11.44	□□□□□ -0.58
CCA1	YER168C	SLD2	P34252	453 aa		11.44	□□□□□ -0.58
CCA1	YER168C	HXT8	P40886	569 aa		11.44	□□□□□ -0.58
CCA1	YER168C	ARK1	P53974	638 aa		11.44	□□□□□ -0.58
CCA1	YER168C	ALD6	P54115	500 aa	Known RBP	11.44	□□□□□ -0.58
CCA1	YER168C	ECI1	Q05871	280 aa		11.44	□□□□□ -0.58
CCA1	YER168C	APL5	Q08951	932 aa	Known RBP	11.44	□□□□□ -0.58
CCA1	YER168C	ERG12	P07277	443 aa		11.43	□□□□□ -0.58
CCA1	YER168C	SUV3	P32580	737 aa		11.43	□□□□□ -0.58
CCA1	YER168C	RCK2	P38623	610 aa		11.43	□□□□□ -0.58
CCA1	YER168C	LCB2	P40970	561 aa		11.43	□□□□□ -0.58
CCA1	YER168C	CNM67	P53865	581 aa	Known RBP	11.43	□□□□□ -0.58
CCA1	YER168C	ZRT2	Q12436	422 aa		11.43	□□□□□ -0.58
CCA1	YER168C	RPS9B	P05755	195 aa	Known RBP	11.42	□□□□□ -0.58
CCA1	YER168C	OLA1	P38219	394 aa	Known RBP	11.42	□□□□□ -0.58
CCA1	YER168C	RPC17	P47076	161 aa		11.42	□□□□□ -0.58
CCA1	YER168C	COS5	P47187	383 aa		11.42	□□□□□ -0.58
CCA1	YER168C	LIF1	P53150	421 aa		11.42	□□□□□ -0.58
CCA1	YER168C	YLR326W	Q06170	240 aa	Known RBP	11.42	□□□□□ -0.58
CCA1	YER168C	ATG20	Q07528	640 aa		11.42	□□□□□ -0.58
CCA1	YER168C	PHO8	P11491	566 aa		11.42	□□□□□ -0.58
CCA1	YER168C	BCH2	P36122	765 aa		11.42	□□□□□ -0.58
CCA1	YER168C	SPP381	P38282	291 aa	Predicted RBP	11.42	□□□□□ -0.58
CCA1	YER168C	RPN3	P40016	523 aa	Known RBP	11.42	□□□□□ -0.58
CCA1	YER168C	YNL320W	P42840	284 aa		11.42	□□□□□ -0.58
CCA1	YER168C	ESBP6	P53918	673 aa		11.42	□□□□□ -0.58
CCA1	YER168C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	11.42	□□□□□ -0.58	not detected
CCA1	YER168C	SYH1	Q02875	849 aa	Known RBP	11.42	□□□□□ -0.58
CCA1	YER168C	CUR1	Q06469	252 aa		11.42	□□□□□ -0.58
CCA1	YER168C	CBP1	P07252	654 aa		11.41	□□□□□ -0.58
CCA1	YER168C	SWI6	P09959	803 aa		11.41	□□□□□ -0.58
CCA1	YER168C	RAD18	P10862	487 aa		11.41	□□□□□ -0.58
CCA1	YER168C	HPR1	P17629	752 aa	Known RBP	11.41	□□□□□ -0.58
CCA1	YER168C	YKL050C	P35736	922 aa		11.41	□□□□□ -0.58
CCA1	YER168C	ACA1	P39970	489 aa		11.41	□□□□□ -0.58
CCA1	YER168C	NIT1	P40447	199 aa		11.41	□□□□□ -0.58
CCA1	YER168C	YMR018W	Q04364	514 aa		11.41	□□□□□ -0.58
CCA1	YER168C	TMA64	Q04600	565 aa	Known RBP	11.41	□□□□□ -0.58
CCA1	YER168C	RIO1	Q12196	484 aa	Known RBP	11.41	□□□□□ -0.58
CCA1	YER168C	PGK1	P00560	416 aa	Known RBP	11.4	□□□□□ -0.58
CCA1	YER168C	CHS2	P14180	963 aa		11.4	□□□□□ -0.58
CCA1	YER168C	NAM7	P30771	971 aa	Known RBP	11.4	□□□□□ -0.58
CCA1	YER168C	SEC8	P32855	1065 aa		11.4	□□□□□ -0.58
CCA1	YER168C	FIS1	P40515	155 aa		11.4	□□□□□ -0.58
CCA1	YER168C	TIM8	P57744	87 aa		11.4	□□□□□ -0.58
CCA1	YER168C	YML037C	Q03703	340 aa		11.4	□□□□□ -0.58
CCA1	YER168C	PHM6	Q05637	104 aa		11.4	□□□□□ -0.58
CCA1	YER168C	RLP24	Q07915	199 aa	Known RBP	11.4	□□□□□ -0.58
CCA1	YER168C	RAD54	P32863	898 aa		11.39	□□□□□ -0.59
CCA1	YER168C	BLI1	P35727	113 aa		11.39	□□□□□ -0.59
CCA1	YER168C	UBP13	P38187	747 aa		11.39	□□□□□ -0.59

Retrieved 100 of 5,963 RNA–protein pairs in 86.2 ms