RNA–Protein interactions for RNA: YER103W

SSA4, Transcript of Heat shock protein that is highly induced upon stress, yeast

Gene SSA4, Length 1,929 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSA4	YER103W	OXP1	P28273	1286 aa		13.64	□□□□□ -0.23
SSA4	YER103W	SMC1	P32908	1225 aa		13.64	□□□□□ -0.23
SSA4	YER103W	YKL133C	P36066	463 aa		13.64	□□□□□ -0.23
SSA4	YER103W	CDC27	P38042	758 aa		13.64	□□□□□ -0.23
SSA4	YER103W	RCK2	P38623	610 aa		13.64	□□□□□ -0.23
SSA4	YER103W	SDA1	P53313	767 aa	Known RBP	13.64	□□□□□ -0.23
SSA4	YER103W	GRX3	Q03835	250 aa		13.64	□□□□□ -0.23
SSA4	YER103W	AIM41	Q12032	185 aa		13.64	□□□□□ -0.23
SSA4	YER103W	THR4	P16120	514 aa	Known RBP	13.64	□□□□□ -0.23
SSA4	YER103W	PET10	P36139	283 aa		13.64	□□□□□ -0.23
SSA4	YER103W	TDA11	P38854	504 aa		13.64	□□□□□ -0.23
SSA4	YER103W	MPH1	P40562	993 aa		13.64	□□□□□ -0.23
SSA4	YER103W	SHE9	Q04172	456 aa		13.64	□□□□□ -0.23
SSA4	YER103W	NGR1	P32831	672 aa	Known RBP	13.63	□□□□□ -0.23
SSA4	YER103W	SER1	P33330	395 aa	Known RBP	13.63	□□□□□ -0.23
SSA4	YER103W	NIP100	P33420	868 aa		13.63	□□□□□ -0.23
SSA4	YER103W	SPL2	P38839	148 aa		13.63	□□□□□ -0.23
SSA4	YER103W	ATG36	P46983	293 aa		13.63	□□□□□ -0.23
SSA4	YER103W	UTP14	Q04500	899 aa	Known RBP	13.63	□□□□□ -0.23
SSA4	YER103W	CYB2	P00175	591 aa		13.62	□□□□□ -0.23
SSA4	YER103W	MIP1	P15801	1254 aa		13.62	□□□□□ -0.23
SSA4	YER103W	RIM8	P53179	542 aa		13.62	□□□□□ -0.23
SSA4	YER103W	YGR021W	P53212	290 aa		13.62	□□□□□ -0.23
SSA4	YER103W	YNL040W	P53960	456 aa	Predicted RBP	13.62	□□□□□ -0.23
SSA4	YER103W	VIP1	Q06685	1146 aa	Known RBP	13.62	□□□□□ -0.23
SSA4	YER103W	SPO21	Q12411	609 aa		13.62	□□□□□ -0.23
SSA4	YER103W	TUS1	Q06412	1307 aa		13.62	□□□□□ -0.23
SSA4	YER103W	SIN4	P32259	974 aa		13.62	□□□□□ -0.23
SSA4	YER103W	SIT1	P39980	628 aa		13.62	□□□□□ -0.23
SSA4	YER103W	SEC27	P41811	889 aa	Known RBP	13.62	□□□□□ -0.23
SSA4	YER103W	BRO1	P48582	844 aa		13.62	□□□□□ -0.23
SSA4	YER103W	MYO5	Q04439	1219 aa	Known RBP	13.62	□□□□□ -0.23
SSA4	YER103W	HFD1	Q04458	532 aa		13.62	□□□□□ -0.23
SSA4	YER103W	TYR1	P20049	452 aa		13.61	□□□□□ -0.23
SSA4	YER103W	VMA4	P22203	233 aa	Known RBP	13.61	□□□□□ -0.23
SSA4	YER103W	RIT1	P23796	513 aa		13.61	□□□□□ -0.23
SSA4	YER103W	SEC66	P33754	206 aa		13.61	□□□□□ -0.23
SSA4	YER103W	LHS1	P36016	881 aa		13.61	□□□□□ -0.23
SSA4	YER103W	YHL050C	P38721	697 aa		13.61	□□□□□ -0.23
SSA4	YER103W	IES2	P40154	320 aa		13.61	□□□□□ -0.23
SSA4	YER103W	TOS3	P43637	560 aa		13.61	□□□□□ -0.23
SSA4	YER103W	MPC54	Q08550	464 aa		13.61	□□□□□ -0.23
SSA4	YER103W	CIT1	P00890	479 aa		13.6	□□□□□ -0.23
SSA4	YER103W	PLC1	P32383	869 aa		13.6	□□□□□ -0.23
SSA4	YER103W	GCN20	P43535	752 aa	Known RBP	13.6	□□□□□ -0.23
SSA4	YER103W	TOS4	Q06266	489 aa		13.6	□□□□□ -0.23
SSA4	YER103W	ARG82	P07250	355 aa		13.6	□□□□□ -0.23
SSA4	YER103W	ADY4	Q05955	493 aa		13.6	□□□□□ -0.23
SSA4	YER103W	NUF2	P33895	451 aa		13.59	□□□□□ -0.23
SSA4	YER103W	DSF2	P38213	736 aa		13.59	□□□□□ -0.23
SSA4	YER103W	ECM2	P38241	364 aa	Known RBP	13.59	□□□□□ -0.23
SSA4	YER103W	SCS2	P40075	244 aa	Known RBP	13.59	□□□□□ -0.23
SSA4	YER103W	RTP1	Q12751	981 aa		13.59	□□□□□ -0.23
SSA4	YER103W	SIP5	P40210	489 aa	Known RBP	13.58	□□□□□ -0.23
SSA4	YER103W	AIM20	P40451	204 aa		13.58	□□□□□ -0.23
SSA4	YER103W	UTP6	Q02354	440 aa	Known RBP	13.58	□□□□□ -0.23
SSA4	YER103W	YMR187C	Q03236	431 aa		13.58	□□□□□ -0.23
SSA4	YER103W	TDA9	Q04545	1251 aa		13.58	□□□□□ -0.23
SSA4	YER103W	NDL1	Q06568	189 aa		13.58	□□□□□ -0.23
SSA4	YER103W	CLN3	P13365	580 aa		13.58	□□□□□ -0.24
SSA4	YER103W	YBL055C	P34220	418 aa	Predicted RBP	13.58	□□□□□ -0.24
SSA4	YER103W	RRP14	P36080	434 aa	Known RBP	13.58	□□□□□ -0.24
SSA4	YER103W	GPD2	P41911	440 aa	Known RBP	13.58	□□□□□ -0.24
SSA4	YER103W	SUM1	P46676	1062 aa		13.58	□□□□□ -0.24
SSA4	YER103W	INP52	P50942	1183 aa		13.58	□□□□□ -0.24
SSA4	YER103W	MCM6	P53091	1017 aa	Known RBP	13.58	□□□□□ -0.24
SSA4	YER103W	RET3	P53600	189 aa		13.58	□□□□□ -0.24
SSA4	YER103W	MDM1	Q01846	1127 aa		13.58	□□□□□ -0.24
SSA4	YER103W	GRE2	Q12068	342 aa	Known RBP	13.58	□□□□□ -0.24
SSA4	YER103W	CLF1	Q12309	687 aa	Predicted RBP	13.58	□□□□□ -0.24
SSA4	YER103W	MLS1	P30952	554 aa		13.57	□□□□□ -0.24
SSA4	YER103W	EFB1	P32471	206 aa	Known RBP	13.57	□□□□□ -0.24
SSA4	YER103W	VPS35	P34110	944 aa		13.57	□□□□□ -0.24
SSA4	YER103W	SEG2	P34250	1132 aa		13.57	□□□□□ -0.24
SSA4	YER103W	TOM71	P38825	639 aa	Known RBP	13.57	□□□□□ -0.24
SSA4	YER103W	EMW1	P42842	904 aa	Known RBP	13.57	□□□□□ -0.24
SSA4	YER103W	GTB1	Q04924	702 aa		13.57	□□□□□ -0.24
SSA4	YER103W	SMD2	Q06217	110 aa	Known RBP	13.57	□□□□□ -0.24
SSA4	YER103W	THI3	Q07471	609 aa		13.57	□□□□□ -0.24
SSA4	YER103W	MAK16	P10962	306 aa	Predicted RBP	13.56	□□□□□ -0.24
SSA4	YER103W	PDR1	P12383	1068 aa		13.56	□□□□□ -0.24
SSA4	YER103W	ISY1	P21374	235 aa	Predicted RBP	13.56	□□□□□ -0.24
SSA4	YER103W	GRX1	P25373	110 aa	Known RBP	13.56	□□□□□ -0.24
SSA4	YER103W	CBF2	P32504	956 aa		13.56	□□□□□ -0.24
SSA4	YER103W	LCP5	P40079	357 aa	Predicted RBP	13.56	□□□□□ -0.24
SSA4	YER103W	TSR1	Q07381	788 aa	Known RBP	13.56	□□□□□ -0.24
SSA4	YER103W	HAT1	Q12341	374 aa		13.56	□□□□□ -0.24
SSA4	YER103W	ENO2	P00925	437 aa	Known RBP	13.56	□□□□□ -0.24
SSA4	YER103W	PYC2	P32327	1180 aa	Known RBP	13.56	□□□□□ -0.24
SSA4	YER103W	GCD6	P32501	712 aa	Known RBP	13.56	□□□□□ -0.24
SSA4	YER103W	KAR9	P32526	644 aa		13.56	□□□□□ -0.24
SSA4	YER103W	ERP5	P38819	212 aa		13.56	□□□□□ -0.24
SSA4	YER103W	RAD16	P31244	790 aa		13.55	□□□□□ -0.24
SSA4	YER103W	BOI1	P38041	980 aa	Known RBP	13.55	□□□□□ -0.24
SSA4	YER103W	SAK1	P38990	1142 aa		13.55	□□□□□ -0.24
SSA4	YER103W	UBP5	P39944	805 aa		13.55	□□□□□ -0.24
SSA4	YER103W	LGE1	Q02796	332 aa	Known RBP	13.55	□□□□□ -0.24
SSA4	YER103W	NAT1	P12945	854 aa	Known RBP	13.54	□□□□□ -0.24
SSA4	YER103W	SNA3	P14359	133 aa		13.54	□□□□□ -0.24
SSA4	YER103W	PRO3	P32263	286 aa	Known RBP	13.54	□□□□□ -0.24

Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms