RNA–Protein interactions for RNA: YEL027W

VMA3, Transcript of Proteolipid subunit c of the V0 domain of vacuolar H(+)-ATPase, yeast

Gene VMA3, Length 483 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA3	YEL027W	CDC48	P25694	835 aa	Known RBP	7.16	□□□□□ -1.26
VMA3	YEL027W	GSY2	P27472	705 aa		7.16	□□□□□ -1.26
VMA3	YEL027W	BRE2	P43132	505 aa		7.16	□□□□□ -1.26
VMA3	YEL027W	RSC1	P53236	928 aa		7.16	□□□□□ -1.26
VMA3	YEL027W	DIP5	P53388	608 aa		7.16	□□□□□ -1.26
VMA3	YEL027W	YDR034W-B	Q6Q5X2	51 aa		7.16	□□□□□ -1.26
VMA3	YEL027W	SRD1	P09007	221 aa		7.15	□□□□□ -1.26
VMA3	YEL027W	PRP22	P24384	1145 aa	Known RBP	7.15	□□□□□ -1.26
VMA3	YEL027W	RAM2	P29703	316 aa		7.15	□□□□□ -1.26
VMA3	YEL027W	RKM3	P38222	552 aa		7.15	□□□□□ -1.26
VMA3	YEL027W	SIP3	P38717	1229 aa		7.15	□□□□□ -1.26
VMA3	YEL027W	FYV10	P40492	516 aa		7.15	□□□□□ -1.26
VMA3	YEL027W	FIS1	P40515	155 aa		7.15	□□□□□ -1.26
VMA3	YEL027W	SEC5	P89102	971 aa		7.15	□□□□□ -1.26
VMA3	YEL027W	LCD1	Q04377	747 aa		7.15	□□□□□ -1.26
VMA3	YEL027W	ATE1	P16639	503 aa		7.14	□□□□□ -1.27
VMA3	YEL027W	EFT1	P32324	842 aa	Known RBP	7.14	□□□□□ -1.27
VMA3	YEL027W	PIH1	P38768	344 aa		7.14	□□□□□ -1.27
VMA3	YEL027W	RPN3	P40016	523 aa	Known RBP	7.14	□□□□□ -1.27
VMA3	YEL027W	SAD1	P43589	448 aa		7.14	□□□□□ -1.27
VMA3	YEL027W	GUP1	P53154	560 aa		7.14	□□□□□ -1.27
VMA3	YEL027W	SKY1	Q03656	742 aa		7.14	□□□□□ -1.27
VMA3	YEL027W	TLG2	Q08144	397 aa		7.14	□□□□□ -1.27
VMA3	YEL027W	SMC5	Q08204	1093 aa		7.14	□□□□□ -1.27
VMA3	YEL027W	RIF1	P29539	1916 aa		7.13	□□□□□ -1.27
VMA3	YEL027W	PFK1	P16861	987 aa	Known RBP	7.13	□□□□□ -1.27
VMA3	YEL027W	DRE2	P36152	348 aa		7.13	□□□□□ -1.27
VMA3	YEL027W	BCD1	P38772	366 aa		7.13	□□□□□ -1.27
VMA3	YEL027W	EAF5	P39995	279 aa		7.13	□□□□□ -1.27
VMA3	YEL027W	ULP2	P40537	1034 aa	Predicted RBP	7.13	□□□□□ -1.27
VMA3	YEL027W	TFG2	P41896	400 aa	Predicted RBP	7.13	□□□□□ -1.27
VMA3	YEL027W	ACF4	P47129	309 aa		7.13	□□□□□ -1.27
VMA3	YEL027W	HIF1	Q12373	385 aa		7.13	□□□□□ -1.27
VMA3	YEL027W	DED1	P06634	604 aa	Known RBP	7.12	□□□□□ -1.27
VMA3	YEL027W	SPT2	P06843	333 aa	Predicted RBP	7.12	□□□□□ -1.27
VMA3	YEL027W	TCP1	P12612	559 aa	Known RBP	7.12	□□□□□ -1.27
VMA3	YEL027W	BUD2	P33314	1104 aa		7.12	□□□□□ -1.27
VMA3	YEL027W	ATG19	P35193	415 aa		7.12	□□□□□ -1.27
VMA3	YEL027W	ADE17	P38009	592 aa	Known RBP	7.12	□□□□□ -1.27
VMA3	YEL027W	PPS1	P38148	807 aa		7.12	□□□□□ -1.27
VMA3	YEL027W	MUK1	Q02866	612 aa		7.12	□□□□□ -1.27
VMA3	YEL027W	EMI2	Q04409	500 aa	Known RBP	7.12	□□□□□ -1.27
VMA3	YEL027W	HCR1	Q05775	265 aa	Known RBP	7.12	□□□□□ -1.27
VMA3	YEL027W	COQ9	Q05779	260 aa		7.12	□□□□□ -1.27
VMA3	YEL027W	MAG2	Q06436	670 aa	Known RBP	7.12	□□□□□ -1.27
VMA3	YEL027W	AFT2	Q08957	416 aa		7.12	□□□□□ -1.27
VMA3	YEL027W	HFI1	Q12060	488 aa		7.12	□□□□□ -1.27
VMA3	YEL027W	NCR1	Q12200	1170 aa		7.12	□□□□□ -1.27
VMA3	YEL027W	MSD1	P15179	658 aa	Known RBP	7.11	□□□□□ -1.27
VMA3	YEL027W	MRPL10	P36520	322 aa		7.11	□□□□□ -1.27
VMA3	YEL027W	YHR131C	P38835	850 aa		7.11	□□□□□ -1.27
VMA3	YEL027W	YFL034W	P43564	1073 aa		7.11	□□□□□ -1.27
VMA3	YEL027W	JJJ3	P47138	172 aa		7.11	□□□□□ -1.27
VMA3	YEL027W	YGR237C	P50089	785 aa		7.11	□□□□□ -1.27
VMA3	YEL027W	NCS2	P53923	493 aa	Predicted RBP	7.11	□□□□□ -1.27
VMA3	YEL027W	ROD1	Q02805	837 aa		7.11	□□□□□ -1.27
VMA3	YEL027W	GFD1	Q04839	188 aa	Known RBP	7.11	□□□□□ -1.27
VMA3	YEL027W	SPP382	Q06411	708 aa	Predicted RBP	7.11	□□□□□ -1.27
VMA3	YEL027W	PCK1	P10963	549 aa		7.1	□□□□□ -1.27
VMA3	YEL027W	WHI2	P12611	486 aa		7.1	□□□□□ -1.27
VMA3	YEL027W	IDI1	P15496	288 aa		7.1	□□□□□ -1.27
VMA3	YEL027W	YKL091C	P33324	310 aa	Known RBP	7.1	□□□□□ -1.27
VMA3	YEL027W	PGM2	P37012	569 aa	Known RBP	7.1	□□□□□ -1.27
VMA3	YEL027W	UBP13	P38187	747 aa		7.1	□□□□□ -1.27
VMA3	YEL027W	FMP10	P40098	244 aa		7.1	□□□□□ -1.27
VMA3	YEL027W	OPT1	P40897	799 aa		7.1	□□□□□ -1.27
VMA3	YEL027W	TCB2	P48231	1178 aa		7.1	□□□□□ -1.27
VMA3	YEL027W	GCV2	P49095	1034 aa		7.1	□□□□□ -1.27
VMA3	YEL027W	VID30	P53076	958 aa		7.1	□□□□□ -1.27
VMA3	YEL027W	MET13	P53128	600 aa		7.1	□□□□□ -1.27
VMA3	YEL027W	SSL2	Q00578	843 aa		7.1	□□□□□ -1.27
VMA3	YEL027W	HEH2	Q03281	663 aa		7.1	□□□□□ -1.27
VMA3	YEL027W	CUR1	Q06469	252 aa		7.1	□□□□□ -1.27
VMA3	YEL027W	YPL277C	Q08989	487 aa		7.1	□□□□□ -1.27
VMA3	YEL027W	TIF1	P10081	395 aa	Known RBP	7.09	□□□□□ -1.27
VMA3	YEL027W	OM45	P16547	393 aa		7.09	□□□□□ -1.27
VMA3	YEL027W	DBP5	P20449	482 aa	Known RBP	7.09	□□□□□ -1.27
VMA3	YEL027W	VPS35	P34110	944 aa		7.09	□□□□□ -1.27
VMA3	YEL027W	MIC60	P36112	540 aa		7.09	□□□□□ -1.27
VMA3	YEL027W	SLX1	P38324	304 aa		7.09	□□□□□ -1.27
VMA3	YEL027W	HUL4	P40985	892 aa		7.09	□□□□□ -1.27
VMA3	YEL027W	TOF1	P53840	1238 aa		7.09	□□□□□ -1.27
VMA3	YEL027W	ARK1	P53974	638 aa		7.09	□□□□□ -1.27
VMA3	YEL027W	EBS1	Q03466	884 aa	Known RBP	7.09	□□□□□ -1.27
VMA3	YEL027W	WAR1	Q03631	944 aa		7.09	□□□□□ -1.27
VMA3	YEL027W	YDL057W	Q07379	328 aa		7.09	□□□□□ -1.27
VMA3	YEL027W	NOC3	Q07896	663 aa	Predicted RBP	7.09	□□□□□ -1.27
VMA3	YEL027W	TCO89	Q08921	799 aa		7.09	□□□□□ -1.27
VMA3	YEL027W	CDC37	P06101	506 aa	Known RBP	7.08	□□□□□ -1.28
VMA3	YEL027W	MAK16	P10962	306 aa	Predicted RBP	7.08	□□□□□ -1.28
VMA3	YEL027W	POL3	P15436	1097 aa		7.08	□□□□□ -1.28
VMA3	YEL027W	RPC53	P25441	422 aa		7.08	□□□□□ -1.28
VMA3	YEL027W	MRC1	P25588	1096 aa		7.08	□□□□□ -1.28
VMA3	YEL027W	PSO2	P30620	661 aa		7.08	□□□□□ -1.28
VMA3	YEL027W	MRF1	P30775	413 aa	Predicted RBP	7.08	□□□□□ -1.28
VMA3	YEL027W	COT1	P32798	439 aa		7.08	□□□□□ -1.28
VMA3	YEL027W	MPE1	P35728	441 aa	Known RBP	7.08	□□□□□ -1.28
VMA3	YEL027W	SAP190	P36123	1033 aa		7.08	□□□□□ -1.28
VMA3	YEL027W	PSY4	P38193	441 aa		7.08	□□□□□ -1.28
VMA3	YEL027W	AIP1	P46680	615 aa	Known RBP	7.08	□□□□□ -1.28

Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms