RNA–Protein interactions for RNA: YDR012W

RPL4B, Transcript of Ribosomal 60S subunit protein L4B, yeast

Gene RPL4B, Length 1,089 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPL4B	YDR012W	SAC6	P32599	642 aa	Known RBP	10.85	□□□□□ -0.67
RPL4B	YDR012W	POA1	P38218	177 aa		10.85	□□□□□ -0.67
RPL4B	YDR012W	SNF7	P39929	240 aa	Known RBP	10.85	□□□□□ -0.67
RPL4B	YDR012W	SAD1	P43589	448 aa		10.85	□□□□□ -0.67
RPL4B	YDR012W	AVT1	P47082	602 aa		10.85	□□□□□ -0.67
RPL4B	YDR012W	TOF1	P53840	1238 aa		10.85	□□□□□ -0.67
RPL4B	YDR012W	CUR1	Q06469	252 aa		10.85	□□□□□ -0.67
RPL4B	YDR012W	RIF1	P29539	1916 aa		10.85	□□□□□ -0.67
RPL4B	YDR012W	DPH2	P32461	534 aa		10.84	□□□□□ -0.67
RPL4B	YDR012W	DRE2	P36152	348 aa		10.84	□□□□□ -0.67
RPL4B	YDR012W	PGM2	P37012	569 aa	Known RBP	10.84	□□□□□ -0.67
RPL4B	YDR012W	RSM25	P40496	264 aa		10.84	□□□□□ -0.67
RPL4B	YDR012W	YFL034W	P43564	1073 aa		10.84	□□□□□ -0.67
RPL4B	YDR012W	YPT11	P48559	417 aa		10.84	□□□□□ -0.67
RPL4B	YDR012W	CAF130	P53280	1122 aa	Predicted RBP	10.84	□□□□□ -0.67
RPL4B	YDR012W	TPO2	P53283	614 aa		10.84	□□□□□ -0.67
RPL4B	YDR012W	HAP5	Q02516	242 aa		10.84	□□□□□ -0.67
RPL4B	YDR012W	IES4	Q08561	116 aa		10.84	□□□□□ -0.67
RPL4B	YDR012W	AHC1	Q12433	566 aa		10.84	□□□□□ -0.67
RPL4B	YDR012W	AIM44	Q99299	758 aa		10.84	□□□□□ -0.67
RPL4B	YDR012W	HIP1	P06775	603 aa		10.83	□□□□□ -0.68
RPL4B	YDR012W	TMT1	P32643	299 aa		10.83	□□□□□ -0.68
RPL4B	YDR012W	YSC83	P32792	385 aa		10.83	□□□□□ -0.68
RPL4B	YDR012W	JHD1	P40034	492 aa		10.83	□□□□□ -0.68
RPL4B	YDR012W	YGR035C	P53222	116 aa		10.83	□□□□□ -0.68
RPL4B	YDR012W	ARK1	P53974	638 aa		10.83	□□□□□ -0.68
RPL4B	YDR012W	MUK1	Q02866	612 aa		10.83	□□□□□ -0.68
RPL4B	YDR012W	SKY1	Q03656	742 aa		10.83	□□□□□ -0.68
RPL4B	YDR012W	TLG2	Q08144	397 aa		10.83	□□□□□ -0.68
RPL4B	YDR012W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	10.82	□□□□□ -0.68	not detected
RPL4B	YDR012W	SKG6	P32900	734 aa	Predicted RBP	10.82	□□□□□ -0.68
RPL4B	YDR012W	ERC1	P38767	581 aa		10.82	□□□□□ -0.68
RPL4B	YDR012W	YER130C	P39959	443 aa		10.82	□□□□□ -0.68
RPL4B	YDR012W	DJP1	P40564	432 aa		10.82	□□□□□ -0.68
RPL4B	YDR012W	CIR1	P42940	261 aa		10.82	□□□□□ -0.68
RPL4B	YDR012W	RSC8	P43609	557 aa	Known RBP	10.82	□□□□□ -0.68
RPL4B	YDR012W	ALT2	P52892	507 aa		10.82	□□□□□ -0.68
RPL4B	YDR012W	MCM6	P53091	1017 aa	Known RBP	10.82	□□□□□ -0.68
RPL4B	YDR012W	CUL3	P53202	744 aa		10.82	□□□□□ -0.68
RPL4B	YDR012W	YNL146W	P53906	100 aa		10.82	□□□□□ -0.68
RPL4B	YDR012W	YNL134C	P53912	376 aa	Known RBP	10.82	□□□□□ -0.68
RPL4B	YDR012W	YPL277C	Q08989	487 aa		10.82	□□□□□ -0.68
RPL4B	YDR012W	APC11	Q12157	165 aa		10.82	□□□□□ -0.68
RPL4B	YDR012W	GCV2	P49095	1034 aa		10.81	□□□□□ -0.68
RPL4B	YDR012W	SHE10	P53075	577 aa		10.81	□□□□□ -0.68
RPL4B	YDR012W	VMS1	Q04311	632 aa	Known RBP	10.81	□□□□□ -0.68
RPL4B	YDR012W	YDL057W	Q07379	328 aa		10.81	□□□□□ -0.68
RPL4B	YDR012W	GPA1	P08539	472 aa		10.8	□□□□□ -0.68
RPL4B	YDR012W	PHO8	P11491	566 aa		10.8	□□□□□ -0.68
RPL4B	YDR012W	NAM7	P30771	971 aa	Known RBP	10.8	□□□□□ -0.68
RPL4B	YDR012W	MRF1	P30775	413 aa	Predicted RBP	10.8	□□□□□ -0.68
RPL4B	YDR012W	CCM1	P48237	864 aa	Predicted RBP	10.8	□□□□□ -0.68
RPL4B	YDR012W	VID30	P53076	958 aa		10.8	□□□□□ -0.68
RPL4B	YDR012W	VTC3	Q02725	835 aa		10.8	□□□□□ -0.68
RPL4B	YDR012W	YDR090C	Q03193	310 aa		10.8	□□□□□ -0.68
RPL4B	YDR012W	MAG2	Q06436	670 aa	Known RBP	10.8	□□□□□ -0.68
RPL4B	YDR012W	PCD1	Q12524	340 aa		10.8	□□□□□ -0.68
RPL4B	YDR012W	ADE2	P21264	571 aa	Known RBP	10.79	□□□□□ -0.68
RPL4B	YDR012W	CAD1	P24813	409 aa	Known RBP	10.79	□□□□□ -0.68
RPL4B	YDR012W	VID24	P38263	362 aa		10.79	□□□□□ -0.68
RPL4B	YDR012W	LAM5	P43560	674 aa		10.79	□□□□□ -0.68
RPL4B	YDR012W	TAM41	P53230	385 aa		10.79	□□□□□ -0.68
RPL4B	YDR012W	ECM7	Q06200	448 aa		10.79	□□□□□ -0.68
RPL4B	YDR012W	RPL17A	P05740	184 aa	Known RBP	10.78	□□□□□ -0.68
RPL4B	YDR012W	TIF1	P10081	395 aa	Known RBP	10.78	□□□□□ -0.68
RPL4B	YDR012W	OM45	P16547	393 aa		10.78	□□□□□ -0.68
RPL4B	YDR012W	MSP1	P28737	362 aa		10.78	□□□□□ -0.68
RPL4B	YDR012W	MNN4	P36044	1178 aa		10.78	□□□□□ -0.68
RPL4B	YDR012W	YAP1801	P38856	637 aa		10.78	□□□□□ -0.68
RPL4B	YDR012W	RPL17B	P46990	184 aa	Known RBP	10.78	□□□□□ -0.68
RPL4B	YDR012W	NBP1	P52919	319 aa	Predicted RBP	10.78	□□□□□ -0.68
RPL4B	YDR012W	MNP1	P53163	194 aa	Predicted RBP	10.78	□□□□□ -0.68
RPL4B	YDR012W	DOT1	Q04089	582 aa	Known RBP	10.78	□□□□□ -0.68
RPL4B	YDR012W	MED1	Q12321	566 aa		10.78	□□□□□ -0.68
RPL4B	YDR012W	DAL7	P21826	554 aa		10.77	□□□□□ -0.69
RPL4B	YDR012W	YKL091C	P33324	310 aa	Known RBP	10.77	□□□□□ -0.69
RPL4B	YDR012W	MRX3	P38172	270 aa		10.77	□□□□□ -0.69
RPL4B	YDR012W	RVS167	P39743	482 aa	Known RBP	10.77	□□□□□ -0.69
RPL4B	YDR012W	BIM1	P40013	344 aa		10.77	□□□□□ -0.69
RPL4B	YDR012W	ESL1	P40456	1118 aa		10.77	□□□□□ -0.69
RPL4B	YDR012W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	10.77	□□□□□ -0.69	not detected
RPL4B	YDR012W	EAF7	P53911	425 aa	Known RBP	10.77	□□□□□ -0.69
RPL4B	YDR012W	MSD1	P15179	658 aa	Known RBP	10.76	□□□□□ -0.69
RPL4B	YDR012W	YKR023W	P36119	530 aa	Known RBP	10.76	□□□□□ -0.69
RPL4B	YDR012W	YHL026C	P38740	315 aa		10.76	□□□□□ -0.69
RPL4B	YDR012W	RRM3	P38766	723 aa		10.76	□□□□□ -0.69
RPL4B	YDR012W	HUL4	P40985	892 aa		10.76	□□□□□ -0.69
RPL4B	YDR012W	SPP382	Q06411	708 aa	Predicted RBP	10.76	□□□□□ -0.69
RPL4B	YDR012W	TCO89	Q08921	799 aa		10.76	□□□□□ -0.69
RPL4B	YDR012W	TRS33	Q99394	268 aa		10.76	□□□□□ -0.69
RPL4B	YDR012W	UBR2	Q07963	1872 aa		10.76	□□□□□ -0.69
RPL4B	YDR012W	GLN3	P18494	730 aa		10.75	□□□□□ -0.69
RPL4B	YDR012W	IME2	P32581	645 aa		10.75	□□□□□ -0.69
RPL4B	YDR012W	YEL1	P34225	687 aa		10.75	□□□□□ -0.69
RPL4B	YDR012W	MMS4	P38257	691 aa		10.75	□□□□□ -0.69
RPL4B	YDR012W	UBX7	P38349	436 aa		10.75	□□□□□ -0.69
RPL4B	YDR012W	ISM1	P48526	1002 aa		10.75	□□□□□ -0.69
RPL4B	YDR012W	ENV11	P53246	860 aa		10.75	□□□□□ -0.69
RPL4B	YDR012W	YVH1	Q02256	364 aa	Known RBP	10.75	□□□□□ -0.69
RPL4B	YDR012W	TRS130	Q03660	1102 aa		10.75	□□□□□ -0.69

Retrieved 100 of 5,963 RNA–protein pairs in 370.3 ms