RNA–Protein interactions for RNA: YCR088W

ABP1, Transcript of Actin-binding protein of the cortical actin cytoskeleton, yeastyeast

Gene ABP1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABP1YCR088W SUL1P38359 859 aa8.57□□□□□ -1.04
ABP1YCR088W CCT2P39076 527 aaKnown RBP8.57□□□□□ -1.04
ABP1YCR088W YDR278CQ05612 105 aa8.57□□□□□ -1.04
ABP1YCR088W KTR2P33550 425 aa8.56□□□□□ -1.04
ABP1YCR088W MRX1P40050 688 aa8.56□□□□□ -1.04
ABP1YCR088W ROG3P43602 733 aa8.56□□□□□ -1.04
ABP1YCR088W NMD5P46970 1048 aa8.56□□□□□ -1.04
ABP1YCR088W ATG36P46983 293 aa8.56□□□□□ -1.04
ABP1YCR088W UTP4Q06679 776 aaKnown RBP8.56□□□□□ -1.04
ABP1YCR088W CSR1Q06705 408 aaKnown RBP8.56□□□□□ -1.04
ABP1YCR088W YDL124WQ07551 312 aaKnown RBP8.56□□□□□ -1.04
ABP1YCR088W ISW1P38144 1129 aa8.56□□□□□ -1.04
ABP1YCR088W YSW1P38280 609 aa8.56□□□□□ -1.04
ABP1YCR088W PAN5P38787 379 aa8.56□□□□□ -1.04
ABP1YCR088W NUP82P40368 713 aa8.56□□□□□ -1.04
ABP1YCR088W RPC17P47076 161 aa8.56□□□□□ -1.04
ABP1YCR088W YGR021WP53212 290 aa8.56□□□□□ -1.04
ABP1YCR088W MFM1Q02783 413 aa8.56□□□□□ -1.04
ABP1YCR088W USA1Q03714 838 aa8.56□□□□□ -1.04
ABP1YCR088W PCL8Q08966 492 aa8.56□□□□□ -1.04
ABP1YCR088W SRO9P25567 434 aaKnown RBP8.55□□□□□ -1.04
ABP1YCR088W OAF3P36023 863 aa8.55□□□□□ -1.04
ABP1YCR088W RIM8P53179 542 aa8.55□□□□□ -1.04
ABP1YCR088W DIP5P53388 608 aa8.55□□□□□ -1.04
ABP1YCR088W FUS2Q05670 677 aa8.55□□□□□ -1.04
ABP1YCR088W ACK1Q07622 623 aaPredicted RBP8.55□□□□□ -1.04
ABP1YCR088W PGM2P37012 569 aaKnown RBP8.54□□□□□ -1.04
ABP1YCR088W RCK2P38623 610 aa8.54□□□□□ -1.04
ABP1YCR088W PNP1Q05788 311 aa8.54□□□□□ -1.04
ABP1YCR088W PIG1Q06216 648 aa8.54□□□□□ -1.04
ABP1YCR088W MED1Q12321 566 aa8.54□□□□□ -1.04
ABP1YCR088W SPO21Q12411 609 aa8.54□□□□□ -1.04
ABP1YCR088W ARG1P22768 420 aa8.53□□□□□ -1.04
ABP1YCR088W YKL050CP35736 922 aa8.53□□□□□ -1.04
ABP1YCR088W LCP5P40079 357 aaPredicted RBP8.53□□□□□ -1.04
ABP1YCR088W SDS3P40505 327 aa8.53□□□□□ -1.04
ABP1YCR088W PXA1P41909 870 aa8.53□□□□□ -1.04
ABP1YCR088W YJR039WP47107 1121 aa8.53□□□□□ -1.04
ABP1YCR088W BRO1P48582 844 aa8.53□□□□□ -1.04
ABP1YCR088W ORC4P54791 529 aa8.53□□□□□ -1.04
ABP1YCR088W UBP3Q01477 912 aaKnown RBP RIP-Chip data8.53□□□□□ -1.04 RIP-Chip
ABP1YCR088W HOT1Q03213 719 aa8.53□□□□□ -1.04
ABP1YCR088W TAF9Q05027 157 aa8.53□□□□□ -1.04
ABP1YCR088W YLR297WQ05899 129 aa8.53□□□□□ -1.04
ABP1YCR088W JIP3O13555 125 aa8.53□□□□□ -1.04
ABP1YCR088W SUP45P12385 437 aaKnown RBP8.53□□□□□ -1.04
ABP1YCR088W PMR1P13586 950 aa8.53□□□□□ -1.04
ABP1YCR088W KAP123P40069 1113 aaKnown RBP8.53□□□□□ -1.04
ABP1YCR088W SMX2P40204 77 aaKnown RBP8.53□□□□□ -1.04
ABP1YCR088W YJL171CP46992 396 aa8.53□□□□□ -1.04
ABP1YCR088W GIR2Q03768 265 aaPredicted RBP8.53□□□□□ -1.04
ABP1YCR088W YPL277CQ08989 487 aa8.53□□□□□ -1.04
ABP1YCR088W AIM41Q12032 185 aa8.53□□□□□ -1.04
ABP1YCR088W RIO1Q12196 484 aaKnown RBP8.53□□□□□ -1.04
ABP1YCR088W RNA1P11745 407 aaKnown RBP8.52□□□□□ -1.05
ABP1YCR088W KIN1P13185 1064 aa8.52□□□□□ -1.05
ABP1YCR088W PDB1P32473 366 aaKnown RBP8.52□□□□□ -1.05
ABP1YCR088W AFG2P32794 780 aa8.52□□□□□ -1.05
ABP1YCR088W YGL015CP33199 130 aa8.52□□□□□ -1.05
ABP1YCR088W UBC6P33296 250 aaPredicted RBP8.52□□□□□ -1.05
ABP1YCR088W URB2P47108 1174 aa8.52□□□□□ -1.05
ABP1YCR088W FMS1P50264 508 aa8.52□□□□□ -1.05
ABP1YCR088W LSB1P53281 241 aa8.52□□□□□ -1.05
ABP1YCR088W ADA2Q02336 434 aa8.52□□□□□ -1.05
ABP1YCR088W TDA9Q04545 1251 aa8.52□□□□□ -1.05
ABP1YCR088W LAP2Q10740 671 aa8.52□□□□□ -1.05
ABP1YCR088W RRG1Q12167 365 aaPredicted RBP8.52□□□□□ -1.05
ABP1YCR088W ARP6Q12509 438 aa8.52□□□□□ -1.05
ABP1YCR088W SPT2P06843 333 aaPredicted RBP8.51□□□□□ -1.05
ABP1YCR088W ICL1P28240 557 aaPredicted RBP8.51□□□□□ -1.05
ABP1YCR088W MRF1P30775 413 aaPredicted RBP8.51□□□□□ -1.05
ABP1YCR088W GCD6P32501 712 aaKnown RBP8.51□□□□□ -1.05
ABP1YCR088W HEL1P36113 551 aa8.51□□□□□ -1.05
ABP1YCR088W YBL028CP38202 106 aa8.51□□□□□ -1.05
ABP1YCR088W HXT8P40886 569 aa8.51□□□□□ -1.05
ABP1YCR088W LCB2P40970 561 aa8.51□□□□□ -1.05
ABP1YCR088W SGM1P47166 707 aa8.51□□□□□ -1.05
ABP1YCR088W ZPR1P53303 486 aaKnown RBP8.51□□□□□ -1.05
ABP1YCR088W ARK1P53974 638 aa8.51□□□□□ -1.05
ABP1YCR088W SEC5P89102 971 aa8.51□□□□□ -1.05
ABP1YCR088W TSR1Q07381 788 aaKnown RBP8.51□□□□□ -1.05
ABP1YCR088W YLR462WO13556 202 aa8.5□□□□□ -1.05
ABP1YCR088W KAR3P17119 729 aa8.5□□□□□ -1.05
ABP1YCR088W ADP1P25371 1049 aa8.5□□□□□ -1.05
ABP1YCR088W YCR051WP25631 222 aa8.5□□□□□ -1.05
ABP1YCR088W PWP2P25635 923 aaKnown RBP8.5□□□□□ -1.05
ABP1YCR088W GPI10P30777 616 aa8.5□□□□□ -1.05
ABP1YCR088W VPS35P34110 944 aa8.5□□□□□ -1.05
ABP1YCR088W TRZ1P36159 838 aaPredicted RBP8.5□□□□□ -1.05
ABP1YCR088W ERT1P38140 529 aa8.5□□□□□ -1.05
ABP1YCR088W CST26P38226 397 aa8.5□□□□□ -1.05
ABP1YCR088W YBR062CP38239 180 aa8.5□□□□□ -1.05
ABP1YCR088W YHL049CP38722 271 aa8.5□□□□□ -1.05
ABP1YCR088W PES4P39684 611 aa8.5□□□□□ -1.05
ABP1YCR088W YEL075CP39972 122 aa8.5□□□□□ -1.05
ABP1YCR088W YER189WP40104 122 aa8.5□□□□□ -1.05
ABP1YCR088W YFL064CP43540 174 aa8.5□□□□□ -1.05
ABP1YCR088W YMR1P47147 688 aaKnown RBP RIP-Chip data8.5□□□□□ -1.05not detected
ABP1YCR088W SYH1Q02875 849 aaKnown RBP8.5□□□□□ -1.05
ABP1YCR088W YMR187CQ03236 431 aa8.5□□□□□ -1.05
Retrieved 100 of 5,963 RNA–protein pairs in 190.8 ms