RNA–Protein interactions for RNA: YAL030W

SNC1, Transcript of Vesicle membrane receptor protein (v-SNARE), yeastyeast

Gene SNC1, Length 354 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum, Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNC1YAL030W PHR1P05066 565 aaKnown RBP RIP-Chip data2.66□□□□□ -1.98not detected
SNC1YAL030W ATP4P05626 244 aa2.66□□□□□ -1.98
SNC1YAL030W MPH2P0CD99 609 aa2.66□□□□□ -1.98
SNC1YAL030W RPS4AP0CX35 261 aaKnown RBP2.66□□□□□ -1.98
SNC1YAL030W RPS4BP0CX36 261 aaKnown RBP2.66□□□□□ -1.98
SNC1YAL030W RSC6P25632 483 aa2.66□□□□□ -1.98
SNC1YAL030W CDC48P25694 835 aaKnown RBP2.66□□□□□ -1.98
SNC1YAL030W SEC6P32844 805 aa2.66□□□□□ -1.98
SNC1YAL030W SWE1P32944 819 aa2.66□□□□□ -1.98
SNC1YAL030W GPT2P36148 743 aa2.66□□□□□ -1.98
SNC1YAL030W GIC1P38785 314 aa2.66□□□□□ -1.98
SNC1YAL030W GPP1P41277 250 aaKnown RBP2.66□□□□□ -1.98
SNC1YAL030W DUG1P43616 481 aaKnown RBP2.66□□□□□ -1.98
SNC1YAL030W TY4A-JP47023 414 aa2.66□□□□□ -1.98
SNC1YAL030W NSG2P53898 299 aa2.66□□□□□ -1.98
SNC1YAL030W COG6P53959 839 aa2.66□□□□□ -1.98
SNC1YAL030W ALO1P54783 526 aaKnown RBP2.66□□□□□ -1.98
SNC1YAL030W SNP1Q00916 300 aaPredicted RBP2.66□□□□□ -1.98
SNC1YAL030W SRT1Q03175 343 aa2.66□□□□□ -1.98
SNC1YAL030W CEF1Q03654 590 aaPredicted RBP2.66□□□□□ -1.98
SNC1YAL030W TPP1Q03796 238 aa2.66□□□□□ -1.98
SNC1YAL030W RSC3Q06639 885 aa2.66□□□□□ -1.98
SNC1YAL030W TRE2Q08693 809 aa2.66□□□□□ -1.98
SNC1YAL030W PUS1Q12211 544 aaKnown RBP2.66□□□□□ -1.98
SNC1YAL030W BI4P03879 638 aa2.65□□□□□ -1.99
SNC1YAL030W SFL1P20134 766 aa2.65□□□□□ -1.99
SNC1YAL030W ACE2P21192 770 aa2.65□□□□□ -1.99
SNC1YAL030W PWP2P25635 923 aaKnown RBP2.65□□□□□ -1.99
SNC1YAL030W EUG1P32474 517 aa2.65□□□□□ -1.99
SNC1YAL030W HOG1P32485 435 aa2.65□□□□□ -1.99
SNC1YAL030W MDL2P33311 773 aa2.65□□□□□ -1.99
SNC1YAL030W MCD4P36051 919 aa2.65□□□□□ -1.99
SNC1YAL030W VPS24P36095 224 aaKnown RBP2.65□□□□□ -1.99
SNC1YAL030W TRZ1P36159 838 aaPredicted RBP2.65□□□□□ -1.99
SNC1YAL030W TYS1P36421 394 aaKnown RBP2.65□□□□□ -1.99
SNC1YAL030W ERT1P38140 529 aa2.65□□□□□ -1.99
SNC1YAL030W YBR071WP38243 211 aa2.65□□□□□ -1.99
SNC1YAL030W PCM1P38628 557 aaKnown RBP2.65□□□□□ -1.99
SNC1YAL030W CKB2P38930 258 aa2.65□□□□□ -1.99
SNC1YAL030W GZF3P42944 551 aaKnown RBP2.65□□□□□ -1.99
SNC1YAL030W JSN1P47135 1091 aaKnown RBP RIP-Chip data2.65□□□□□ -1.99not detected
SNC1YAL030W YJR096WP47137 282 aa2.65□□□□□ -1.99
SNC1YAL030W MTC3P53077 123 aa2.65□□□□□ -1.99
SNC1YAL030W MTQ2Q03920 221 aaPredicted RBP2.65□□□□□ -1.99
SNC1YAL030W YDR514CQ04408 483 aa2.65□□□□□ -1.99
SNC1YAL030W NBA1Q08229 501 aaKnown RBP2.65□□□□□ -1.99
SNC1YAL030W YOR059CQ08448 450 aaKnown RBP2.65□□□□□ -1.99
SNC1YAL030W MET7Q08645 548 aa2.65□□□□□ -1.99
SNC1YAL030W SLX4Q12098 748 aa2.65□□□□□ -1.99
SNC1YAL030W RAD18P10862 487 aa2.64□□□□□ -1.99
SNC1YAL030W SAM35P14693 329 aa2.64□□□□□ -1.99
SNC1YAL030W MCX1P38323 520 aaPredicted RBP2.64□□□□□ -1.99
SNC1YAL030W YHL012WP38709 493 aa2.64□□□□□ -1.99
SNC1YAL030W BOI2P39969 1040 aa2.64□□□□□ -1.99
SNC1YAL030W NPP2P39997 493 aa2.64□□□□□ -1.99
SNC1YAL030W NIT1P40447 199 aa2.64□□□□□ -1.99
SNC1YAL030W YFL054CP43549 646 aa2.64□□□□□ -1.99
SNC1YAL030W YJR120WP47157 116 aa2.64□□□□□ -1.99
SNC1YAL030W ARI1P53111 347 aaKnown RBP2.64□□□□□ -1.99
SNC1YAL030W PEX14P53112 341 aa2.64□□□□□ -1.99
SNC1YAL030W MET13P53128 600 aa2.64□□□□□ -1.99
SNC1YAL030W BUD9P53226 547 aa2.64□□□□□ -1.99
SNC1YAL030W YNR014WP53719 212 aa2.64□□□□□ -1.99
SNC1YAL030W NOG2P53742 486 aaKnown RBP2.64□□□□□ -1.99
SNC1YAL030W VMS1Q04311 632 aaKnown RBP2.64□□□□□ -1.99
SNC1YAL030W ATG33Q06485 197 aa2.64□□□□□ -1.99
SNC1YAL030W GUD1Q07729 489 aa2.64□□□□□ -1.99
SNC1YAL030W RSC58Q07979 502 aa2.64□□□□□ -1.99
SNC1YAL030W GUP2Q08929 609 aa2.64□□□□□ -1.99
SNC1YAL030W YTM1Q12024 460 aaPredicted RBP2.64□□□□□ -1.99
SNC1YAL030W YVC1Q12324 675 aa2.64□□□□□ -1.99
SNC1YAL030W HMG1P12683 1054 aa2.63□□□□□ -1.99
SNC1YAL030W AEP2P22136 580 aa2.63□□□□□ -1.99
SNC1YAL030W DPB3P27344 201 aa2.63□□□□□ -1.99
SNC1YAL030W URA1P28272 314 aaPredicted RBP2.63□□□□□ -1.99
SNC1YAL030W PRP19P32523 503 aaKnown RBP2.63□□□□□ -1.99
SNC1YAL030W YAP1801P38856 637 aa2.63□□□□□ -1.99
SNC1YAL030W PMC1P38929 1173 aaPredicted RBP2.63□□□□□ -1.99
SNC1YAL030W NAB3P38996 802 aaKnown RBP RIP-Chip data2.63□□□□□ -1.99not detected
SNC1YAL030W OAF1P39720 1047 aaPredicted RBP2.63□□□□□ -1.99
SNC1YAL030W PEA2P40091 420 aa2.63□□□□□ -1.99
SNC1YAL030W MMM1P41800 426 aa2.63□□□□□ -1.99
SNC1YAL030W RET2P43621 546 aa2.63□□□□□ -1.99
SNC1YAL030W CIT3P43635 486 aa2.63□□□□□ -1.99
SNC1YAL030W MNN11P46985 422 aaKnown RBP2.63□□□□□ -1.99
SNC1YAL030W NIT2P47016 307 aa2.63□□□□□ -1.99
SNC1YAL030W HXT16P47185 567 aa2.63□□□□□ -1.99
SNC1YAL030W ENV11P53246 860 aa2.63□□□□□ -1.99
SNC1YAL030W EAR1Q03212 550 aa2.63□□□□□ -1.99
SNC1YAL030W RCL1Q08096 367 aaPredicted RBP2.63□□□□□ -1.99
SNC1YAL030W YOR378WQ08902 515 aa2.63□□□□□ -1.99
SNC1YAL030W PHM7Q12252 991 aa2.63□□□□□ -1.99
SNC1YAL030W PER1P25625 357 aa2.62□□□□□ -1.99
SNC1YAL030W PLC1P32383 869 aa2.62□□□□□ -1.99
SNC1YAL030W ECM21P38167 1117 aaKnown RBP2.62□□□□□ -1.99
SNC1YAL030W HSL7P38274 827 aa2.62□□□□□ -1.99
SNC1YAL030W RPN10P38886 268 aaKnown RBP2.62□□□□□ -1.99
SNC1YAL030W CCT5P40413 562 aaKnown RBP2.62□□□□□ -1.99
SNC1YAL030W RLP7P40693 322 aaKnown RBP2.62□□□□□ -1.99
SNC1YAL030W SBE2P42223 864 aaKnown RBP2.62□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 48.3 ms