RNA–Protein interactions for RNA: ENST00000548916.1

NCKAP1L-205, Transcript of NCK associated protein 1 like, humanhuman

TSL 3

Gene NCKAP1L, Length 708 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1L-205ENST00000548916 LINC00114Q6XXX2 140 aa9.36□□□□□ -0.91
NCKAP1L-205ENST00000548916 SEPT12Q8IYM1 358 aa9.36□□□□□ -0.91
NCKAP1L-205ENST00000548916 ZNF608Q9ULD9 1512 aaPredicted RBP9.36□□□□□ -0.91
NCKAP1L-205ENST00000548916 CFTRP13569 1480 aa9.35□□□□□ -0.91
NCKAP1L-205ENST00000548916 RIMBP3CA6NJZ7 1639 aa9.35□□□□□ -0.91
NCKAP1L-205ENST00000548916 RIMBP3BA6NNM3 1639 aa9.35□□□□□ -0.91
NCKAP1L-205ENST00000548916 RIMBP3Q9UFD9 1639 aa9.35□□□□□ -0.91
NCKAP1L-205ENST00000548916 DKK1O94907 266 aa9.35□□□□□ -0.91
NCKAP1L-205ENST00000548916 SSFA2P28290 1259 aa9.35□□□□□ -0.91
NCKAP1L-205ENST00000548916 DPYDQ12882 1025 aa9.35□□□□□ -0.91
NCKAP1L-205ENST00000548916 SIX5Q8N196 739 aa9.35□□□□□ -0.91
NCKAP1L-205ENST00000548916 GOLGA6L1Q8N7Z2 621 aa9.35□□□□□ -0.91
NCKAP1L-205ENST00000548916 ZNF784Q8NCA9 323 aaPredicted RBP9.35□□□□□ -0.91
NCKAP1L-205ENST00000548916 SLAIN2Q9P270 581 aa9.35□□□□□ -0.91
NCKAP1L-205ENST00000548916 GATA4P43694 442 aa9.34□□□□□ -0.91
NCKAP1L-205ENST00000548916 SWI5Q1ZZU3 235 aa9.34□□□□□ -0.91
NCKAP1L-205ENST00000548916 TXNDC2Q86VQ3 553 aa9.34□□□□□ -0.91
NCKAP1L-205ENST00000548916 NUCKS1Q9H1E3 243 aaKnown RBP9.34□□□□□ -0.91
NCKAP1L-205ENST00000548916 RSF1Q96T23 1441 aaPredicted RBP9.33□□□□□ -0.92
NCKAP1L-205ENST00000548916 RANGAP1P46060 587 aaPredicted RBP9.33□□□□□ -0.92
NCKAP1L-205ENST00000548916 GTF2IP78347 998 aa9.33□□□□□ -0.92
NCKAP1L-205ENST00000548916 FOXD4L6Q3SYB3 417 aaPredicted RBP9.33□□□□□ -0.92
NCKAP1L-205ENST00000548916 OXLD1Q5BKU9 147 aa9.33□□□□□ -0.92
NCKAP1L-205ENST00000548916 FOXD4L3Q6VB84 417 aaPredicted RBP9.33□□□□□ -0.92
NCKAP1L-205ENST00000548916 C1orf229Q6ZS94 237 aaPredicted RBP9.33□□□□□ -0.92
NCKAP1L-205ENST00000548916 SND1Q7KZF4 910 aaKnown RBP eCLIP9.33□□□□□ -0.92
NCKAP1L-205ENST00000548916 KLRG1Q96E93 195 aa9.33□□□□□ -0.92
NCKAP1L-205ENST00000548916 SIRT1Q96EB6 747 aa9.33□□□□□ -0.92
NCKAP1L-205ENST00000548916 ZNF594Q96JF6 807 aaPredicted RBP9.33□□□□□ -0.92
NCKAP1L-205ENST00000548916 TMPRSS4Q9NRS4 437 aa9.33□□□□□ -0.92
NCKAP1L-205ENST00000548916 USP4Q13107 963 aa9.32□□□□□ -0.92
NCKAP1L-205ENST00000548916 PPARGC1BQ86YN6 1023 aaKnown RBP9.32□□□□□ -0.92
NCKAP1L-205ENST00000548916 CCER1Q8TC90 406 aaPredicted RBP9.32□□□□□ -0.92
NCKAP1L-205ENST00000548916 CFHR5Q9BXR6 569 aa9.32□□□□□ -0.92
NCKAP1L-205ENST00000548916 PHF24Q9UPV7 400 aa9.32□□□□□ -0.92
NCKAP1L-205ENST00000548916 PCDHGA11Q9Y5H2 935 aa9.32□□□□□ -0.92
NCKAP1L-205ENST00000548916 ARID4AP29374 1257 aaPredicted RBP9.31□□□□□ -0.92
NCKAP1L-205ENST00000548916 KIAA1024Q9UPX6 916 aa9.31□□□□□ -0.92
NCKAP1L-205ENST00000548916 MTMR7Q9Y216 660 aa9.31□□□□□ -0.92
NCKAP1L-205ENST00000548916 GPC1P35052 558 aa9.3□□□□□ -0.92
NCKAP1L-205ENST00000548916 KDF1Q8NAX2 398 aaPredicted RBP9.3□□□□□ -0.92
NCKAP1L-205ENST00000548916 TRIM52Q96A61 297 aa9.3□□□□□ -0.92
NCKAP1L-205ENST00000548916 PCDHB11Q9Y5F2 797 aa9.3□□□□□ -0.92
NCKAP1L-205ENST00000548916 ADD1P35611 737 aaKnown RBP9.29□□□□□ -0.92
NCKAP1L-205ENST00000548916 SEC13P55735 322 aa9.29□□□□□ -0.92
NCKAP1L-205ENST00000548916 RSPO4Q2I0M5 234 aaPredicted RBP9.29□□□□□ -0.92
NCKAP1L-205ENST00000548916 CCDC102BQ68D86 513 aa9.29□□□□□ -0.92
NCKAP1L-205ENST00000548916 C1orf216Q8TAB5 229 aa9.29□□□□□ -0.92
NCKAP1L-205ENST00000548916 ARHGEF11O15085 1522 aa9.29□□□□□ -0.92
NCKAP1L-205ENST00000548916 TOP2AP11388 1531 aaKnown RBP9.28□□□□□ -0.92
NCKAP1L-205ENST00000548916 LILRA1O75019 489 aa9.28□□□□□ -0.92
NCKAP1L-205ENST00000548916 COBLO75128 1261 aa9.28□□□□□ -0.92
NCKAP1L-205ENST00000548916 HOXB4P17483 251 aaPredicted RBP9.28□□□□□ -0.92
NCKAP1L-205ENST00000548916 ATP2B4P23634 1241 aa9.28□□□□□ -0.92
NCKAP1L-205ENST00000548916 RAB15P59190 212 aa9.28□□□□□ -0.92
NCKAP1L-205ENST00000548916 KRTAP4-7Q9BYR0 210 aa9.28□□□□□ -0.92
NCKAP1L-205ENST00000548916 CCDC27Q2M243 656 aa9.27□□□□□ -0.93
NCKAP1L-205ENST00000548916 CYB5RLQ6IPT4 315 aa9.27□□□□□ -0.93
NCKAP1L-205ENST00000548916 SLCO4C1Q6ZQN7 724 aa9.27□□□□□ -0.93
NCKAP1L-205ENST00000548916 RBM19Q9Y4C8 960 aaKnown RBP9.27□□□□□ -0.93
NCKAP1L-205ENST00000548916 TPCN2Q8NHX9 752 aa9.26□□□□□ -0.93
NCKAP1L-205ENST00000548916 POU4F2Q12837 409 aa9.25□□□□□ -0.93
NCKAP1L-205ENST00000548916 OCLNQ16625 522 aa9.25□□□□□ -0.93
NCKAP1L-205ENST00000548916 CLSPNQ9HAW4 1339 aa9.25□□□□□ -0.93
NCKAP1L-205ENST00000548916 CCDC88BA6NC98 1476 aa9.24□□□□□ -0.93
NCKAP1L-205ENST00000548916 SFI1A8K8P3 1242 aa9.24□□□□□ -0.93
NCKAP1L-205ENST00000548916 M0R2N6 131 aa9.24□□□□□ -0.93
NCKAP1L-205ENST00000548916 ERVH48-1M5A8F1 160 aa9.24□□□□□ -0.93
NCKAP1L-205ENST00000548916 MEN1O00255 615 aa9.24□□□□□ -0.93
NCKAP1L-205ENST00000548916 MYCP01106 439 aaPredicted RBP9.24□□□□□ -0.93
NCKAP1L-205ENST00000548916 F11P03951 625 aa9.24□□□□□ -0.93
NCKAP1L-205ENST00000548916 DGKGP49619 791 aa9.24□□□□□ -0.93
NCKAP1L-205ENST00000548916 PSME1Q06323 249 aa9.24□□□□□ -0.93
NCKAP1L-205ENST00000548916 SLC27A3Q5K4L6 730 aa9.24□□□□□ -0.93
NCKAP1L-205ENST00000548916 AQRO60306 1485 aaKnown RBP eCLIP9.23□□□□□ -0.93
NCKAP1L-205ENST00000548916 TOPBP1Q92547 1522 aa9.23□□□□□ -0.93
NCKAP1L-205ENST00000548916 NKAPLQ5M9Q1 402 aa9.23□□□□□ -0.93
NCKAP1L-205ENST00000548916 TAS1R3Q7RTX0 852 aa9.23□□□□□ -0.93
NCKAP1L-205ENST00000548916 CXXC1Q9P0U4 656 aaPredicted RBP9.23□□□□□ -0.93
NCKAP1L-205ENST00000548916 EIF4G3O43432 1585 aaKnown RBP9.22□□□□□ -0.93
NCKAP1L-205ENST00000548916 DYRK3O43781 588 aa9.22□□□□□ -0.93
NCKAP1L-205ENST00000548916 PRMT3O60678 531 aa9.22□□□□□ -0.93
NCKAP1L-205ENST00000548916 SCTRP47872 440 aa9.22□□□□□ -0.93
NCKAP1L-205ENST00000548916 ERVK-9P63128 1117 aa9.22□□□□□ -0.93
NCKAP1L-205ENST00000548916 LRP8Q14114 963 aa9.22□□□□□ -0.93
NCKAP1L-205ENST00000548916 LCE1DQ5T752 114 aa9.22□□□□□ -0.93
NCKAP1L-205ENST00000548916 NBPF10Q6P3W6 841 aaKnown RBP9.22□□□□□ -0.93
NCKAP1L-205ENST00000548916 NBPF15Q8N660 670 aa9.22□□□□□ -0.93
NCKAP1L-205ENST00000548916 BTBD6Q96KE9 485 aa9.22□□□□□ -0.93
NCKAP1L-205ENST00000548916 TIMMDC1Q9NPL8 285 aa9.22□□□□□ -0.93
NCKAP1L-205ENST00000548916 ARAP1Q96P48 1450 aa9.21□□□□□ -0.93
NCKAP1L-205ENST00000548916 IFT140Q96RY7 1462 aa9.21□□□□□ -0.93
NCKAP1L-205ENST00000548916 BMP4P12644 408 aa9.21□□□□□ -0.94
NCKAP1L-205ENST00000548916 WDR44Q5JSH3 913 aa9.21□□□□□ -0.94
NCKAP1L-205ENST00000548916 FOXD4L4Q8WXT5 416 aaPredicted RBP9.21□□□□□ -0.94
NCKAP1L-205ENST00000548916 GGA1Q9UJY5 639 aa9.21□□□□□ -0.94
NCKAP1L-205ENST00000548916 CHD1O14646 1710 aa9.21□□□□□ -0.94
NCKAP1L-205ENST00000548916 SOWAHDA6NJG2 315 aa9.2□□□□□ -0.94
NCKAP1L-205ENST00000548916 CC2D2BQ6DHV5 1058 aa9.2□□□□□ -0.94
NCKAP1L-205ENST00000548916 PRIMPOLQ96LW4 560 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms