RNA–Protein interactions for RNA: ENST00000548916.1

NCKAP1L-205, Transcript of NCK associated protein 1 like, humanhuman

TSL 3

Gene NCKAP1L, Length 708 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1L-205ENST00000548916 AEBP2Q6ZN18 517 aaPredicted RBP31.54■■■□□ 2.64
NCKAP1L-205ENST00000548916 CHIC1Q5VXU3 224 aa29.65■■■□□ 2.34
NCKAP1L-205ENST00000548916 SENP3Q9H4L4 574 aaPredicted RBP27.21■■□□□ 1.95
NCKAP1L-205ENST00000548916 PHF23Q9BUL5 403 aaPredicted RBP26.66■■□□□ 1.86
NCKAP1L-205ENST00000548916 FOXD1Q16676 465 aa25.35■■□□□ 1.65
NCKAP1L-205ENST00000548916 POTEDQ86YR6 584 aa24.99■■□□□ 1.59
NCKAP1L-205ENST00000548916 MSH5O43196 834 aa24.2■■□□□ 1.46
NCKAP1L-205ENST00000548916 PIAS4Q8N2W9 510 aaPredicted RBP23.57■■□□□ 1.36
NCKAP1L-205ENST00000548916 PLPPR3Q6T4P5 718 aa23■■□□□ 1.27
NCKAP1L-205ENST00000548916 PPP6R1Q9UPN7 881 aa22.98■■□□□ 1.27
NCKAP1L-205ENST00000548916 ADRA2BP18089 450 aa22.9■■□□□ 1.26
NCKAP1L-205ENST00000548916 DMRT2Q9Y5R5 561 aa21.38■■□□□ 1.01
NCKAP1L-205ENST00000548916 CACNB1Q02641 598 aaPredicted RBP21.28■■□□□ 1
NCKAP1L-205ENST00000548916 MAPK8IP2Q13387 824 aaPredicted RBP21.26■□□□□ 0.99
NCKAP1L-205ENST00000548916 SCAF1Q9H7N4 1312 aaKnown RBP21.12■□□□□ 0.97
NCKAP1L-205ENST00000548916 DCAF8L1A6NGE4 600 aa20.64■□□□□ 0.89
NCKAP1L-205ENST00000548916 RNF39Q9H2S5 420 aa20.48■□□□□ 0.87
NCKAP1L-205ENST00000548916 HOXD11P31277 338 aaPredicted RBP20.24■□□□□ 0.83
NCKAP1L-205ENST00000548916 C1QBPQ07021 282 aaKnown RBP20.2■□□□□ 0.82
NCKAP1L-205ENST00000548916 PPP4R3CPQ6ZMV5 832 aa19.99■□□□□ 0.79
NCKAP1L-205ENST00000548916 RNF216Q9NWF9 866 aaPredicted RBP19.9■□□□□ 0.78
NCKAP1L-205ENST00000548916 CNKSR2Q8WXI2 1034 aa19.86■□□□□ 0.77
NCKAP1L-205ENST00000548916 DNAJC5BQ9UF47 199 aa19.77■□□□□ 0.76
NCKAP1L-205ENST00000548916 POTEHQ6S545 545 aa19.46■□□□□ 0.71
NCKAP1L-205ENST00000548916 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.37■□□□□ 0.69
NCKAP1L-205ENST00000548916 NCBP3Q53F19 620 aaKnown RBP19.07■□□□□ 0.64
NCKAP1L-205ENST00000548916 DSG3P32926 999 aa18.88■□□□□ 0.61
NCKAP1L-205ENST00000548916 CAPN15O75808 1086 aa18.86■□□□□ 0.61
NCKAP1L-205ENST00000548916 U3KPZ7 1027 aaPredicted RBP18.77■□□□□ 0.6
NCKAP1L-205ENST00000548916 SPINK5Q9NQ38 1064 aaPredicted RBP18.75■□□□□ 0.59
NCKAP1L-205ENST00000548916 NPM3O75607 178 aaKnown RBP18.66■□□□□ 0.58
NCKAP1L-205ENST00000548916 APLP2Q06481 763 aa18.36■□□□□ 0.53
NCKAP1L-205ENST00000548916 TRHP20396 242 aaPredicted RBP18.33■□□□□ 0.52
NCKAP1L-205ENST00000548916 ZNF219Q9P2Y4 722 aaPredicted RBP18.32■□□□□ 0.52
NCKAP1L-205ENST00000548916 ABCB7O75027 752 aa18.29■□□□□ 0.52
NCKAP1L-205ENST00000548916 RBM42Q9BTD8 480 aaKnown RBP18.17■□□□□ 0.5
NCKAP1L-205ENST00000548916 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.1■□□□□ 0.49
NCKAP1L-205ENST00000548916 HNRNPUL2Q1KMD3 747 aaKnown RBP18.1■□□□□ 0.49
NCKAP1L-205ENST00000548916 CHRDL2Q6WN34 429 aa18.04■□□□□ 0.48
NCKAP1L-205ENST00000548916 SLC4A2P04920 1241 aa18■□□□□ 0.47
NCKAP1L-205ENST00000548916 SAMD1Q6SPF0 538 aaPredicted RBP17.91■□□□□ 0.46
NCKAP1L-205ENST00000548916 SP7Q8TDD2 431 aaPredicted RBP17.84■□□□□ 0.45
NCKAP1L-205ENST00000548916 POLA2Q14181 598 aa17.61■□□□□ 0.41
NCKAP1L-205ENST00000548916 KCNA4P22459 653 aa17.51■□□□□ 0.39
NCKAP1L-205ENST00000548916 AKT1S1Q96B36 256 aa17.5■□□□□ 0.39
NCKAP1L-205ENST00000548916 PIP4P2Q8N4L2 257 aa17.38■□□□□ 0.37
NCKAP1L-205ENST00000548916 HAX1O00165 279 aa17.37■□□□□ 0.37
NCKAP1L-205ENST00000548916 MYCNP04198 464 aaPredicted RBP17.36■□□□□ 0.37
NCKAP1L-205ENST00000548916 ZBTB12Q9Y330 459 aaPredicted RBP17.3■□□□□ 0.36
NCKAP1L-205ENST00000548916 REM2Q8IYK8 340 aaPredicted RBP17.29■□□□□ 0.36
NCKAP1L-205ENST00000548916 FXR2P51116 673 aaKnown RBP eCLIP17.14■□□□□ 0.33
NCKAP1L-205ENST00000548916 PITPNM1O00562 1244 aa17.12■□□□□ 0.33
NCKAP1L-205ENST00000548916 OSCARQ8IYS5 282 aa17.09■□□□□ 0.33
NCKAP1L-205ENST00000548916 EVX2Q03828 476 aa16.93■□□□□ 0.3
NCKAP1L-205ENST00000548916 ATF5Q9Y2D1 282 aaPredicted RBP16.89■□□□□ 0.29
NCKAP1L-205ENST00000548916 LHX8Q68G74 356 aa16.72■□□□□ 0.27
NCKAP1L-205ENST00000548916 PRKAR2AP13861 404 aaKnown RBP16.7■□□□□ 0.26
NCKAP1L-205ENST00000548916 FOXD4L1Q9NU39 408 aa16.7■□□□□ 0.26
NCKAP1L-205ENST00000548916 SPDYE2BA6NHP3 402 aa16.64■□□□□ 0.25
NCKAP1L-205ENST00000548916 SPDYE6P0CI01 402 aa16.64■□□□□ 0.25
NCKAP1L-205ENST00000548916 SPDYE2Q495Y8 402 aa16.64■□□□□ 0.25
NCKAP1L-205ENST00000548916 C19orf67A6NJJ6 358 aa16.62■□□□□ 0.25
NCKAP1L-205ENST00000548916 GABBR2O75899 941 aa16.6■□□□□ 0.25
NCKAP1L-205ENST00000548916 SPDYE1Q8NFV5 336 aaPredicted RBP16.58■□□□□ 0.24
NCKAP1L-205ENST00000548916 CLEC11AQ9Y240 323 aa16.58■□□□□ 0.24
NCKAP1L-205ENST00000548916 FBLN2P98095 1184 aa16.48■□□□□ 0.23
NCKAP1L-205ENST00000548916 SLC4A1APQ9BWU0 796 aaKnown RBP16.43■□□□□ 0.22
NCKAP1L-205ENST00000548916 PLSCR2Q9NRY7 297 aa16.43■□□□□ 0.22
NCKAP1L-205ENST00000548916 CHADLQ6NUI6 762 aa16.29■□□□□ 0.2
NCKAP1L-205ENST00000548916 ZNF692Q9BU19 519 aaPredicted RBP16.29■□□□□ 0.2
NCKAP1L-205ENST00000548916 ATXN8OSP0DMR3 200 aa16.27■□□□□ 0.2
NCKAP1L-205ENST00000548916 SSUH2Q9Y2M2 353 aa16.25■□□□□ 0.19
NCKAP1L-205ENST00000548916 PRR29P0C7W0 189 aa16.19■□□□□ 0.18
NCKAP1L-205ENST00000548916 POTEIP0CG38 1075 aa16.16■□□□□ 0.18
NCKAP1L-205ENST00000548916 CLCN6P51797 869 aa16.16■□□□□ 0.18
NCKAP1L-205ENST00000548916 CD44P16070 742 aaKnown RBP16.14■□□□□ 0.17
NCKAP1L-205ENST00000548916 EHMT2Q96KQ7 1210 aa16.12■□□□□ 0.17
NCKAP1L-205ENST00000548916 MKRN4PQ13434 485 aaPredicted RBP16.08■□□□□ 0.16
NCKAP1L-205ENST00000548916 DCBLD2Q96PD2 775 aa16.06■□□□□ 0.16
NCKAP1L-205ENST00000548916 ZBTB22O15209 634 aa16.02■□□□□ 0.16
NCKAP1L-205ENST00000548916 PABPN1Q86U42 306 aaKnown RBP eCLIP15.99■□□□□ 0.15
NCKAP1L-205ENST00000548916 FARP1Q9Y4F1 1045 aaPredicted RBP15.98■□□□□ 0.15
NCKAP1L-205ENST00000548916 ZNF579Q8NAF0 562 aaKnown RBP15.83■□□□□ 0.12
NCKAP1L-205ENST00000548916 POTEMA6NI47 508 aa15.8■□□□□ 0.12
NCKAP1L-205ENST00000548916 OTUD5Q96G74 571 aa15.78■□□□□ 0.12
NCKAP1L-205ENST00000548916 ZRANB1Q9UGI0 708 aa15.77■□□□□ 0.12
NCKAP1L-205ENST00000548916 CSRNP3Q8WYN3 585 aa15.74■□□□□ 0.11
NCKAP1L-205ENST00000548916 POTEGQ6S5H5 508 aa15.72■□□□□ 0.11
NCKAP1L-205ENST00000548916 GALR2O43603 387 aaPredicted RBP15.65■□□□□ 0.1
NCKAP1L-205ENST00000548916 PCDH10Q9P2E7 1040 aa15.65■□□□□ 0.1
NCKAP1L-205ENST00000548916 POTEB2H3BUK9 544 aa15.61■□□□□ 0.09
NCKAP1L-205ENST00000548916 PAK3O75914 559 aaPredicted RBP15.55■□□□□ 0.08
NCKAP1L-205ENST00000548916 CREBZFQ9NS37 354 aa15.49■□□□□ 0.07
NCKAP1L-205ENST00000548916 STAG3Q9UJ98 1225 aa15.45■□□□□ 0.06
NCKAP1L-205ENST00000548916 PHF12Q96QT6 1004 aa15.42■□□□□ 0.06
NCKAP1L-205ENST00000548916 MAMSTRQ6ZN01 415 aa15.4■□□□□ 0.06
NCKAP1L-205ENST00000548916 PELP1Q8IZL8 1130 aaKnown RBP15.38■□□□□ 0.05
NCKAP1L-205ENST00000548916 METRNQ9UJH8 293 aa15.38■□□□□ 0.05
NCKAP1L-205ENST00000548916 SLC39A7Q92504 469 aa15.34■□□□□ 0.05
NCKAP1L-205ENST00000548916 C7P10643 843 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 206.9 ms