RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 MPSTP25325 297 aa5.84□□□□□ -1.47
HMGN1P28-201ENST00000521340 CLN3Q13286 438 aa5.84□□□□□ -1.47
HMGN1P28-201ENST00000521340 RNF217Q8TC41 542 aa5.84□□□□□ -1.47
HMGN1P28-201ENST00000521340 CNKSR1Q969H4 720 aa5.84□□□□□ -1.47
HMGN1P28-201ENST00000521340 COL25A1Q9BXS0 654 aaPredicted RBP5.84□□□□□ -1.47
HMGN1P28-201ENST00000521340 ARHGEF10LQ9HCE6 1279 aa5.84□□□□□ -1.47
HMGN1P28-201ENST00000521340 RAB6BQ9NRW1 208 aa5.84□□□□□ -1.47
HMGN1P28-201ENST00000521340 SENP3-EIF4A1A0A087X0R7 540 aa5.83□□□□□ -1.48
HMGN1P28-201ENST00000521340 PPP1R12BO60237 982 aaPredicted RBP5.83□□□□□ -1.48
HMGN1P28-201ENST00000521340 IGSF3O75054 1194 aa5.83□□□□□ -1.48
HMGN1P28-201ENST00000521340 PTGIRP43119 386 aa5.83□□□□□ -1.48
HMGN1P28-201ENST00000521340 TEAD4Q15561 434 aa5.83□□□□□ -1.48
HMGN1P28-201ENST00000521340 C16orf46Q6P387 395 aa5.83□□□□□ -1.48
HMGN1P28-201ENST00000521340 TMC7Q7Z402 723 aa5.83□□□□□ -1.48
HMGN1P28-201ENST00000521340 VWA5B2Q8N398 1253 aa5.83□□□□□ -1.48
HMGN1P28-201ENST00000521340 GIPC2Q8TF65 315 aa5.83□□□□□ -1.48
HMGN1P28-201ENST00000521340 MRRFQ96E11 262 aaKnown RBP5.83□□□□□ -1.48
HMGN1P28-201ENST00000521340 BCL2L13Q9BXK5 485 aa5.83□□□□□ -1.48
HMGN1P28-201ENST00000521340 POLMQ9NP87 494 aaPredicted RBP5.83□□□□□ -1.48
HMGN1P28-201ENST00000521340 CCDC87Q9NVE4 849 aa5.83□□□□□ -1.48
HMGN1P28-201ENST00000521340 TREHO43280 583 aa5.82□□□□□ -1.48
HMGN1P28-201ENST00000521340 FAM13AO94988 1023 aa5.82□□□□□ -1.48
HMGN1P28-201ENST00000521340 ITGA6P23229 1130 aa5.82□□□□□ -1.48
HMGN1P28-201ENST00000521340 EIF1AXP47813 144 aaKnown RBP5.82□□□□□ -1.48
HMGN1P28-201ENST00000521340 PSMA6P60900 246 aaKnown RBP5.82□□□□□ -1.48
HMGN1P28-201ENST00000521340 CENPCQ03188 943 aa5.82□□□□□ -1.48
HMGN1P28-201ENST00000521340 ESCO1Q5FWF5 840 aa5.82□□□□□ -1.48
HMGN1P28-201ENST00000521340 KLRG1Q96E93 195 aa5.82□□□□□ -1.48
HMGN1P28-201ENST00000521340 FAM129BQ96TA1 746 aa5.82□□□□□ -1.48
HMGN1P28-201ENST00000521340 MAPK1P28482 360 aa5.81□□□□□ -1.48
HMGN1P28-201ENST00000521340 FMR1Q06787 632 aaKnown RBP eCLIP5.81□□□□□ -1.48
HMGN1P28-201ENST00000521340 KCNMA1Q12791 1236 aa5.81□□□□□ -1.48
HMGN1P28-201ENST00000521340 PPARGC1BQ86YN6 1023 aaKnown RBP5.81□□□□□ -1.48
HMGN1P28-201ENST00000521340 WHAMMQ8TF30 809 aa5.81□□□□□ -1.48
HMGN1P28-201ENST00000521340 STIM2Q9P246 746 aa5.81□□□□□ -1.48
HMGN1P28-201ENST00000521340 P4HBP07237 508 aaKnown RBP5.8□□□□□ -1.48
HMGN1P28-201ENST00000521340 NOS2P35228 1153 aa5.8□□□□□ -1.48
HMGN1P28-201ENST00000521340 MRPL58Q14197 206 aaKnown RBP5.8□□□□□ -1.48
HMGN1P28-201ENST00000521340 ZNF385CQ66K41 422 aaPredicted RBP5.8□□□□□ -1.48
HMGN1P28-201ENST00000521340 SV2AQ7L0J3 742 aa5.8□□□□□ -1.48
HMGN1P28-201ENST00000521340 ETFBKMTQ8IXQ9 262 aa5.8□□□□□ -1.48
HMGN1P28-201ENST00000521340 CHMP7Q8WUX9 453 aaPredicted RBP5.8□□□□□ -1.48
HMGN1P28-201ENST00000521340 CITED4Q96RK1 184 aa5.8□□□□□ -1.48
HMGN1P28-201ENST00000521340 GRIP2Q9C0E4 1043 aa5.8□□□□□ -1.48
HMGN1P28-201ENST00000521340 CUEDC1Q9NWM3 386 aaPredicted RBP5.8□□□□□ -1.48
HMGN1P28-201ENST00000521340 ADAMTS8Q9UP79 889 aa5.8□□□□□ -1.48
HMGN1P28-201ENST00000521340 BCS1LQ9Y276 419 aa5.8□□□□□ -1.48
HMGN1P28-201ENST00000521340 LOC105371045A0A1W2PR82 267 aa5.79□□□□□ -1.48
HMGN1P28-201ENST00000521340 CDC14CA4D256 554 aa5.79□□□□□ -1.48
HMGN1P28-201ENST00000521340 GPR182O15218 404 aa5.79□□□□□ -1.48
HMGN1P28-201ENST00000521340 SLURP2P0DP57 97 aa5.79□□□□□ -1.48
HMGN1P28-201ENST00000521340 RNF19AQ9NV58 838 aa5.79□□□□□ -1.48
HMGN1P28-201ENST00000521340 ARHGEF15O94989 841 aa5.78□□□□□ -1.48
HMGN1P28-201ENST00000521340 RECKO95980 971 aa5.78□□□□□ -1.48
HMGN1P28-201ENST00000521340 RNF144AP50876 292 aaPredicted RBP5.78□□□□□ -1.48
HMGN1P28-201ENST00000521340 TLR1Q15399 786 aa5.78□□□□□ -1.48
HMGN1P28-201ENST00000521340 ZSCAN29Q8IWY8 852 aaPredicted RBP5.78□□□□□ -1.48
HMGN1P28-201ENST00000521340 ALDH16A1Q8IZ83 802 aa5.78□□□□□ -1.48
HMGN1P28-201ENST00000521340 GJD3Q8N144 294 aa5.78□□□□□ -1.48
HMGN1P28-201ENST00000521340 L3MBTL2Q969R5 705 aa5.78□□□□□ -1.48
HMGN1P28-201ENST00000521340 TRIM52Q96A61 297 aa5.78□□□□□ -1.48
HMGN1P28-201ENST00000521340 DMGDHQ9UI17 866 aaKnown RBP5.78□□□□□ -1.48
HMGN1P28-201ENST00000521340 SERTM1A2A2V5 107 aa5.77□□□□□ -1.49
HMGN1P28-201ENST00000521340 LYSMD3Q7Z3D4 306 aa5.77□□□□□ -1.49
HMGN1P28-201ENST00000521340 PRICKLE2Q7Z3G6 844 aa5.77□□□□□ -1.49
HMGN1P28-201ENST00000521340 ATCAYQ86WG3 371 aa5.77□□□□□ -1.49
HMGN1P28-201ENST00000521340 ALKBH8Q96BT7 664 aaKnown RBP5.77□□□□□ -1.49
HMGN1P28-201ENST00000521340 CFHR5Q9BXR6 569 aa5.77□□□□□ -1.49
HMGN1P28-201ENST00000521340 ESF1Q9H501 851 aaKnown RBP5.77□□□□□ -1.49
HMGN1P28-201ENST00000521340 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.77□□□□□ -1.49
HMGN1P28-201ENST00000521340 HCN4Q9Y3Q4 1203 aa5.77□□□□□ -1.49
HMGN1P28-201ENST00000521340 RHOQP17081 205 aa5.76□□□□□ -1.49
HMGN1P28-201ENST00000521340 TXLNAP40222 546 aa5.76□□□□□ -1.49
HMGN1P28-201ENST00000521340 RASSF7Q02833 373 aa5.76□□□□□ -1.49
HMGN1P28-201ENST00000521340 GAS6Q14393 721 aa5.76□□□□□ -1.49
HMGN1P28-201ENST00000521340 RTN1Q16799 776 aa5.76□□□□□ -1.49
HMGN1P28-201ENST00000521340 C11orf91Q3C1V1 193 aa5.76□□□□□ -1.49
HMGN1P28-201ENST00000521340 C1orf53Q5VUE5 145 aa5.76□□□□□ -1.49
HMGN1P28-201ENST00000521340 PARP3Q9Y6F1 533 aa5.76□□□□□ -1.49
HMGN1P28-201ENST00000521340 OPLAHO14841 1288 aa5.75□□□□□ -1.49
HMGN1P28-201ENST00000521340 BRD2P25440 801 aaKnown RBP5.75□□□□□ -1.49
HMGN1P28-201ENST00000521340 GPC1P35052 558 aa5.75□□□□□ -1.49
HMGN1P28-201ENST00000521340 EHHADHQ08426 723 aa5.75□□□□□ -1.49
HMGN1P28-201ENST00000521340 ZNF326Q5BKZ1 582 aaKnown RBP5.75□□□□□ -1.49
HMGN1P28-201ENST00000521340 ALKBH2Q6NS38 261 aa5.75□□□□□ -1.49
HMGN1P28-201ENST00000521340 SVOPQ8N4V2 548 aa5.75□□□□□ -1.49
HMGN1P28-201ENST00000521340 SETDB2Q96T68 719 aa5.75□□□□□ -1.49
HMGN1P28-201ENST00000521340 PHACTR1Q9C0D0 580 aa5.75□□□□□ -1.49
HMGN1P28-201ENST00000521340 KLK14Q9P0G3 267 aa5.75□□□□□ -1.49
HMGN1P28-201ENST00000521340 SPATA31C2B4DYI2 1134 aa5.74□□□□□ -1.49
HMGN1P28-201ENST00000521340 ADAMTS2O95450 1211 aa5.74□□□□□ -1.49
HMGN1P28-201ENST00000521340 TCF3P15923 654 aa5.74□□□□□ -1.49
HMGN1P28-201ENST00000521340 C4orf17Q53FE4 359 aa5.74□□□□□ -1.49
HMGN1P28-201ENST00000521340 EAPPQ56P03 285 aaPredicted RBP5.74□□□□□ -1.49
HMGN1P28-201ENST00000521340 LYPD4Q6UWN0 246 aa5.74□□□□□ -1.49
HMGN1P28-201ENST00000521340 TMEM151AQ8N4L1 468 aa5.74□□□□□ -1.49
HMGN1P28-201ENST00000521340 IFT43Q96FT9 208 aa5.74□□□□□ -1.49
HMGN1P28-201ENST00000521340 GGNBP2Q9H3C7 697 aa5.74□□□□□ -1.49
HMGN1P28-201ENST00000521340 BRPF3Q9ULD4 1205 aa5.74□□□□□ -1.49
HMGN1P28-201ENST00000521340 WWC3Q9ULE0 1092 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms