RNA–Protein interactions for RNA: ENST00000516842.1

RNU6-557P-201, Transcript of RNA, U6 small nuclear 557, pseudogene, humanhuman

BASIC

Gene RNU6-557P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-557P-201ENST00000516842 KSR1Q8IVT5 923 aa2.32□□□□□ -2.04
RNU6-557P-201ENST00000516842 TNFRSF25Q93038 417 aa2.32□□□□□ -2.04
RNU6-557P-201ENST00000516842 AIDAQ96BJ3 306 aa2.32□□□□□ -2.04
RNU6-557P-201ENST00000516842 TMPRSS5Q9H3S3 457 aa2.32□□□□□ -2.04
RNU6-557P-201ENST00000516842 STOML1Q9UBI4 398 aa2.32□□□□□ -2.04
RNU6-557P-201ENST00000516842 EFSO43281 561 aa2.31□□□□□ -2.04
RNU6-557P-201ENST00000516842 ZSCAN22P10073 491 aaPredicted RBP2.31□□□□□ -2.04
RNU6-557P-201ENST00000516842 CTDSPL2Q05D32 466 aa2.31□□□□□ -2.04
RNU6-557P-201ENST00000516842 NFIAQ12857 509 aa2.31□□□□□ -2.04
RNU6-557P-201ENST00000516842 NR6A1Q15406 480 aa2.31□□□□□ -2.04
RNU6-557P-201ENST00000516842 TBC1D9Q6ZT07 1266 aa2.31□□□□□ -2.04
RNU6-557P-201ENST00000516842 CYP2U1Q7Z449 544 aa2.31□□□□□ -2.04
RNU6-557P-201ENST00000516842 TP53INP2Q8IXH6 220 aa2.31□□□□□ -2.04
RNU6-557P-201ENST00000516842 LRRN4Q8WUT4 740 aa2.31□□□□□ -2.04
RNU6-557P-201ENST00000516842 BBXQ8WY36 941 aaPredicted RBP2.31□□□□□ -2.04
RNU6-557P-201ENST00000516842 BEGAINQ9BUH8 593 aa2.31□□□□□ -2.04
RNU6-557P-201ENST00000516842 HMX2A2RU54 273 aa2.3□□□□□ -2.04
RNU6-557P-201ENST00000516842 TRAK2O60296 914 aa2.3□□□□□ -2.04
RNU6-557P-201ENST00000516842 FAM157BP0CG42 384 aa2.3□□□□□ -2.04
RNU6-557P-201ENST00000516842 GJA5P36382 358 aa2.3□□□□□ -2.04
RNU6-557P-201ENST00000516842 CTSWP56202 376 aa2.3□□□□□ -2.04
RNU6-557P-201ENST00000516842 FBXO11Q86XK2 927 aa2.3□□□□□ -2.04
RNU6-557P-201ENST00000516842 TRIM42Q8IWZ5 723 aa2.3□□□□□ -2.04
RNU6-557P-201ENST00000516842 AGGF1Q8N302 714 aaeCLIP2.3□□□□□ -2.04
RNU6-557P-201ENST00000516842 C20orf173Q96LM9 149 aa2.3□□□□□ -2.04
RNU6-557P-201ENST00000516842 AKTIPQ9H8T0 292 aa2.3□□□□□ -2.04
RNU6-557P-201ENST00000516842 ANGEL1Q9UNK9 670 aaKnown RBP2.3□□□□□ -2.04
RNU6-557P-201ENST00000516842 MEGF11A6BM72 1044 aa2.29□□□□□ -2.04
RNU6-557P-201ENST00000516842 GSC2O15499 205 aa2.29□□□□□ -2.04
RNU6-557P-201ENST00000516842 DEAF1O75398 565 aaPredicted RBP2.29□□□□□ -2.04
RNU6-557P-201ENST00000516842 INHBBP09529 407 aa2.29□□□□□ -2.04
RNU6-557P-201ENST00000516842 TBC1D8BQ0IIM8 1120 aa2.29□□□□□ -2.04
RNU6-557P-201ENST00000516842 SFSWAPQ12872 951 aaKnown RBP2.29□□□□□ -2.04
RNU6-557P-201ENST00000516842 PPP2R2DQ66LE6 453 aa2.29□□□□□ -2.04
RNU6-557P-201ENST00000516842 IGF2-ASQ6U949 168 aa2.29□□□□□ -2.04
RNU6-557P-201ENST00000516842 DBX2Q6ZNG2 339 aa2.29□□□□□ -2.04
RNU6-557P-201ENST00000516842 LRRC56Q8IYG6 542 aaPredicted RBP2.29□□□□□ -2.04
RNU6-557P-201ENST00000516842 SEPT12Q8IYM1 358 aa2.29□□□□□ -2.04
RNU6-557P-201ENST00000516842 HELBQ8NG08 1087 aaPredicted RBP2.29□□□□□ -2.04
RNU6-557P-201ENST00000516842 SHKBP1Q8TBC3 707 aa2.29□□□□□ -2.04
RNU6-557P-201ENST00000516842 XAGE2Q96GT9 111 aa2.29□□□□□ -2.04
RNU6-557P-201ENST00000516842 CFAP44Q96MT7 982 aa2.29□□□□□ -2.04
RNU6-557P-201ENST00000516842 UBL7Q96S82 380 aaPredicted RBP2.29□□□□□ -2.04
RNU6-557P-201ENST00000516842 IGFLR1Q9H665 355 aa2.29□□□□□ -2.04
RNU6-557P-201ENST00000516842 C7orf69Q9H7B7 122 aa2.29□□□□□ -2.04
RNU6-557P-201ENST00000516842 CCDC39Q9UFE4 941 aa2.29□□□□□ -2.04
RNU6-557P-201ENST00000516842 LIMD1Q9UGP4 676 aa2.29□□□□□ -2.04
RNU6-557P-201ENST00000516842 OVOL3O00110 214 aa2.28□□□□□ -2.04
RNU6-557P-201ENST00000516842 GLB1P16278 677 aa2.28□□□□□ -2.04
RNU6-557P-201ENST00000516842 GTF2E1P29083 439 aaPredicted RBP2.28□□□□□ -2.04
RNU6-557P-201ENST00000516842 PPARGC1BQ86YN6 1023 aaKnown RBP2.28□□□□□ -2.04
RNU6-557P-201ENST00000516842 EPS8L1Q8TE68 723 aa2.28□□□□□ -2.04
RNU6-557P-201ENST00000516842 RHBDD1Q8TEB9 315 aa2.28□□□□□ -2.04
RNU6-557P-201ENST00000516842 NAGPAQ9UK23 515 aa2.28□□□□□ -2.04
RNU6-557P-201ENST00000516842 MINK1Q8N4C8 1332 aaPredicted RBP2.27□□□□□ -2.05
RNU6-557P-201ENST00000516842 F8W735 103 aaPredicted RBP2.27□□□□□ -2.05
RNU6-557P-201ENST00000516842 SUV39H1O43463 412 aa2.27□□□□□ -2.05
RNU6-557P-201ENST00000516842 LILRB3O75022 631 aa2.27□□□□□ -2.05
RNU6-557P-201ENST00000516842 GNRH1P01148 92 aa2.27□□□□□ -2.05
RNU6-557P-201ENST00000516842 PLAURQ03405 335 aa2.27□□□□□ -2.05
RNU6-557P-201ENST00000516842 MESP2Q0VG99 397 aa2.27□□□□□ -2.05
RNU6-557P-201ENST00000516842 SMYD5Q6GMV2 418 aa2.27□□□□□ -2.05
RNU6-557P-201ENST00000516842 PSAPL1Q6NUJ1 521 aa2.27□□□□□ -2.05
RNU6-557P-201ENST00000516842 ARMC10Q8N2F6 343 aa2.27□□□□□ -2.05
RNU6-557P-201ENST00000516842 SLC38A3Q99624 504 aa2.27□□□□□ -2.05
RNU6-557P-201ENST00000516842 GJA3Q9Y6H8 435 aa2.27□□□□□ -2.05
RNU6-557P-201ENST00000516842 WDR64B1ANS9 1081 aa2.26□□□□□ -2.05
RNU6-557P-201ENST00000516842 GRNP28799 593 aaKnown RBP2.26□□□□□ -2.05
RNU6-557P-201ENST00000516842 SPEM2Q0P670 501 aa2.26□□□□□ -2.05
RNU6-557P-201ENST00000516842 MSL1Q68DK7 614 aa2.26□□□□□ -2.05
RNU6-557P-201ENST00000516842 RNF43Q68DV7 783 aa2.26□□□□□ -2.05
RNU6-557P-201ENST00000516842 COL26A1Q96A83 441 aa2.26□□□□□ -2.05
RNU6-557P-201ENST00000516842 MYRFLQ96LU7 910 aa2.26□□□□□ -2.05
RNU6-557P-201ENST00000516842 TOX2Q96NM4 488 aa2.26□□□□□ -2.05
RNU6-557P-201ENST00000516842 DBNDD2Q9BQY9 259 aa2.26□□□□□ -2.05
RNU6-557P-201ENST00000516842 FAM53CQ9NYF3 392 aa2.26□□□□□ -2.05
RNU6-557P-201ENST00000516842 SLC6A14Q9UN76 642 aa2.26□□□□□ -2.05
RNU6-557P-201ENST00000516842 GPSM3Q9Y4H4 160 aa2.26□□□□□ -2.05
RNU6-557P-201ENST00000516842 PCDHB11Q9Y5F2 797 aa2.26□□□□□ -2.05
RNU6-557P-201ENST00000516842 DLL1O00548 723 aa2.25□□□□□ -2.05
RNU6-557P-201ENST00000516842 DHX15O43143 795 aaKnown RBP2.25□□□□□ -2.05
RNU6-557P-201ENST00000516842 HOXA5P20719 270 aa2.25□□□□□ -2.05
RNU6-557P-201ENST00000516842 RAP1GAPP47736 663 aa2.25□□□□□ -2.05
RNU6-557P-201ENST00000516842 TLR1Q15399 786 aa2.25□□□□□ -2.05
RNU6-557P-201ENST00000516842 MSMPQ1L6U9 139 aa2.25□□□□□ -2.05
RNU6-557P-201ENST00000516842 ZSCAN18Q8TBC5 510 aaPredicted RBP2.25□□□□□ -2.05
RNU6-557P-201ENST00000516842 RELTQ969Z4 430 aa2.25□□□□□ -2.05
RNU6-557P-201ENST00000516842 RAPGEFL1Q9UHV5 662 aa2.25□□□□□ -2.05
RNU6-557P-201ENST00000516842 ZC3H4Q9UPT8 1303 aaKnown RBP2.24□□□□□ -2.05
RNU6-557P-201ENST00000516842 RGS9O75916 674 aaPredicted RBP2.24□□□□□ -2.05
RNU6-557P-201ENST00000516842 TTLL12Q14166 644 aaPredicted RBP2.24□□□□□ -2.05
RNU6-557P-201ENST00000516842 GRIK5Q16478 980 aa2.24□□□□□ -2.05
RNU6-557P-201ENST00000516842 LRRC69Q6ZNQ3 347 aa2.24□□□□□ -2.05
RNU6-557P-201ENST00000516842 Q6ZS46 218 aa2.24□□□□□ -2.05
RNU6-557P-201ENST00000516842 SIAH1Q8IUQ4 282 aa2.24□□□□□ -2.05
RNU6-557P-201ENST00000516842 C1orf216Q8TAB5 229 aa2.24□□□□□ -2.05
RNU6-557P-201ENST00000516842 FAM168AQ92567 244 aa2.24□□□□□ -2.05
RNU6-557P-201ENST00000516842 UBE2OQ9C0C9 1292 aaKnown RBP2.24□□□□□ -2.05
RNU6-557P-201ENST00000516842 ESF1Q9H501 851 aaKnown RBP2.24□□□□□ -2.05
RNU6-557P-201ENST00000516842 WDR26Q9H7D7 661 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms