RNA–Protein interactions for RNA: ENST00000516842.1

RNU6-557P-201, Transcript of RNA, U6 small nuclear 557, pseudogene, humanhuman

BASIC

Gene RNU6-557P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-557P-201ENST00000516842 AEBP2Q6ZN18 517 aaPredicted RBP10.4□□□□□ -0.74
RNU6-557P-201ENST00000516842 CHIC1Q5VXU3 224 aa9.54□□□□□ -0.88
RNU6-557P-201ENST00000516842 POTEDQ86YR6 584 aa8.98□□□□□ -0.97
RNU6-557P-201ENST00000516842 SENP3Q9H4L4 574 aaPredicted RBP8.81□□□□□ -1
RNU6-557P-201ENST00000516842 PHF23Q9BUL5 403 aaPredicted RBP8.7□□□□□ -1.02
RNU6-557P-201ENST00000516842 FOXD1Q16676 465 aa8.4□□□□□ -1.06
RNU6-557P-201ENST00000516842 MSH5O43196 834 aa7.97□□□□□ -1.13
RNU6-557P-201ENST00000516842 PIAS4Q8N2W9 510 aaPredicted RBP7.67□□□□□ -1.18
RNU6-557P-201ENST00000516842 PPP6R1Q9UPN7 881 aa7.43□□□□□ -1.22
RNU6-557P-201ENST00000516842 ADRA2BP18089 450 aa7.36□□□□□ -1.23
RNU6-557P-201ENST00000516842 CACNB1Q02641 598 aaPredicted RBP7.32□□□□□ -1.24
RNU6-557P-201ENST00000516842 MAPK8IP2Q13387 824 aaPredicted RBP6.99□□□□□ -1.29
RNU6-557P-201ENST00000516842 PLPPR3Q6T4P5 718 aa6.98□□□□□ -1.29
RNU6-557P-201ENST00000516842 DMRT2Q9Y5R5 561 aa6.92□□□□□ -1.3
RNU6-557P-201ENST00000516842 POTEHQ6S545 545 aa6.9□□□□□ -1.3
RNU6-557P-201ENST00000516842 RNF39Q9H2S5 420 aa6.81□□□□□ -1.32
RNU6-557P-201ENST00000516842 DCAF8L1A6NGE4 600 aa6.75□□□□□ -1.33
RNU6-557P-201ENST00000516842 C1QBPQ07021 282 aaKnown RBP6.61□□□□□ -1.35
RNU6-557P-201ENST00000516842 SCAF1Q9H7N4 1312 aaKnown RBP6.54□□□□□ -1.36
RNU6-557P-201ENST00000516842 HOXD11P31277 338 aaPredicted RBP6.4□□□□□ -1.38
RNU6-557P-201ENST00000516842 DSG3P32926 999 aa6.19□□□□□ -1.42
RNU6-557P-201ENST00000516842 DNAJC5BQ9UF47 199 aa6.18□□□□□ -1.42
RNU6-557P-201ENST00000516842 RNF216Q9NWF9 866 aaPredicted RBP6.17□□□□□ -1.42
RNU6-557P-201ENST00000516842 SP7Q8TDD2 431 aaPredicted RBP6.15□□□□□ -1.42
RNU6-557P-201ENST00000516842 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.14□□□□□ -1.43
RNU6-557P-201ENST00000516842 SPINK5Q9NQ38 1064 aaPredicted RBP6.12□□□□□ -1.43
RNU6-557P-201ENST00000516842 CAPN15O75808 1086 aa6.09□□□□□ -1.43
RNU6-557P-201ENST00000516842 PPP4R3CPQ6ZMV5 832 aa6.09□□□□□ -1.43
RNU6-557P-201ENST00000516842 CNKSR2Q8WXI2 1034 aa6.07□□□□□ -1.44
RNU6-557P-201ENST00000516842 CHRDL2Q6WN34 429 aa6.03□□□□□ -1.44
RNU6-557P-201ENST00000516842 PLSCR2Q9NRY7 297 aa6.01□□□□□ -1.45
RNU6-557P-201ENST00000516842 U3KPZ7 1027 aaPredicted RBP5.97□□□□□ -1.45
RNU6-557P-201ENST00000516842 ABCB7O75027 752 aa5.95□□□□□ -1.46
RNU6-557P-201ENST00000516842 TRHP20396 242 aaPredicted RBP5.86□□□□□ -1.47
RNU6-557P-201ENST00000516842 HAX1O00165 279 aa5.85□□□□□ -1.47
RNU6-557P-201ENST00000516842 EVX2Q03828 476 aa5.82□□□□□ -1.48
RNU6-557P-201ENST00000516842 RBM42Q9BTD8 480 aaKnown RBP5.8□□□□□ -1.48
RNU6-557P-201ENST00000516842 PIP4P2Q8N4L2 257 aa5.78□□□□□ -1.48
RNU6-557P-201ENST00000516842 LHX8Q68G74 356 aa5.77□□□□□ -1.49
RNU6-557P-201ENST00000516842 ZNF219Q9P2Y4 722 aaPredicted RBP5.7□□□□□ -1.5
RNU6-557P-201ENST00000516842 NPM3O75607 178 aaKnown RBP5.6□□□□□ -1.51
RNU6-557P-201ENST00000516842 FXR2P51116 673 aaKnown RBP eCLIP5.6□□□□□ -1.51
RNU6-557P-201ENST00000516842 REM2Q8IYK8 340 aaPredicted RBP5.6□□□□□ -1.51
RNU6-557P-201ENST00000516842 AKT1S1Q96B36 256 aa5.58□□□□□ -1.52
RNU6-557P-201ENST00000516842 NCBP3Q53F19 620 aaKnown RBP5.57□□□□□ -1.52
RNU6-557P-201ENST00000516842 PITPNM1O00562 1244 aa5.56□□□□□ -1.52
RNU6-557P-201ENST00000516842 GABBR2O75899 941 aa5.56□□□□□ -1.52
RNU6-557P-201ENST00000516842 SLC4A2P04920 1241 aa5.55□□□□□ -1.52
RNU6-557P-201ENST00000516842 POLA2Q14181 598 aa5.54□□□□□ -1.52
RNU6-557P-201ENST00000516842 APLP2Q06481 763 aa5.53□□□□□ -1.52
RNU6-557P-201ENST00000516842 POTEMA6NI47 508 aa5.49□□□□□ -1.53
RNU6-557P-201ENST00000516842 POTEIP0CG38 1075 aa5.49□□□□□ -1.53
RNU6-557P-201ENST00000516842 POTEGQ6S5H5 508 aa5.45□□□□□ -1.54
RNU6-557P-201ENST00000516842 C19orf67A6NJJ6 358 aa5.44□□□□□ -1.54
RNU6-557P-201ENST00000516842 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.42□□□□□ -1.54
RNU6-557P-201ENST00000516842 HNRNPUL2Q1KMD3 747 aaKnown RBP5.42□□□□□ -1.54
RNU6-557P-201ENST00000516842 OSCARQ8IYS5 282 aa5.41□□□□□ -1.54
RNU6-557P-201ENST00000516842 PRKAR2AP13861 404 aaKnown RBP5.4□□□□□ -1.54
RNU6-557P-201ENST00000516842 SAMD1Q6SPF0 538 aaPredicted RBP5.4□□□□□ -1.54
RNU6-557P-201ENST00000516842 OTUD5Q96G74 571 aa5.38□□□□□ -1.55
RNU6-557P-201ENST00000516842 POTEB2H3BUK9 544 aa5.32□□□□□ -1.56
RNU6-557P-201ENST00000516842 CHADLQ6NUI6 762 aa5.28□□□□□ -1.56
RNU6-557P-201ENST00000516842 PCDH10Q9P2E7 1040 aa5.28□□□□□ -1.56
RNU6-557P-201ENST00000516842 CLEC11AQ9Y240 323 aa5.26□□□□□ -1.57
RNU6-557P-201ENST00000516842 LCE2DQ5TA82 110 aaPredicted RBP5.25□□□□□ -1.57
RNU6-557P-201ENST00000516842 DCBLD2Q96PD2 775 aa5.24□□□□□ -1.57
RNU6-557P-201ENST00000516842 ZBTB12Q9Y330 459 aaPredicted RBP5.22□□□□□ -1.57
RNU6-557P-201ENST00000516842 ATF5Q9Y2D1 282 aaPredicted RBP5.21□□□□□ -1.58
RNU6-557P-201ENST00000516842 CD44P16070 742 aaKnown RBP5.18□□□□□ -1.58
RNU6-557P-201ENST00000516842 FAM163AQ96GL9 167 aaPredicted RBP5.18□□□□□ -1.58
RNU6-557P-201ENST00000516842 SPDYE1Q8NFV5 336 aaPredicted RBP5.15□□□□□ -1.59
RNU6-557P-201ENST00000516842 POTEJP0CG39 1038 aa5.13□□□□□ -1.59
RNU6-557P-201ENST00000516842 MYCNP04198 464 aaPredicted RBP5.12□□□□□ -1.59
RNU6-557P-201ENST00000516842 GALR2O43603 387 aaPredicted RBP5.11□□□□□ -1.59
RNU6-557P-201ENST00000516842 CDAN1Q8IWY9 1227 aa5.1□□□□□ -1.59
RNU6-557P-201ENST00000516842 PELP1Q8IZL8 1130 aaKnown RBP5.1□□□□□ -1.59
RNU6-557P-201ENST00000516842 SPDYE2BA6NHP3 402 aa5.07□□□□□ -1.6
RNU6-557P-201ENST00000516842 SPDYE6P0CI01 402 aa5.07□□□□□ -1.6
RNU6-557P-201ENST00000516842 SPDYE2Q495Y8 402 aa5.07□□□□□ -1.6
RNU6-557P-201ENST00000516842 MMRN1Q13201 1228 aa5.05□□□□□ -1.6
RNU6-557P-201ENST00000516842 FARP1Q9Y4F1 1045 aaPredicted RBP5.05□□□□□ -1.6
RNU6-557P-201ENST00000516842 CLCN6P51797 869 aa5.04□□□□□ -1.6
RNU6-557P-201ENST00000516842 PRR29P0C7W0 189 aa5.03□□□□□ -1.6
RNU6-557P-201ENST00000516842 ZNF579Q8NAF0 562 aaKnown RBP5.03□□□□□ -1.6
RNU6-557P-201ENST00000516842 ZRANB1Q9UGI0 708 aa5.02□□□□□ -1.61
RNU6-557P-201ENST00000516842 SPNS2Q8IVW8 549 aa5□□□□□ -1.61
RNU6-557P-201ENST00000516842 KCNA4P22459 653 aa4.99□□□□□ -1.61
RNU6-557P-201ENST00000516842 METRNQ9UJH8 293 aa4.99□□□□□ -1.61
RNU6-557P-201ENST00000516842 ZNF692Q9BU19 519 aaPredicted RBP4.97□□□□□ -1.61
RNU6-557P-201ENST00000516842 SSUH2Q9Y2M2 353 aa4.97□□□□□ -1.61
RNU6-557P-201ENST00000516842 PHF12Q96QT6 1004 aa4.95□□□□□ -1.62
RNU6-557P-201ENST00000516842 MAMSTRQ6ZN01 415 aa4.94□□□□□ -1.62
RNU6-557P-201ENST00000516842 SCUBE2Q9NQ36 999 aa4.92□□□□□ -1.62
RNU6-557P-201ENST00000516842 MKRN4PQ13434 485 aaPredicted RBP4.9□□□□□ -1.63
RNU6-557P-201ENST00000516842 C7P10643 843 aa4.89□□□□□ -1.63
RNU6-557P-201ENST00000516842 PABPN1Q86U42 306 aaKnown RBP eCLIP4.89□□□□□ -1.63
RNU6-557P-201ENST00000516842 SLC39A7Q92504 469 aa4.89□□□□□ -1.63
RNU6-557P-201ENST00000516842 POTEFA5A3E0 1075 aa4.88□□□□□ -1.63
RNU6-557P-201ENST00000516842 ATMINO43313 823 aaPredicted RBP4.88□□□□□ -1.63
RNU6-557P-201ENST00000516842 ST18O60284 1047 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms