RNA–Protein interactions for RNA: ENST00000392632.6

UBR3-202, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 5,129 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-202ENST00000392632 DKC1O60832 514 aaKnown RBP eCLIP4.59□□□□□ -1.67
UBR3-202ENST00000392632 ZWINTO95229 277 aa4.59□□□□□ -1.67
UBR3-202ENST00000392632 UBA7P41226 1012 aa4.59□□□□□ -1.67
UBR3-202ENST00000392632 TMTC2Q8N394 836 aa4.59□□□□□ -1.67
UBR3-202ENST00000392632 PSMD1Q99460 953 aa4.59□□□□□ -1.67
UBR3-202ENST00000392632 ZNF219Q9P2Y4 722 aaPredicted RBP4.59□□□□□ -1.67
UBR3-202ENST00000392632 SLC12A7Q9Y666 1083 aa4.59□□□□□ -1.67
UBR3-202ENST00000392632 SYNJ2O15056 1496 aa4.59□□□□□ -1.67
UBR3-202ENST00000392632 ATP2A1O14983 1001 aa4.59□□□□□ -1.67
UBR3-202ENST00000392632 ZSCAN12O43309 604 aa4.59□□□□□ -1.67
UBR3-202ENST00000392632 GAS8O95995 478 aa4.59□□□□□ -1.67
UBR3-202ENST00000392632 ARL1P40616 181 aaPredicted RBP4.59□□□□□ -1.67
UBR3-202ENST00000392632 IFFO1Q0D2I5 559 aa4.59□□□□□ -1.67
UBR3-202ENST00000392632 KANK3Q6NY19 840 aa4.59□□□□□ -1.67
UBR3-202ENST00000392632 MPRIPQ6WCQ1 1025 aa4.59□□□□□ -1.67
UBR3-202ENST00000392632 IFNL2Q8IZJ0 200 aa4.59□□□□□ -1.67
UBR3-202ENST00000392632 STK11IPQ8N1F8 1099 aa4.59□□□□□ -1.67
UBR3-202ENST00000392632 PPP1R14CQ8TAE6 165 aa4.59□□□□□ -1.67
UBR3-202ENST00000392632 KAT14Q9H8E8 782 aa4.59□□□□□ -1.67
UBR3-202ENST00000392632 DAPK1P53355 1430 aa4.59□□□□□ -1.67
UBR3-202ENST00000392632 MSH6P52701 1360 aa4.59□□□□□ -1.67
UBR3-202ENST00000392632 ANKRD50Q9ULJ7 1429 aa4.59□□□□□ -1.68
UBR3-202ENST00000392632 LIG1P18858 919 aa4.59□□□□□ -1.68
UBR3-202ENST00000392632 GSE1Q14687 1217 aa4.59□□□□□ -1.68
UBR3-202ENST00000392632 CCDC40Q4G0X9 1142 aa4.59□□□□□ -1.68
UBR3-202ENST00000392632 WDR63Q8IWG1 891 aa4.59□□□□□ -1.68
UBR3-202ENST00000392632 SETDB2Q96T68 719 aa4.59□□□□□ -1.68
UBR3-202ENST00000392632 CACYBPQ9HB71 228 aaKnown RBP4.59□□□□□ -1.68
UBR3-202ENST00000392632 PDRG1Q9NUG6 133 aa4.59□□□□□ -1.68
UBR3-202ENST00000392632 PUF60Q9UHX1 559 aaKnown RBP4.59□□□□□ -1.68
UBR3-202ENST00000392632 TSPY2A6NKD2 308 aa4.59□□□□□ -1.68
UBR3-202ENST00000392632 ZNF213O14771 459 aa4.59□□□□□ -1.68
UBR3-202ENST00000392632 SH3BP5O60239 455 aa4.59□□□□□ -1.68
UBR3-202ENST00000392632 CCDC175P0C221 793 aa4.59□□□□□ -1.68
UBR3-202ENST00000392632 TCIRG1Q13488 830 aa4.59□□□□□ -1.68
UBR3-202ENST00000392632 SPECC1Q5M775 1068 aa4.59□□□□□ -1.68
UBR3-202ENST00000392632 TCERG1LQ5VWI1 586 aa4.59□□□□□ -1.68
UBR3-202ENST00000392632 CCDC89Q8N998 374 aa4.59□□□□□ -1.68
UBR3-202ENST00000392632 TBC1D5Q92609 795 aa4.59□□□□□ -1.68
UBR3-202ENST00000392632 CCDC77Q9BR77 488 aa4.59□□□□□ -1.68
UBR3-202ENST00000392632 CABP1Q9NZU7 370 aa4.59□□□□□ -1.68
UBR3-202ENST00000392632 FANCD2Q9BXW9 1451 aa4.58□□□□□ -1.68
UBR3-202ENST00000392632 YEATS4O95619 227 aa4.58□□□□□ -1.68
UBR3-202ENST00000392632 MAP4K4O95819 1239 aaPredicted RBP4.58□□□□□ -1.68
UBR3-202ENST00000392632 NASPP49321 788 aaPredicted RBP4.58□□□□□ -1.68
UBR3-202ENST00000392632 CEBPZQ03701 1054 aaKnown RBP4.58□□□□□ -1.68
UBR3-202ENST00000392632 TDRD12Q587J7 1177 aaKnown RBP4.58□□□□□ -1.68
UBR3-202ENST00000392632 AFAP1Q8N556 730 aa4.58□□□□□ -1.68
UBR3-202ENST00000392632 FAM114A2Q9NRY5 505 aa4.58□□□□□ -1.68
UBR3-202ENST00000392632 RTEL1Q9NZ71 1219 aa4.58□□□□□ -1.68
UBR3-202ENST00000392632 CALM1P0DP23 149 aa4.58□□□□□ -1.68
UBR3-202ENST00000392632 CALM2P0DP24 149 aa4.58□□□□□ -1.68
UBR3-202ENST00000392632 CALM3P0DP25 149 aa4.58□□□□□ -1.68
UBR3-202ENST00000392632 TAF7Q15545 349 aaPredicted RBP4.58□□□□□ -1.68
UBR3-202ENST00000392632 NAP1L4Q99733 375 aaKnown RBP4.58□□□□□ -1.68
UBR3-202ENST00000392632 SCAND2PQ9GZW5 306 aaPredicted RBP4.58□□□□□ -1.68
UBR3-202ENST00000392632 IQCGQ9H095 443 aaKnown RBP4.58□□□□□ -1.68
UBR3-202ENST00000392632 DBF4Q9UBU7 674 aaPredicted RBP4.58□□□□□ -1.68
UBR3-202ENST00000392632 IFIT3O14879 490 aaKnown RBP4.58□□□□□ -1.68
UBR3-202ENST00000392632 CTAGE5O15320 804 aa4.58□□□□□ -1.68
UBR3-202ENST00000392632 HMGB3O15347 200 aaKnown RBP4.58□□□□□ -1.68
UBR3-202ENST00000392632 IDEP14735 1019 aa4.58□□□□□ -1.68
UBR3-202ENST00000392632 EXOSC9Q06265 439 aaKnown RBP4.58□□□□□ -1.68
UBR3-202ENST00000392632 CFAP70Q5T0N1 1121 aa4.58□□□□□ -1.68
UBR3-202ENST00000392632 SPECC1LQ69YQ0 1117 aa4.58□□□□□ -1.68
UBR3-202ENST00000392632 ELMSAN1Q6PJG2 1045 aa4.58□□□□□ -1.68
UBR3-202ENST00000392632 TPTE2Q6XPS3 522 aa4.58□□□□□ -1.68
UBR3-202ENST00000392632 ZNF804AQ7Z570 1209 aa4.58□□□□□ -1.68
UBR3-202ENST00000392632 OTUD6BQ8N6M0 293 aa4.58□□□□□ -1.68
UBR3-202ENST00000392632 CDCA7Q9BWT1 371 aaPredicted RBP4.58□□□□□ -1.68
UBR3-202ENST00000392632 SH2B1Q9NRF2 756 aaPredicted RBP4.58□□□□□ -1.68
UBR3-202ENST00000392632 MKRN1Q9UHC7 482 aaKnown RBP4.58□□□□□ -1.68
UBR3-202ENST00000392632 KCNG1Q9UIX4 513 aa4.58□□□□□ -1.68
UBR3-202ENST00000392632 ODF2LQ9ULJ1 636 aa4.58□□□□□ -1.68
UBR3-202ENST00000392632 GOLGA6L9A6NEM1 432 aa4.58□□□□□ -1.68
UBR3-202ENST00000392632 POLR3GO15318 223 aaPredicted RBP4.58□□□□□ -1.68
UBR3-202ENST00000392632 BAG6P46379 1132 aa4.58□□□□□ -1.68
UBR3-202ENST00000392632 EIF6P56537 245 aaKnown RBP4.58□□□□□ -1.68
UBR3-202ENST00000392632 SSRP1Q08945 709 aaKnown RBP4.58□□□□□ -1.68
UBR3-202ENST00000392632 CFAP100Q494V2 611 aa4.58□□□□□ -1.68
UBR3-202ENST00000392632 TAF3Q5VWG9 929 aa4.58□□□□□ -1.68
UBR3-202ENST00000392632 LDHAL6AQ6ZMR3 332 aa4.58□□□□□ -1.68
UBR3-202ENST00000392632 PDCL2Q8N4E4 241 aa4.58□□□□□ -1.68
UBR3-202ENST00000392632 CEP112Q8N8E3 955 aa4.58□□□□□ -1.68
UBR3-202ENST00000392632 GOLGA1Q92805 767 aa4.58□□□□□ -1.68
UBR3-202ENST00000392632 NUP62CLQ9H1M0 184 aa4.58□□□□□ -1.68
UBR3-202ENST00000392632 NPHP3Q7Z494 1330 aa4.57□□□□□ -1.68
UBR3-202ENST00000392632 GAPVD1Q14C86 1478 aa4.57□□□□□ -1.68
UBR3-202ENST00000392632 KIF5CO60282 957 aa4.57□□□□□ -1.68
UBR3-202ENST00000392632 OTUD7BQ6GQQ9 843 aa4.57□□□□□ -1.68
UBR3-202ENST00000392632 C8orf76Q96K31 380 aa4.57□□□□□ -1.68
UBR3-202ENST00000392632 JAKMIP1Q96N16 626 aaKnown RBP4.57□□□□□ -1.68
UBR3-202ENST00000392632 ANO10Q9NW15 660 aa4.57□□□□□ -1.68
UBR3-202ENST00000392632 SHTN1A0MZ66 631 aa4.57□□□□□ -1.68
UBR3-202ENST00000392632 GMNNO75496 209 aa4.57□□□□□ -1.68
UBR3-202ENST00000392632 ZFYP08048 801 aaPredicted RBP4.57□□□□□ -1.68
UBR3-202ENST00000392632 MTIF2P46199 727 aaKnown RBP4.57□□□□□ -1.68
UBR3-202ENST00000392632 KMT5BQ4FZB7 885 aa4.57□□□□□ -1.68
UBR3-202ENST00000392632 MICALCLQ6ZW33 695 aa4.57□□□□□ -1.68
UBR3-202ENST00000392632 EHBP1Q8NDI1 1231 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms