RNA–Protein interactions for RNA: ENSMUST00000187758.6

Usp40-204, Transcript of Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Usp40, Length 3,977 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40-204ENSMUST00000187758 Prr29B1ARI9 187 aa9.25□□□□□ -0.93
Usp40-204ENSMUST00000187758 GpkowQ56A08 488 aa9.25□□□□□ -0.93
Usp40-204ENSMUST00000187758 Afg3l2Q8JZQ2 802 aaKnown RBP9.25□□□□□ -0.93
Usp40-204ENSMUST00000187758 Cyp46a1Q9WVK8 500 aa9.25□□□□□ -0.93
Usp40-204ENSMUST00000187758 Ddx60E9PZQ1 1711 aa9.25□□□□□ -0.93
Usp40-204ENSMUST00000187758 Ccdc183A2AJB1 534 aa9.25□□□□□ -0.93
Usp40-204ENSMUST00000187758 Mcmdc2E9Q956 681 aa9.25□□□□□ -0.93
Usp40-204ENSMUST00000187758 Pnmal2G3X9N3 661 aa9.25□□□□□ -0.93
Usp40-204ENSMUST00000187758 VgfQ0VGU4 617 aa9.25□□□□□ -0.93
Usp40-204ENSMUST00000187758 NexnQ7TPW1 607 aa9.25□□□□□ -0.93
Usp40-204ENSMUST00000187758 Ripor2Q80U16 1078 aa9.25□□□□□ -0.93
Usp40-204ENSMUST00000187758 Strn4P58404 760 aa9.25□□□□□ -0.93
Usp40-204ENSMUST00000187758 Tgfb1i1Q62219 461 aa9.25□□□□□ -0.93
Usp40-204ENSMUST00000187758 Cog6Q8R3I3 657 aa9.25□□□□□ -0.93
Usp40-204ENSMUST00000187758 Lrit1Q8K099 624 aa9.24□□□□□ -0.93
Usp40-204ENSMUST00000187758 Arhgap33Q80YF9 1305 aa9.24□□□□□ -0.93
Usp40-204ENSMUST00000187758 Atg4a-psA0A0G2JFS9 396 aa9.24□□□□□ -0.93
Usp40-204ENSMUST00000187758 Fbln2P37889 1221 aa9.24□□□□□ -0.93
Usp40-204ENSMUST00000187758 Nol10Q5RJG1 687 aaKnown RBP9.24□□□□□ -0.93
Usp40-204ENSMUST00000187758 Pknox2Q8BG99 474 aa9.24□□□□□ -0.93
Usp40-204ENSMUST00000187758 Atg4aQ8C9S8 396 aa9.24□□□□□ -0.93
Usp40-204ENSMUST00000187758 Kiaa0319lQ8K135 1048 aa9.24□□□□□ -0.93
Usp40-204ENSMUST00000187758 Fbxo41Q6NS60 873 aa9.24□□□□□ -0.93
Usp40-204ENSMUST00000187758 Ppp6r1Q7TSI3 856 aa9.24□□□□□ -0.93
Usp40-204ENSMUST00000187758 AbraQ8BUZ1 375 aa9.24□□□□□ -0.93
Usp40-204ENSMUST00000187758 Fam213aQ9CYH2 218 aa9.24□□□□□ -0.93
Usp40-204ENSMUST00000187758 Wdr63B2RY71 923 aa9.23□□□□□ -0.93
Usp40-204ENSMUST00000187758 AK157302I3ITR1 129 aa9.23□□□□□ -0.93
Usp40-204ENSMUST00000187758 Ipo8Q7TMY7 1010 aa9.23□□□□□ -0.93
Usp40-204ENSMUST00000187758 Ttc19Q8CC21 365 aa9.23□□□□□ -0.93
Usp40-204ENSMUST00000187758 Isca1Q9D924 129 aa9.23□□□□□ -0.93
Usp40-204ENSMUST00000187758 Col4a1P02463 1669 aa9.23□□□□□ -0.93
Usp40-204ENSMUST00000187758 Prr5lA2AVJ5 370 aa9.23□□□□□ -0.93
Usp40-204ENSMUST00000187758 Adam1aQ60813 791 aa9.23□□□□□ -0.93
Usp40-204ENSMUST00000187758 Esco1Q69Z69 843 aa9.23□□□□□ -0.93
Usp40-204ENSMUST00000187758 Cypt2Q6P924 180 aa9.23□□□□□ -0.93
Usp40-204ENSMUST00000187758 Slf2Q6P9P0 1278 aa9.23□□□□□ -0.93
Usp40-204ENSMUST00000187758 Ehd4Q9EQP2 541 aa9.23□□□□□ -0.93
Usp40-204ENSMUST00000187758 Ltb4r2Q9JJL9 360 aa9.23□□□□□ -0.93
Usp40-204ENSMUST00000187758 Sos2Q02384 1333 aa9.23□□□□□ -0.93
Usp40-204ENSMUST00000187758 Q8C5K5 320 aa9.23□□□□□ -0.93
Usp40-204ENSMUST00000187758 Ak7Q9D2H2 614 aa9.23□□□□□ -0.93
Usp40-204ENSMUST00000187758 InsrrQ9WTL4 1300 aa9.23□□□□□ -0.93
Usp40-204ENSMUST00000187758 Pa2g4P50580 394 aaKnown RBP9.22□□□□□ -0.93
Usp40-204ENSMUST00000187758 Rtn4Q99P72 1162 aaKnown RBP9.22□□□□□ -0.93
Usp40-204ENSMUST00000187758 Trim34aQ99PP6 485 aa9.22□□□□□ -0.93
Usp40-204ENSMUST00000187758 Hoxa7P02830 229 aa9.22□□□□□ -0.93
Usp40-204ENSMUST00000187758 Cct4P80315 539 aaKnown RBP9.22□□□□□ -0.93
Usp40-204ENSMUST00000187758 Tmem87bQ8BKU8 555 aa9.22□□□□□ -0.93
Usp40-204ENSMUST00000187758 Nsfl1cQ9CZ44 370 aaKnown RBP9.22□□□□□ -0.93
Usp40-204ENSMUST00000187758 AppP12023 770 aa9.22□□□□□ -0.93
Usp40-204ENSMUST00000187758 GalcP54818 684 aa9.22□□□□□ -0.93
Usp40-204ENSMUST00000187758 DaxxO35613 739 aa9.21□□□□□ -0.93
Usp40-204ENSMUST00000187758 Hsp90ab1P11499 724 aaKnown RBP9.21□□□□□ -0.93
Usp40-204ENSMUST00000187758 Lrrc43Q3V0L5 667 aa9.21□□□□□ -0.93
Usp40-204ENSMUST00000187758 BcanQ61361 883 aa9.21□□□□□ -0.93
Usp40-204ENSMUST00000187758 Nlrp9bQ66X22 1003 aa9.21□□□□□ -0.93
Usp40-204ENSMUST00000187758 Chmp3Q9CQ10 224 aa9.21□□□□□ -0.93
Usp40-204ENSMUST00000187758 NgdnQ9DB96 315 aaKnown RBP9.21□□□□□ -0.93
Usp40-204ENSMUST00000187758 Ric1Q69ZJ7 1422 aa9.21□□□□□ -0.94
Usp40-204ENSMUST00000187758 CanxP35564 591 aaKnown RBP9.21□□□□□ -0.94
Usp40-204ENSMUST00000187758 Ifit1bl2Q3U687 466 aa9.21□□□□□ -0.94
Usp40-204ENSMUST00000187758 Ankrd13dQ6PD24 605 aa9.21□□□□□ -0.94
Usp40-204ENSMUST00000187758 GptQ8QZR5 496 aa9.21□□□□□ -0.94
Usp40-204ENSMUST00000187758 Kndc1Q0KK55 1742 aa9.21□□□□□ -0.94
Usp40-204ENSMUST00000187758 Zkscan2G3X952 960 aa9.2□□□□□ -0.94
Usp40-204ENSMUST00000187758 Adora1Q60612 326 aa9.2□□□□□ -0.94
Usp40-204ENSMUST00000187758 Ptpdc1Q6NZK8 747 aa9.2□□□□□ -0.94
Usp40-204ENSMUST00000187758 Zbtb3Q91X45 518 aa9.2□□□□□ -0.94
Usp40-204ENSMUST00000187758 Bcar3Q9QZK2 820 aa9.2□□□□□ -0.94
Usp40-204ENSMUST00000187758 Mfap1aC0HKD8 439 aaKnown RBP9.2□□□□□ -0.94
Usp40-204ENSMUST00000187758 Mfap1bC0HKD9 439 aaKnown RBP9.2□□□□□ -0.94
Usp40-204ENSMUST00000187758 Hmox1P14901 289 aa9.2□□□□□ -0.94
Usp40-204ENSMUST00000187758 Kiaa0319Q5SZV5 1081 aa9.2□□□□□ -0.94
Usp40-204ENSMUST00000187758 Nek4Q9Z1J2 792 aa9.2□□□□□ -0.94
Usp40-204ENSMUST00000187758 Gm13023A2A8N2 498 aa9.2□□□□□ -0.94
Usp40-204ENSMUST00000187758 Igflr1Q3U4N7 345 aa9.2□□□□□ -0.94
Usp40-204ENSMUST00000187758 Slfnl1Q8BHW9 410 aa9.2□□□□□ -0.94
Usp40-204ENSMUST00000187758 Mapk8ip1Q9WVI9 707 aa9.2□□□□□ -0.94
Usp40-204ENSMUST00000187758 Abcc4E9Q236 1325 aa9.19□□□□□ -0.94
Usp40-204ENSMUST00000187758 Mrc1Q61830 1456 aa9.19□□□□□ -0.94
Usp40-204ENSMUST00000187758 Jarid2Q62315 1234 aa9.19□□□□□ -0.94
Usp40-204ENSMUST00000187758 Clca2Q8BG22 942 aa9.19□□□□□ -0.94
Usp40-204ENSMUST00000187758 Eif2s2Q99L45 331 aaKnown RBP9.19□□□□□ -0.94
Usp40-204ENSMUST00000187758 Prl3d2F6R3P9 224 aa9.18□□□□□ -0.94
Usp40-204ENSMUST00000187758 Trim34bJ3QNR8 485 aa9.18□□□□□ -0.94
Usp40-204ENSMUST00000187758 Cops6O88545 324 aa9.18□□□□□ -0.94
Usp40-204ENSMUST00000187758 Hmgb2P30681 210 aaKnown RBP9.18□□□□□ -0.94
Usp40-204ENSMUST00000187758 Abca3Q8R420 1704 aa9.18□□□□□ -0.94
Usp40-204ENSMUST00000187758 Fkbp1aP26883 108 aaKnown RBP9.18□□□□□ -0.94
Usp40-204ENSMUST00000187758 Ssc5dQ8BV57 1371 aa9.18□□□□□ -0.94
Usp40-204ENSMUST00000187758 Neurod6P48986 337 aa9.18□□□□□ -0.94
Usp40-204ENSMUST00000187758 Atp1b3P97370 278 aa9.18□□□□□ -0.94
Usp40-204ENSMUST00000187758 RtcbQ99LF4 505 aaKnown RBP9.18□□□□□ -0.94
Usp40-204ENSMUST00000187758 Q9D2X8 372 aa9.18□□□□□ -0.94
Usp40-204ENSMUST00000187758 Prl3d3A0A0M6L0J6 224 aa9.17□□□□□ -0.94
Usp40-204ENSMUST00000187758 Rbm27Q5SFM8 1060 aaKnown RBP9.17□□□□□ -0.94
Usp40-204ENSMUST00000187758 Cyp7a1Q64505 503 aa9.17□□□□□ -0.94
Usp40-204ENSMUST00000187758 HmcesQ8R1M0 353 aaKnown RBP9.17□□□□□ -0.94
Usp40-204ENSMUST00000187758 Trip6Q9Z1Y4 480 aa9.17□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 25.4 ms