RNA–Protein interactions for RNA: ENSMUST00000170033.1

Lig4-202, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 3,105 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-202ENSMUST00000170033 SowahcQ8C0J6 512 aa7.54□□□□□ -1.2
Lig4-202ENSMUST00000170033 Ssr1Q9CY50 286 aaKnown RBP7.54□□□□□ -1.2
Lig4-202ENSMUST00000170033 Disp3A3KFU9 1347 aa7.54□□□□□ -1.2
Lig4-202ENSMUST00000170033 Triml2E9PW10 424 aa7.54□□□□□ -1.2
Lig4-202ENSMUST00000170033 UncxO08934 530 aa7.54□□□□□ -1.2
Lig4-202ENSMUST00000170033 Gse1Q3U3C9 1213 aa7.54□□□□□ -1.2
Lig4-202ENSMUST00000170033 HellsQ60848 821 aa7.54□□□□□ -1.2
Lig4-202ENSMUST00000170033 Nutm1Q8BHP2 1126 aa7.54□□□□□ -1.2
Lig4-202ENSMUST00000170033 Bag4Q8CI61 457 aa7.54□□□□□ -1.2
Lig4-202ENSMUST00000170033 KinQ8K339 391 aa7.54□□□□□ -1.2
Lig4-202ENSMUST00000170033 Vwa3bJ9JI28 736 aa7.54□□□□□ -1.2
Lig4-202ENSMUST00000170033 SlkO54988 1233 aa7.54□□□□□ -1.2
Lig4-202ENSMUST00000170033 SrrtQ99MR6 875 aaKnown RBP7.54□□□□□ -1.2
Lig4-202ENSMUST00000170033 Tjp1P39447 1745 aaKnown RBP7.53□□□□□ -1.2
Lig4-202ENSMUST00000170033 Capn2O08529 700 aa7.53□□□□□ -1.2
Lig4-202ENSMUST00000170033 Rrm1P07742 792 aa7.53□□□□□ -1.2
Lig4-202ENSMUST00000170033 Idi1P58044 227 aa7.53□□□□□ -1.2
Lig4-202ENSMUST00000170033 Rhbdl3P58873 404 aa7.53□□□□□ -1.2
Lig4-202ENSMUST00000170033 Mcm10Q0VBD2 885 aa7.53□□□□□ -1.2
Lig4-202ENSMUST00000170033 Erich6bQ9D4S6 220 aa7.53□□□□□ -1.2
Lig4-202ENSMUST00000170033 Mybbp1aQ7TPV4 1344 aaKnown RBP7.53□□□□□ -1.2
Lig4-202ENSMUST00000170033 Col18a1P39061 1774 aa7.53□□□□□ -1.2
Lig4-202ENSMUST00000170033 Col1a2Q01149 1372 aa7.53□□□□□ -1.2
Lig4-202ENSMUST00000170033 Psen1P49769 467 aa7.53□□□□□ -1.2
Lig4-202ENSMUST00000170033 Q3TQI7 289 aaKnown RBP7.53□□□□□ -1.2
Lig4-202ENSMUST00000170033 Bank1Q80VH0 783 aa7.53□□□□□ -1.2
Lig4-202ENSMUST00000170033 Tmx3Q8BXZ1 456 aa7.53□□□□□ -1.2
Lig4-202ENSMUST00000170033 Tfip11Q9ERA6 838 aaKnown RBP7.53□□□□□ -1.2
Lig4-202ENSMUST00000170033 Gm7361D3Z6R1 267 aa7.52□□□□□ -1.21
Lig4-202ENSMUST00000170033 Tubb6Q922F4 447 aa7.52□□□□□ -1.21
Lig4-202ENSMUST00000170033 DccP70211 1447 aa7.52□□□□□ -1.21
Lig4-202ENSMUST00000170033 Gm10563F6WIE4 79 aa7.52□□□□□ -1.21
Lig4-202ENSMUST00000170033 Pax3P24610 479 aa7.52□□□□□ -1.21
Lig4-202ENSMUST00000170033 VgfQ0VGU4 617 aa7.52□□□□□ -1.21
Lig4-202ENSMUST00000170033 Ptpdc1Q6NZK8 747 aa7.52□□□□□ -1.21
Lig4-202ENSMUST00000170033 St18Q80TY4 1045 aa7.52□□□□□ -1.21
Lig4-202ENSMUST00000170033 Ppp1r42Q8R1Z4 357 aa7.52□□□□□ -1.21
Lig4-202ENSMUST00000170033 Apbb1ipQ8R5A3 670 aa7.52□□□□□ -1.21
Lig4-202ENSMUST00000170033 Flt4P35917 1363 aa7.52□□□□□ -1.21
Lig4-202ENSMUST00000170033 Zfyve27Q3TXX3 415 aa7.52□□□□□ -1.21
Lig4-202ENSMUST00000170033 Skida1Q80YR3 822 aa7.52□□□□□ -1.21
Lig4-202ENSMUST00000170033 Cchcr1Q8K2I2 770 aa7.52□□□□□ -1.21
Lig4-202ENSMUST00000170033 Cabp4Q8VHC5 271 aa7.52□□□□□ -1.21
Lig4-202ENSMUST00000170033 Abca3Q8R420 1704 aa7.51□□□□□ -1.21
Lig4-202ENSMUST00000170033 Gm45015A0A140LII9 184 aa7.51□□□□□ -1.21
Lig4-202ENSMUST00000170033 Gm18336A0A140LIU8 765 aa7.51□□□□□ -1.21
Lig4-202ENSMUST00000170033 Fmnl2A2APV2 1086 aa7.51□□□□□ -1.21
Lig4-202ENSMUST00000170033 Plcb2A3KGF7 1181 aa7.51□□□□□ -1.21
Lig4-202ENSMUST00000170033 Cep126Q0VBV7 1103 aa7.51□□□□□ -1.21
Lig4-202ENSMUST00000170033 Ints3Q7TPD0 1041 aaKnown RBP7.51□□□□□ -1.21
Lig4-202ENSMUST00000170033 Trim66Q924W6 1242 aa7.51□□□□□ -1.21
Lig4-202ENSMUST00000170033 Nphp3Q7TNH6 1325 aa7.51□□□□□ -1.21
Lig4-202ENSMUST00000170033 Gm21190A0A0G2JGJ6 266 aa7.51□□□□□ -1.21
Lig4-202ENSMUST00000170033 Zkscan16A2ALW2 728 aa7.51□□□□□ -1.21
Lig4-202ENSMUST00000170033 1700122O11RikJ3QPW6 241 aa7.51□□□□□ -1.21
Lig4-202ENSMUST00000170033 Filip1lQ6P6L0 1131 aa7.51□□□□□ -1.21
Lig4-202ENSMUST00000170033 Srgap3Q812A2 1099 aa7.51□□□□□ -1.21
Lig4-202ENSMUST00000170033 CrebrfQ8CDG5 640 aaKnown RBP7.51□□□□□ -1.21
Lig4-202ENSMUST00000170033 Fez1Q8K0X8 392 aa7.51□□□□□ -1.21
Lig4-202ENSMUST00000170033 RestQ8VIG1 1082 aa7.51□□□□□ -1.21
Lig4-202ENSMUST00000170033 Klhdc4Q921I2 584 aa7.51□□□□□ -1.21
Lig4-202ENSMUST00000170033 Ccdc94Q9D6J3 314 aa7.51□□□□□ -1.21
Lig4-202ENSMUST00000170033 Aox2Q5SGK3 1345 aa7.51□□□□□ -1.21
Lig4-202ENSMUST00000170033 Abca15E9PWH4 1668 aa7.51□□□□□ -1.21
Lig4-202ENSMUST00000170033 TprnA2AI08 749 aaKnown RBP7.5□□□□□ -1.21
Lig4-202ENSMUST00000170033 Eif4a1P60843 406 aaKnown RBP7.5□□□□□ -1.21
Lig4-202ENSMUST00000170033 Utp18Q5SSI6 552 aaKnown RBP7.5□□□□□ -1.21
Lig4-202ENSMUST00000170033 Tbc1d30Q69ZT9 766 aa7.5□□□□□ -1.21
Lig4-202ENSMUST00000170033 NexnQ7TPW1 607 aa7.5□□□□□ -1.21
Lig4-202ENSMUST00000170033 Nsfl1cQ9CZ44 370 aaKnown RBP7.5□□□□□ -1.21
Lig4-202ENSMUST00000170033 Rmi1Q9D4G9 616 aa7.5□□□□□ -1.21
Lig4-202ENSMUST00000170033 Mkrn1Q9QXP6 481 aa7.5□□□□□ -1.21
Lig4-202ENSMUST00000170033 TnrQ8BYI9 1358 aa7.5□□□□□ -1.21
Lig4-202ENSMUST00000170033 Fbxl16A2RT62 479 aa7.5□□□□□ -1.21
Lig4-202ENSMUST00000170033 Fam184aE9PW83 1143 aa7.5□□□□□ -1.21
Lig4-202ENSMUST00000170033 SnrkQ8VDU5 748 aa7.5□□□□□ -1.21
Lig4-202ENSMUST00000170033 Abcc4E9Q236 1325 aa7.5□□□□□ -1.21
Lig4-202ENSMUST00000170033 Wdr17E9Q271 1322 aa7.5□□□□□ -1.21
Lig4-202ENSMUST00000170033 Ier5O89113 308 aa7.49□□□□□ -1.21
Lig4-202ENSMUST00000170033 Ca8P28651 291 aa7.49□□□□□ -1.21
Lig4-202ENSMUST00000170033 Aifm3Q3TY86 605 aa7.49□□□□□ -1.21
Lig4-202ENSMUST00000170033 Rhot2Q8JZN7 620 aa7.49□□□□□ -1.21
Lig4-202ENSMUST00000170033 Tceal9Q9DD24 104 aa7.49□□□□□ -1.21
Lig4-202ENSMUST00000170033 Rad50P70388 1312 aa7.49□□□□□ -1.21
Lig4-202ENSMUST00000170033 Ms4a2P20490 235 aa7.49□□□□□ -1.21
Lig4-202ENSMUST00000170033 Rfx1P48377 963 aa7.49□□□□□ -1.21
Lig4-202ENSMUST00000170033 Ggnbp2Q5SV77 696 aa7.49□□□□□ -1.21
Lig4-202ENSMUST00000170033 Kiaa0232Q80U59 1396 aaKnown RBP7.49□□□□□ -1.21
Lig4-202ENSMUST00000170033 Q9D2X8 372 aa7.49□□□□□ -1.21
Lig4-202ENSMUST00000170033 Tns2Q8CGB6 1400 aa7.49□□□□□ -1.21
Lig4-202ENSMUST00000170033 Ddx46Q569Z5 1032 aaKnown RBP7.49□□□□□ -1.21
Lig4-202ENSMUST00000170033 Ccne1Q61457 408 aa7.49□□□□□ -1.21
Lig4-202ENSMUST00000170033 Trerf1Q8BXJ2 1205 aa7.49□□□□□ -1.21
Lig4-202ENSMUST00000170033 Nol7Q9D7Z3 254 aaKnown RBP7.49□□□□□ -1.21
Lig4-202ENSMUST00000170033 Trim44Q9QXA7 346 aa7.49□□□□□ -1.21
Lig4-202ENSMUST00000170033 Ccdc173A0JLY1 547 aa7.48□□□□□ -1.21
Lig4-202ENSMUST00000170033 Prim1P20664 417 aa7.48□□□□□ -1.21
Lig4-202ENSMUST00000170033 Dnajc2P54103 621 aaKnown RBP7.48□□□□□ -1.21
Lig4-202ENSMUST00000170033 Bend3Q6PAL0 825 aa7.48□□□□□ -1.21
Lig4-202ENSMUST00000170033 RbsnQ80Y56 783 aa7.48□□□□□ -1.21
Retrieved 100 of 22,080 RNA–protein pairs in 17.9 ms