RNA–Protein interactions for RNA: ENSMUST00000077303.3

Ptpra-202, Transcript of Receptor-type tyrosine-protein phosphatase alpha, mousemouse

TSL 1 (best) BASIC

Gene Ptpra, Length 3,066 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpra-202ENSMUST00000077303 Atg4a-psA0A0G2JFS9 396 aa8.23□□□□□ -1.09
Ptpra-202ENSMUST00000077303 Cnksr1A2A9K7 700 aa8.23□□□□□ -1.09
Ptpra-202ENSMUST00000077303 Ccdc146E9Q9F7 977 aa8.23□□□□□ -1.09
Ptpra-202ENSMUST00000077303 Gnai2P08752 355 aaKnown RBP8.23□□□□□ -1.09
Ptpra-202ENSMUST00000077303 Atg4aQ8C9S8 396 aa8.23□□□□□ -1.09
Ptpra-202ENSMUST00000077303 Lrp6O88572 1613 aa8.23□□□□□ -1.09
Ptpra-202ENSMUST00000077303 TnrQ8BYI9 1358 aa8.23□□□□□ -1.09
Ptpra-202ENSMUST00000077303 Fmnl2A2APV2 1086 aa8.23□□□□□ -1.09
Ptpra-202ENSMUST00000077303 MsnP26041 577 aaKnown RBP8.23□□□□□ -1.09
Ptpra-202ENSMUST00000077303 Chpf2Q3UU43 768 aa8.23□□□□□ -1.09
Ptpra-202ENSMUST00000077303 Amotl2Q8K371 772 aa8.23□□□□□ -1.09
Ptpra-202ENSMUST00000077303 Kdm4cQ8VCD7 1054 aa8.23□□□□□ -1.09
Ptpra-202ENSMUST00000077303 Znf771Q8BJ90 317 aa8.23□□□□□ -1.09
Ptpra-202ENSMUST00000077303 Aox2Q5SGK3 1345 aa8.22□□□□□ -1.09
Ptpra-202ENSMUST00000077303 Hoxa7P02830 229 aa8.22□□□□□ -1.09
Ptpra-202ENSMUST00000077303 Ppp1r37Q8BKR5 712 aa8.22□□□□□ -1.09
Ptpra-202ENSMUST00000077303 Ppp6r3Q922D4 844 aa8.22□□□□□ -1.09
Ptpra-202ENSMUST00000077303 Cdhr2E9Q7P9 1308 aa8.22□□□□□ -1.09
Ptpra-202ENSMUST00000077303 CoilQ5SU73 570 aa8.22□□□□□ -1.09
Ptpra-202ENSMUST00000077303 Trim66Q924W6 1242 aa8.22□□□□□ -1.09
Ptpra-202ENSMUST00000077303 Simc1E9Q6E9 1354 aa8.22□□□□□ -1.09
Ptpra-202ENSMUST00000077303 Rnf123Q5XPI3 1314 aa8.22□□□□□ -1.09
Ptpra-202ENSMUST00000077303 Ubr2Q6WKZ8 1755 aa8.21□□□□□ -1.09
Ptpra-202ENSMUST00000077303 Eif4a1P60843 406 aaKnown RBP8.21□□□□□ -1.09
Ptpra-202ENSMUST00000077303 Nucb1Q02819 459 aaKnown RBP8.21□□□□□ -1.09
Ptpra-202ENSMUST00000077303 Ccdc129Q14B48 1034 aa8.21□□□□□ -1.09
Ptpra-202ENSMUST00000077303 Ddx46Q569Z5 1032 aaKnown RBP8.21□□□□□ -1.09
Ptpra-202ENSMUST00000077303 Smarca5Q91ZW3 1051 aaKnown RBP8.21□□□□□ -1.09
Ptpra-202ENSMUST00000077303 Cyp46a1Q9WVK8 500 aa8.21□□□□□ -1.09
Ptpra-202ENSMUST00000077303 Col1a2Q01149 1372 aa8.21□□□□□ -1.09
Ptpra-202ENSMUST00000077303 Mmp8O70138 465 aa8.21□□□□□ -1.1
Ptpra-202ENSMUST00000077303 Pdia3P27773 505 aaKnown RBP8.21□□□□□ -1.1
Ptpra-202ENSMUST00000077303 Atp8b2P98199 1209 aa8.21□□□□□ -1.1
Ptpra-202ENSMUST00000077303 Zbtb38Q3LR78 1197 aa8.21□□□□□ -1.1
Ptpra-202ENSMUST00000077303 1700010I14RikQ7TPG0 532 aa8.21□□□□□ -1.1
Ptpra-202ENSMUST00000077303 Elp1Q7TT37 1333 aaKnown RBP8.21□□□□□ -1.1
Ptpra-202ENSMUST00000077303 Fez2Q6TYB5 348 aa8.21□□□□□ -1.1
Ptpra-202ENSMUST00000077303 Fez1Q8K0X8 392 aa8.21□□□□□ -1.1
Ptpra-202ENSMUST00000077303 Tfip11Q9ERA6 838 aaKnown RBP8.21□□□□□ -1.1
Ptpra-202ENSMUST00000077303 Nphp1Q9QY53 687 aa8.21□□□□□ -1.1
Ptpra-202ENSMUST00000077303 Abca15E9PWH4 1668 aa8.2□□□□□ -1.1
Ptpra-202ENSMUST00000077303 AppP12023 770 aa8.2□□□□□ -1.1
Ptpra-202ENSMUST00000077303 Cyp2d11P24457 504 aa8.2□□□□□ -1.1
Ptpra-202ENSMUST00000077303 Slc7a3P70423 618 aa8.2□□□□□ -1.1
Ptpra-202ENSMUST00000077303 Ppip5k2Q6ZQB6 1129 aa8.2□□□□□ -1.1
Ptpra-202ENSMUST00000077303 Srgap3Q812A2 1099 aa8.2□□□□□ -1.1
Ptpra-202ENSMUST00000077303 EngaseQ8BX80 734 aa8.2□□□□□ -1.1
Ptpra-202ENSMUST00000077303 Ppp1r42Q8R1Z4 357 aa8.2□□□□□ -1.1
Ptpra-202ENSMUST00000077303 Noc3lQ8VI84 807 aaKnown RBP8.2□□□□□ -1.1
Ptpra-202ENSMUST00000077303 Lrrc59Q922Q8 307 aaKnown RBP8.2□□□□□ -1.1
Ptpra-202ENSMUST00000077303 Atg3Q9CPX6 314 aa8.2□□□□□ -1.1
Ptpra-202ENSMUST00000077303 Irx5Q9JKQ4 484 aa8.2□□□□□ -1.1
Ptpra-202ENSMUST00000077303 Fam50bQ9WTJ8 334 aa8.2□□□□□ -1.1
Ptpra-202ENSMUST00000077303 Irx2P81066 474 aa8.2□□□□□ -1.1
Ptpra-202ENSMUST00000077303 Rps6ka5Q8C050 863 aa8.2□□□□□ -1.1
Ptpra-202ENSMUST00000077303 Col15a1O35206 1367 aa8.19□□□□□ -1.1
Ptpra-202ENSMUST00000077303 Capn2O08529 700 aa8.19□□□□□ -1.1
Ptpra-202ENSMUST00000077303 Map2k1P31938 393 aa8.19□□□□□ -1.1
Ptpra-202ENSMUST00000077303 Zranb3Q6NZP1 1069 aa8.19□□□□□ -1.1
Ptpra-202ENSMUST00000077303 Cadps2Q8BYR5 1297 aa8.19□□□□□ -1.1
Ptpra-202ENSMUST00000077303 Atp10bB1AWN4 1474 aa8.19□□□□□ -1.1
Ptpra-202ENSMUST00000077303 HdgfP51859 237 aaKnown RBP8.19□□□□□ -1.1
Ptpra-202ENSMUST00000077303 Atp2b3Q0VF55 1220 aa8.19□□□□□ -1.1
Ptpra-202ENSMUST00000077303 Bcl9lQ67FY2 1494 aa8.19□□□□□ -1.1
Ptpra-202ENSMUST00000077303 Tjp1P39447 1745 aaKnown RBP8.19□□□□□ -1.1
Ptpra-202ENSMUST00000077303 GorabQ8BRM2 368 aa8.18□□□□□ -1.1
Ptpra-202ENSMUST00000077303 Emilin2Q8K482 1074 aa8.18□□□□□ -1.1
Ptpra-202ENSMUST00000077303 Nsfl1cQ9CZ44 370 aaKnown RBP8.18□□□□□ -1.1
Ptpra-202ENSMUST00000077303 Echdc1Q9D9V3 322 aa8.18□□□□□ -1.1
Ptpra-202ENSMUST00000077303 Gm10471E9Q1C7 252 aa8.18□□□□□ -1.1
Ptpra-202ENSMUST00000077303 Mcmdc2E9Q956 681 aa8.18□□□□□ -1.1
Ptpra-202ENSMUST00000077303 Zkscan2G3X952 960 aa8.18□□□□□ -1.1
Ptpra-202ENSMUST00000077303 Nkx2-3P97334 362 aa8.18□□□□□ -1.1
Ptpra-202ENSMUST00000077303 Btbd11Q6GQW0 1109 aa8.18□□□□□ -1.1
Ptpra-202ENSMUST00000077303 Slc20a2Q80UP8 656 aa8.18□□□□□ -1.1
Ptpra-202ENSMUST00000077303 Vps37dQ810I0 261 aa8.18□□□□□ -1.1
Ptpra-202ENSMUST00000077303 Nol11Q8BJW5 723 aaKnown RBP8.18□□□□□ -1.1
Ptpra-202ENSMUST00000077303 Tmem119Q8R138 280 aa8.18□□□□□ -1.1
Ptpra-202ENSMUST00000077303 Ddx60E9PZQ1 1711 aa8.17□□□□□ -1.1
Ptpra-202ENSMUST00000077303 Tns2Q8CGB6 1400 aa8.17□□□□□ -1.1
Ptpra-202ENSMUST00000077303 Prr29B1ARI9 187 aa8.17□□□□□ -1.1
Ptpra-202ENSMUST00000077303 Kank4Q6P9J5 1016 aa8.17□□□□□ -1.1
Ptpra-202ENSMUST00000077303 Bsdc1Q80Y55 427 aa8.17□□□□□ -1.1
Ptpra-202ENSMUST00000077303 Cc2d1aQ8K1A6 943 aa8.17□□□□□ -1.1
Ptpra-202ENSMUST00000077303 Flt4P35917 1363 aa8.17□□□□□ -1.1
Ptpra-202ENSMUST00000077303 Adcy9P51830 1353 aa8.17□□□□□ -1.1
Ptpra-202ENSMUST00000077303 Zfp142G5E869 1843 aa8.17□□□□□ -1.1
Ptpra-202ENSMUST00000077303 NmiO35309 314 aa8.17□□□□□ -1.1
Ptpra-202ENSMUST00000077303 Bend3Q6PAL0 825 aa8.17□□□□□ -1.1
Ptpra-202ENSMUST00000077303 Erc2Q6PH08 957 aa8.17□□□□□ -1.1
Ptpra-202ENSMUST00000077303 Sf3a1Q8K4Z5 791 aaKnown RBP8.17□□□□□ -1.1
Ptpra-202ENSMUST00000077303 Rgs17Q9QZB0 210 aa8.17□□□□□ -1.1
Ptpra-202ENSMUST00000077303 Bcar3Q9QZK2 820 aa8.17□□□□□ -1.1
Ptpra-202ENSMUST00000077303 Tnnt1O88346 262 aa8.16□□□□□ -1.1
Ptpra-202ENSMUST00000077303 Ddit3P35639 168 aa8.16□□□□□ -1.1
Ptpra-202ENSMUST00000077303 Dnajc2P54103 621 aaKnown RBP8.16□□□□□ -1.1
Ptpra-202ENSMUST00000077303 Cwc27Q3TKY6 469 aa8.16□□□□□ -1.1
Ptpra-202ENSMUST00000077303 RgmbQ7TQ33 436 aa8.16□□□□□ -1.1
Ptpra-202ENSMUST00000077303 Wdr78E9PYY5 807 aa8.16□□□□□ -1.1
Ptpra-202ENSMUST00000077303 Nol8Q3UHX0 1147 aaKnown RBP8.16□□□□□ -1.1
Retrieved 100 of 22,080 RNA–protein pairs in 19.4 ms