RNA–Protein interactions for RNA: ENSMUST00000052648.8

Ccdc28a-201, Transcript of Coiled-coil domain-containing 28A, mousemouse

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Gene Ccdc28a, Length 2,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-201ENSMUST00000052648 VirmaA2AIV2 1811 aaKnown RBP11.13□□□□□ -0.63
Ccdc28a-201ENSMUST00000052648 Jdp2P97875 163 aa11.12□□□□□ -0.63
Ccdc28a-201ENSMUST00000052648 Srp68Q8BMA6 625 aaKnown RBP11.12□□□□□ -0.63
Ccdc28a-201ENSMUST00000052648 NgdnQ9DB96 315 aaKnown RBP11.12□□□□□ -0.63
Ccdc28a-201ENSMUST00000052648 Stard3nlQ9DCI3 235 aa11.12□□□□□ -0.63
Ccdc28a-201ENSMUST00000052648 Kif23E9Q5G3 953 aa11.12□□□□□ -0.63
Ccdc28a-201ENSMUST00000052648 NmiO35309 314 aa11.12□□□□□ -0.63
Ccdc28a-201ENSMUST00000052648 Gnai2P08752 355 aaKnown RBP11.12□□□□□ -0.63
Ccdc28a-201ENSMUST00000052648 Ifit1bl2Q3U687 466 aa11.12□□□□□ -0.63
Ccdc28a-201ENSMUST00000052648 Sumf1Q8R0F3 372 aa11.12□□□□□ -0.63
Ccdc28a-201ENSMUST00000052648 Trim34aQ99PP6 485 aa11.12□□□□□ -0.63
Ccdc28a-201ENSMUST00000052648 Akt1s1Q9D1F4 257 aa11.12□□□□□ -0.63
Ccdc28a-201ENSMUST00000052648 Ezh2Q61188 746 aaKnown RBP11.11□□□□□ -0.63
Ccdc28a-201ENSMUST00000052648 Mum1Q6DID5 682 aa11.11□□□□□ -0.63
Ccdc28a-201ENSMUST00000052648 Ubn2Q80WC1 1314 aa11.11□□□□□ -0.63
Ccdc28a-201ENSMUST00000052648 Triml2E9PW10 424 aa11.11□□□□□ -0.63
Ccdc28a-201ENSMUST00000052648 Fam213aQ9CYH2 218 aa11.11□□□□□ -0.63
Ccdc28a-201ENSMUST00000052648 Tm6sf1P58749 370 aa11.1□□□□□ -0.63
Ccdc28a-201ENSMUST00000052648 Duox1A2AQ92 1551 aa11.09□□□□□ -0.63
Ccdc28a-201ENSMUST00000052648 Cyp2c23E9Q5K4 494 aa11.09□□□□□ -0.63
Ccdc28a-201ENSMUST00000052648 Rbm26Q6NZN0 1012 aaKnown RBP11.09□□□□□ -0.63
Ccdc28a-201ENSMUST00000052648 Mapk8ip1Q9WVI9 707 aa11.09□□□□□ -0.63
Ccdc28a-201ENSMUST00000052648 Togaram1Q6A070 1776 aaKnown RBP11.09□□□□□ -0.63
Ccdc28a-201ENSMUST00000052648 Cyp19a1P28649 503 aa11.09□□□□□ -0.63
Ccdc28a-201ENSMUST00000052648 Tlr7P58681 1050 aa11.09□□□□□ -0.63
Ccdc28a-201ENSMUST00000052648 Rtkn2Q14B46 604 aa11.09□□□□□ -0.63
Ccdc28a-201ENSMUST00000052648 Tceal9Q9DD24 104 aa11.09□□□□□ -0.63
Ccdc28a-201ENSMUST00000052648 Kif13bA0A286YCV9 1847 aa11.08□□□□□ -0.63
Ccdc28a-201ENSMUST00000052648 Sned1Q70E20 1403 aa11.08□□□□□ -0.64
Ccdc28a-201ENSMUST00000052648 Dctn1O08788 1281 aa11.08□□□□□ -0.64
Ccdc28a-201ENSMUST00000052648 Npy5rO70342 466 aa11.08□□□□□ -0.64
Ccdc28a-201ENSMUST00000052648 Tlr8P58682 1032 aa11.08□□□□□ -0.64
Ccdc28a-201ENSMUST00000052648 Gnat3Q3V3I2 354 aa11.08□□□□□ -0.64
Ccdc28a-201ENSMUST00000052648 Zc3h12cQ5DTV4 884 aa11.08□□□□□ -0.64
Ccdc28a-201ENSMUST00000052648 Msl1Q6PDM1 616 aa11.08□□□□□ -0.64
Ccdc28a-201ENSMUST00000052648 Tktl2Q9D4D4 627 aa11.08□□□□□ -0.64
Ccdc28a-201ENSMUST00000052648 Gimap8Q75N62 688 aa11.07□□□□□ -0.64
Ccdc28a-201ENSMUST00000052648 Susd4Q8BH32 490 aa11.07□□□□□ -0.64
Ccdc28a-201ENSMUST00000052648 Rlbp1Q9Z275 317 aa11.07□□□□□ -0.64
Ccdc28a-201ENSMUST00000052648 Stox1B2RQL2 990 aa11.07□□□□□ -0.64
Ccdc28a-201ENSMUST00000052648 Ccdc85cE9Q6B2 420 aa11.07□□□□□ -0.64
Ccdc28a-201ENSMUST00000052648 CltaO08585 235 aa11.07□□□□□ -0.64
Ccdc28a-201ENSMUST00000052648 Hsp90ab1P11499 724 aaKnown RBP11.07□□□□□ -0.64
Ccdc28a-201ENSMUST00000052648 Nlrp9bQ66X22 1003 aa11.07□□□□□ -0.64
Ccdc28a-201ENSMUST00000052648 Clca2Q8BG22 942 aa11.07□□□□□ -0.64
Ccdc28a-201ENSMUST00000052648 HnrnpuQ8VEK3 800 aaKnown RBP11.07□□□□□ -0.64
Ccdc28a-201ENSMUST00000052648 Foxo4Q9WVH3 505 aa11.07□□□□□ -0.64
Ccdc28a-201ENSMUST00000052648 Ttc19Q8CC21 365 aa11.06□□□□□ -0.64
Ccdc28a-201ENSMUST00000052648 GptQ8QZR5 496 aa11.06□□□□□ -0.64
Ccdc28a-201ENSMUST00000052648 CpzQ8R4V4 654 aa11.06□□□□□ -0.64
Ccdc28a-201ENSMUST00000052648 Sart3Q9JLI8 962 aaKnown RBP11.06□□□□□ -0.64
Ccdc28a-201ENSMUST00000052648 StrcQ8VIM6 1809 aa11.06□□□□□ -0.64
Ccdc28a-201ENSMUST00000052648 InsrrQ9WTL4 1300 aa11.06□□□□□ -0.64
Ccdc28a-201ENSMUST00000052648 ScaperF8VQ70 1398 aaKnown RBP11.06□□□□□ -0.64
Ccdc28a-201ENSMUST00000052648 Pde4bB1AWC9 736 aa11.06□□□□□ -0.64
Ccdc28a-201ENSMUST00000052648 Cops6O88545 324 aa11.06□□□□□ -0.64
Ccdc28a-201ENSMUST00000052648 Ier5O89113 308 aa11.06□□□□□ -0.64
Ccdc28a-201ENSMUST00000052648 Plcb3P51432 1234 aaKnown RBP11.06□□□□□ -0.64
Ccdc28a-201ENSMUST00000052648 Atp8b2P98199 1209 aa11.06□□□□□ -0.64
Ccdc28a-201ENSMUST00000052648 Smc4Q8CG47 1286 aa11.06□□□□□ -0.64
Ccdc28a-201ENSMUST00000052648 CanxP35564 591 aaKnown RBP11.05□□□□□ -0.64
Ccdc28a-201ENSMUST00000052648 Cwc27Q3TKY6 469 aa11.05□□□□□ -0.64
Ccdc28a-201ENSMUST00000052648 Igflr1Q3U4N7 345 aa11.05□□□□□ -0.64
Ccdc28a-201ENSMUST00000052648 GpkowQ56A08 488 aa11.05□□□□□ -0.64
Ccdc28a-201ENSMUST00000052648 Tgfb1i1Q62219 461 aa11.05□□□□□ -0.64
Ccdc28a-201ENSMUST00000052648 NexnQ7TPW1 607 aa11.05□□□□□ -0.64
Ccdc28a-201ENSMUST00000052648 Srgap3Q812A2 1099 aa11.05□□□□□ -0.64
Ccdc28a-201ENSMUST00000052648 Fam13aQ8BGI4 693 aa11.05□□□□□ -0.64
Ccdc28a-201ENSMUST00000052648 Ppp1r42Q8R1Z4 357 aa11.05□□□□□ -0.64
Ccdc28a-201ENSMUST00000052648 Arid3aQ62431 601 aa11.05□□□□□ -0.64
Ccdc28a-201ENSMUST00000052648 Cluap1Q8R3P7 413 aa11.05□□□□□ -0.64
Ccdc28a-201ENSMUST00000052648 AU019823E9PUQ3 292 aa11.04□□□□□ -0.64
Ccdc28a-201ENSMUST00000052648 1810065E05RikQ5NC41 235 aa11.04□□□□□ -0.64
Ccdc28a-201ENSMUST00000052648 Trim27Q62158 513 aa11.04□□□□□ -0.64
Ccdc28a-201ENSMUST00000052648 Eif4g2Q62448 906 aaKnown RBP11.04□□□□□ -0.64
Ccdc28a-201ENSMUST00000052648 Col23a1Q8K4G2 532 aa11.04□□□□□ -0.64
Ccdc28a-201ENSMUST00000052648 Chrna2Q91X60 512 aa11.04□□□□□ -0.64
Ccdc28a-201ENSMUST00000052648 Hs1bp3Q3TC93 395 aa11.04□□□□□ -0.64
Ccdc28a-201ENSMUST00000052648 Cyp7a1Q64505 503 aa11.04□□□□□ -0.64
Ccdc28a-201ENSMUST00000052648 Foxo3Q9WVH4 672 aa11.04□□□□□ -0.64
Ccdc28a-201ENSMUST00000052648 AtrnQ9WU60 1428 aa11.03□□□□□ -0.64
Ccdc28a-201ENSMUST00000052648 Zswim8Q3UHH1 1832 aaKnown RBP11.03□□□□□ -0.64
Ccdc28a-201ENSMUST00000052648 Zbtb38Q3LR78 1197 aa11.03□□□□□ -0.64
Ccdc28a-201ENSMUST00000052648 BcanQ61361 883 aa11.03□□□□□ -0.64
Ccdc28a-201ENSMUST00000052648 ErfeQ6PGN1 340 aa11.03□□□□□ -0.64
Ccdc28a-201ENSMUST00000052648 Ttc14Q9CSP9 761 aa11.03□□□□□ -0.64
Ccdc28a-201ENSMUST00000052648 IncenpQ9WU62 880 aa11.03□□□□□ -0.64
Ccdc28a-201ENSMUST00000052648 Trim34bJ3QNR8 485 aa11.02□□□□□ -0.64
Ccdc28a-201ENSMUST00000052648 VgfQ0VGU4 617 aa11.02□□□□□ -0.64
Ccdc28a-201ENSMUST00000052648 Slc4a10Q5DTL9 1118 aa11.02□□□□□ -0.64
Ccdc28a-201ENSMUST00000052648 Nol10Q5RJG1 687 aaKnown RBP11.02□□□□□ -0.64
Ccdc28a-201ENSMUST00000052648 Dbndd1Q9CZ00 160 aa11.02□□□□□ -0.64
Ccdc28a-201ENSMUST00000052648 Mybbp1aQ7TPV4 1344 aaKnown RBP11.02□□□□□ -0.64
Ccdc28a-201ENSMUST00000052648 Prdm11A2AGX3 565 aa11.02□□□□□ -0.65
Ccdc28a-201ENSMUST00000052648 Adora1Q60612 326 aa11.02□□□□□ -0.65
Ccdc28a-201ENSMUST00000052648 Armcx1Q9CX83 456 aa11.02□□□□□ -0.65
Ccdc28a-201ENSMUST00000052648 Trpc5Q9QX29 975 aa11.02□□□□□ -0.65
Ccdc28a-201ENSMUST00000052648 Cfap44E9Q5M6 1843 aa11.01□□□□□ -0.65
Ccdc28a-201ENSMUST00000052648 Prl3d2F6R3P9 224 aa11.01□□□□□ -0.65
Ccdc28a-201ENSMUST00000052648 Mmp8O70138 465 aa11.01□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 8.9 ms