RNA–Protein interactions for RNA: ENSMUST00000007584.3

Pcdhac1-201, Transcript of Protocadherin alpha C1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdhac1, Length 5,419 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1-201ENSMUST00000007584 Prl7d1P04769 244 aa14□□□□□ -0.17
Pcdhac1-201ENSMUST00000007584 Tubb5P99024 444 aaKnown RBP14□□□□□ -0.17
Pcdhac1-201ENSMUST00000007584 Cep55Q8BT07 462 aa14□□□□□ -0.17
Pcdhac1-201ENSMUST00000007584 Zfp42P22227 288 aa14□□□□□ -0.17
Pcdhac1-201ENSMUST00000007584 Nkx1-2P42580 305 aa14□□□□□ -0.17
Pcdhac1-201ENSMUST00000007584 Ccdc172Q810N9 267 aa14□□□□□ -0.17
Pcdhac1-201ENSMUST00000007584 Slc26a8Q8R0C3 999 aa14□□□□□ -0.17
Pcdhac1-201ENSMUST00000007584 Stard3nlQ9DCI3 235 aa14□□□□□ -0.17
Pcdhac1-201ENSMUST00000007584 Cnnm1Q0GA42 951 aa14□□□□□ -0.17
Pcdhac1-201ENSMUST00000007584 Bank1Q80VH0 783 aa14□□□□□ -0.17
Pcdhac1-201ENSMUST00000007584 Srgap1Q91Z69 1062 aa14□□□□□ -0.17
Pcdhac1-201ENSMUST00000007584 LlphQ9D945 130 aaKnown RBP14□□□□□ -0.17
Pcdhac1-201ENSMUST00000007584 Carmil1Q6EDY6 1374 aa13.99□□□□□ -0.17
Pcdhac1-201ENSMUST00000007584 Gm28919A0A087WP35 240 aa13.99□□□□□ -0.17
Pcdhac1-201ENSMUST00000007584 Proca1B0QZF7 307 aa13.99□□□□□ -0.17
Pcdhac1-201ENSMUST00000007584 Speer4aF8VPX6 267 aa13.99□□□□□ -0.17
Pcdhac1-201ENSMUST00000007584 AknaQ80VW7 1404 aa13.99□□□□□ -0.17
Pcdhac1-201ENSMUST00000007584 Aimp1P31230 310 aaKnown RBP13.99□□□□□ -0.17
Pcdhac1-201ENSMUST00000007584 Prkar2bP31324 416 aa13.99□□□□□ -0.17
Pcdhac1-201ENSMUST00000007584 Apbb1ipQ8R5A3 670 aa13.99□□□□□ -0.17
Pcdhac1-201ENSMUST00000007584 Gm10093D3YYI8 482 aa13.99□□□□□ -0.17
Pcdhac1-201ENSMUST00000007584 Hdac1O09106 482 aaKnown RBP13.99□□□□□ -0.17
Pcdhac1-201ENSMUST00000007584 Camk4P08414 469 aa13.99□□□□□ -0.17
Pcdhac1-201ENSMUST00000007584 Ppp1r42Q8R1Z4 357 aa13.99□□□□□ -0.17
Pcdhac1-201ENSMUST00000007584 ClgnP52194 611 aa13.98□□□□□ -0.17
Pcdhac1-201ENSMUST00000007584 Cct4P80315 539 aaKnown RBP13.98□□□□□ -0.17
Pcdhac1-201ENSMUST00000007584 Calml4Q91WQ9 153 aa13.98□□□□□ -0.17
Pcdhac1-201ENSMUST00000007584 Gnl3lQ6PGG6 577 aaKnown RBP13.98□□□□□ -0.17
Pcdhac1-201ENSMUST00000007584 Cdca8Q8BHX3 289 aa13.98□□□□□ -0.17
Pcdhac1-201ENSMUST00000007584 Atp2b1G5E829 1220 aa13.98□□□□□ -0.17
Pcdhac1-201ENSMUST00000007584 Vps8Q0P5W1 1427 aa13.98□□□□□ -0.17
Pcdhac1-201ENSMUST00000007584 Samd15F6XZJ7 620 aa13.98□□□□□ -0.17
Pcdhac1-201ENSMUST00000007584 Dapk3O54784 448 aa13.97□□□□□ -0.17
Pcdhac1-201ENSMUST00000007584 Anp32cQ64G17 123 aa13.97□□□□□ -0.17
Pcdhac1-201ENSMUST00000007584 Rassf10Q8BL43 508 aa13.97□□□□□ -0.17
Pcdhac1-201ENSMUST00000007584 Adcy3Q8VHH7 1145 aa13.97□□□□□ -0.17
Pcdhac1-201ENSMUST00000007584 Dhx30Q99PU8 1217 aaKnown RBP13.97□□□□□ -0.17
Pcdhac1-201ENSMUST00000007584 Uso1Q9Z1Z0 959 aaKnown RBP13.97□□□□□ -0.17
Pcdhac1-201ENSMUST00000007584 Ces1hD3Z298 562 aa13.97□□□□□ -0.17
Pcdhac1-201ENSMUST00000007584 Eif2aQ8BJW6 581 aaKnown RBP13.97□□□□□ -0.17
Pcdhac1-201ENSMUST00000007584 Larp6Q8BN59 492 aa13.97□□□□□ -0.17
Pcdhac1-201ENSMUST00000007584 Elf2Q9JHC9 593 aa13.97□□□□□ -0.17
Pcdhac1-201ENSMUST00000007584 Phldb1Q6PDH0 1371 aaKnown RBP13.97□□□□□ -0.17
Pcdhac1-201ENSMUST00000007584 ErbinQ80TH2 1402 aa13.97□□□□□ -0.17
Pcdhac1-201ENSMUST00000007584 Gm44503E9PYU5 387 aa13.97□□□□□ -0.17
Pcdhac1-201ENSMUST00000007584 Ccdc14Q8K2J4 934 aa13.97□□□□□ -0.17
Pcdhac1-201ENSMUST00000007584 Galntl5Q9D4M9 431 aa13.97□□□□□ -0.17
Pcdhac1-201ENSMUST00000007584 Ctnna2Q61301 953 aa13.97□□□□□ -0.17
Pcdhac1-201ENSMUST00000007584 Spa17Q62252 149 aa13.97□□□□□ -0.17
Pcdhac1-201ENSMUST00000007584 4921530L21RikQ9CQ47 274 aa13.97□□□□□ -0.17
Pcdhac1-201ENSMUST00000007584 Exoc3l2D3YUP5 789 aa13.97□□□□□ -0.17
Pcdhac1-201ENSMUST00000007584 Mrpl44Q9CY73 333 aaKnown RBP13.97□□□□□ -0.17
Pcdhac1-201ENSMUST00000007584 Mxra7Q9CZH7 178 aa13.97□□□□□ -0.17
Pcdhac1-201ENSMUST00000007584 Setdb1O88974 1307 aa13.97□□□□□ -0.17
Pcdhac1-201ENSMUST00000007584 Kank1E9Q238 1360 aa13.97□□□□□ -0.17
Pcdhac1-201ENSMUST00000007584 Psmb7P70195 277 aa13.96□□□□□ -0.17
Pcdhac1-201ENSMUST00000007584 Cct5P80316 541 aaKnown RBP13.96□□□□□ -0.17
Pcdhac1-201ENSMUST00000007584 Tshz2Q68FE9 1030 aa13.96□□□□□ -0.17
Pcdhac1-201ENSMUST00000007584 Ddx10Q80Y44 875 aaKnown RBP13.96□□□□□ -0.17
Pcdhac1-201ENSMUST00000007584 Ppp1r18Q8BQ30 594 aa13.96□□□□□ -0.17
Pcdhac1-201ENSMUST00000007584 Stmn4P63042 189 aa13.96□□□□□ -0.17
Pcdhac1-201ENSMUST00000007584 Sec62Q8BU14 398 aaKnown RBP13.96□□□□□ -0.17
Pcdhac1-201ENSMUST00000007584 Rad23bP54728 416 aa13.96□□□□□ -0.17
Pcdhac1-201ENSMUST00000007584 Ift88Q61371 824 aa13.96□□□□□ -0.17
Pcdhac1-201ENSMUST00000007584 Plekhm2Q80TQ5 1018 aa13.96□□□□□ -0.17
Pcdhac1-201ENSMUST00000007584 Krt8P11679 490 aaKnown RBP13.96□□□□□ -0.18
Pcdhac1-201ENSMUST00000007584 Dact3Q0PHV7 610 aa13.96□□□□□ -0.18
Pcdhac1-201ENSMUST00000007584 TefQ9JLC6 301 aa13.96□□□□□ -0.18
Pcdhac1-201ENSMUST00000007584 Stmn2P55821 179 aa13.95□□□□□ -0.18
Pcdhac1-201ENSMUST00000007584 Suds3Q8BR65 328 aa13.95□□□□□ -0.18
Pcdhac1-201ENSMUST00000007584 Tmem67Q8BR76 992 aa13.95□□□□□ -0.18
Pcdhac1-201ENSMUST00000007584 Tacc3Q9JJ11 631 aa13.95□□□□□ -0.18
Pcdhac1-201ENSMUST00000007584 Tnni2P13412 182 aa13.95□□□□□ -0.18
Pcdhac1-201ENSMUST00000007584 Mtx1P47802 317 aa13.95□□□□□ -0.18
Pcdhac1-201ENSMUST00000007584 Ccdc162pQ0VG85 912 aa13.95□□□□□ -0.18
Pcdhac1-201ENSMUST00000007584 Zfyve27Q3TXX3 415 aa13.95□□□□□ -0.18
Pcdhac1-201ENSMUST00000007584 Mybpc2Q5XKE0 1136 aa13.95□□□□□ -0.18
Pcdhac1-201ENSMUST00000007584 SfpqQ8VIJ6 699 aaKnown RBP13.95□□□□□ -0.18
Pcdhac1-201ENSMUST00000007584 Vps16Q920Q4 839 aa13.95□□□□□ -0.18
Pcdhac1-201ENSMUST00000007584 Ublcp1Q8BGR9 318 aa13.95□□□□□ -0.18
Pcdhac1-201ENSMUST00000007584 Bicd1Q8BR07 835 aa13.95□□□□□ -0.18
Pcdhac1-201ENSMUST00000007584 AmfrQ9R049 643 aa13.95□□□□□ -0.18
Pcdhac1-201ENSMUST00000007584 Cbfa2t2O70374 594 aa13.95□□□□□ -0.18
Pcdhac1-201ENSMUST00000007584 Morc4Q8BMD7 928 aa13.95□□□□□ -0.18
Pcdhac1-201ENSMUST00000007584 Cacna2d3Q9Z1L5 1091 aa13.95□□□□□ -0.18
Pcdhac1-201ENSMUST00000007584 Gbp8Q2V6D6 525 aa13.94□□□□□ -0.18
Pcdhac1-201ENSMUST00000007584 Ubxn1Q922Y1 297 aa13.94□□□□□ -0.18
Pcdhac1-201ENSMUST00000007584 PalmQ9Z0P4 383 aa13.94□□□□□ -0.18
Pcdhac1-201ENSMUST00000007584 Nek5Q7TSC3 627 aa13.94□□□□□ -0.18
Pcdhac1-201ENSMUST00000007584 Tsr2Q8C8T8 191 aa13.94□□□□□ -0.18
Pcdhac1-201ENSMUST00000007584 Cib2Q9Z309 187 aa13.94□□□□□ -0.18
Pcdhac1-201ENSMUST00000007584 Ccdc25Q78PG9 208 aa13.94□□□□□ -0.18
Pcdhac1-201ENSMUST00000007584 Egfl6Q9JJZ5 550 aa13.94□□□□□ -0.18
Pcdhac1-201ENSMUST00000007584 Tnnc1P19123 161 aa13.94□□□□□ -0.18
Pcdhac1-201ENSMUST00000007584 Krt77Q6IFZ6 572 aa13.94□□□□□ -0.18
Pcdhac1-201ENSMUST00000007584 Spats2Q8K1N4 545 aaKnown RBP13.94□□□□□ -0.18
Pcdhac1-201ENSMUST00000007584 Stat1P42225 749 aa13.93□□□□□ -0.18
Pcdhac1-201ENSMUST00000007584 Mctp2Q5RJH2 878 aa13.93□□□□□ -0.18
Pcdhac1-201ENSMUST00000007584 Gdpd2Q9ESM6 539 aa13.93□□□□□ -0.18
Pcdhac1-201ENSMUST00000007584 Cnpy2Q9QXT0 182 aa13.93□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 44.6 ms