RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 A0A1W2PQ72 361 aa13.95□□□□□ -0.18
PTPN9-201ENST00000306726 PRR35P0CG20 571 aa13.95□□□□□ -0.18
PTPN9-201ENST00000306726 WASP42768 502 aa13.95□□□□□ -0.18
PTPN9-201ENST00000306726 SHHQ15465 462 aa13.95□□□□□ -0.18
PTPN9-201ENST00000306726 SLC35F1Q5T1Q4 408 aa13.95□□□□□ -0.18
PTPN9-201ENST00000306726 ZSWIM9Q86XI8 627 aa13.95□□□□□ -0.18
PTPN9-201ENST00000306726 ALDH16A1Q8IZ83 802 aa13.95□□□□□ -0.18
PTPN9-201ENST00000306726 TDHQ8IZJ6 230 aa13.95□□□□□ -0.18
PTPN9-201ENST00000306726 ISG20Q96AZ6 181 aaKnown RBP13.95□□□□□ -0.18
PTPN9-201ENST00000306726 RNF31Q96EP0 1072 aa13.95□□□□□ -0.18
PTPN9-201ENST00000306726 KCNE2Q9Y6J6 123 aa13.95□□□□□ -0.18
PTPN9-201ENST00000306726 A0A1W2PQL4 384 aaPredicted RBP13.95□□□□□ -0.18
PTPN9-201ENST00000306726 OR2A25A4D2G3 310 aa13.95□□□□□ -0.18
PTPN9-201ENST00000306726 LINC01553A4QN01 128 aa13.95□□□□□ -0.18
PTPN9-201ENST00000306726 M0R3H8 397 aa13.95□□□□□ -0.18
PTPN9-201ENST00000306726 WNT9AO14904 365 aa13.95□□□□□ -0.18
PTPN9-201ENST00000306726 GASTP01350 101 aa13.95□□□□□ -0.18
PTPN9-201ENST00000306726 IFNW1P05000 195 aa13.95□□□□□ -0.18
PTPN9-201ENST00000306726 NCF4Q15080 339 aa13.95□□□□□ -0.18
PTPN9-201ENST00000306726 SLC5A12Q1EHB4 618 aa13.95□□□□□ -0.18
PTPN9-201ENST00000306726 NCEH1Q6PIU2 408 aa13.95□□□□□ -0.18
PTPN9-201ENST00000306726 OR5D16Q8NGK9 328 aa13.95□□□□□ -0.18
PTPN9-201ENST00000306726 JPH3Q8WXH2 748 aaPredicted RBP13.95□□□□□ -0.18
PTPN9-201ENST00000306726 ZFP3Q96NJ6 502 aa13.95□□□□□ -0.18
PTPN9-201ENST00000306726 POPDC3Q9HBV1 291 aa13.95□□□□□ -0.18
PTPN9-201ENST00000306726 SERHLQ9NQF3 203 aa13.95□□□□□ -0.18
PTPN9-201ENST00000306726 MRPL15Q9P015 296 aaKnown RBP13.95□□□□□ -0.18
PTPN9-201ENST00000306726 RTTNQ86VV8 2226 aa13.94□□□□□ -0.18
PTPN9-201ENST00000306726 PRAMEF33A0A0G2JMD5 474 aa13.94□□□□□ -0.18
PTPN9-201ENST00000306726 FEZF1A0PJY2 475 aa13.94□□□□□ -0.18
PTPN9-201ENST00000306726 GNB5O14775 395 aa13.94□□□□□ -0.18
PTPN9-201ENST00000306726 AKR7A2O43488 359 aa13.94□□□□□ -0.18
PTPN9-201ENST00000306726 PRAMEF10O60809 474 aa13.94□□□□□ -0.18
PTPN9-201ENST00000306726 HOXD11P31277 338 aaPredicted RBP13.94□□□□□ -0.18
PTPN9-201ENST00000306726 DUSP7Q16829 419 aa13.94□□□□□ -0.18
PTPN9-201ENST00000306726 PROX2Q3B8N5 592 aa13.94□□□□□ -0.18
PTPN9-201ENST00000306726 AFMIDQ63HM1 303 aa13.94□□□□□ -0.18
PTPN9-201ENST00000306726 CRTC1Q6UUV9 634 aa13.94□□□□□ -0.18
PTPN9-201ENST00000306726 LYPD8Q6UX82 237 aa13.94□□□□□ -0.18
PTPN9-201ENST00000306726 ING5Q8WYH8 240 aa13.94□□□□□ -0.18
PTPN9-201ENST00000306726 GAL3ST1Q99999 423 aa13.94□□□□□ -0.18
PTPN9-201ENST00000306726 ZBP1Q9H171 429 aa13.94□□□□□ -0.18
PTPN9-201ENST00000306726 ABCG4Q9H172 646 aa13.94□□□□□ -0.18
PTPN9-201ENST00000306726 TRIM45Q9H8W5 580 aaPredicted RBP13.94□□□□□ -0.18
PTPN9-201ENST00000306726 BRWD1Q9NSI6 2320 aa13.94□□□□□ -0.18
PTPN9-201ENST00000306726 LOC102723532A0A0G2JNH3 316 aa13.94□□□□□ -0.18
PTPN9-201ENST00000306726 FADS2P1A8MWK0 482 aa13.94□□□□□ -0.18
PTPN9-201ENST00000306726 RETP07949 1114 aa13.94□□□□□ -0.18
PTPN9-201ENST00000306726 MYL12AP19105 171 aa13.94□□□□□ -0.18
PTPN9-201ENST00000306726 APEX1P27695 318 aaKnown RBP13.94□□□□□ -0.18
PTPN9-201ENST00000306726 CTSCP53634 463 aa13.94□□□□□ -0.18
PTPN9-201ENST00000306726 ZNF557Q8N988 423 aaPredicted RBP13.94□□□□□ -0.18
PTPN9-201ENST00000306726 GANCQ8TET4 914 aa13.94□□□□□ -0.18
PTPN9-201ENST00000306726 PKMYT1Q99640 499 aa13.94□□□□□ -0.18
PTPN9-201ENST00000306726 DUSP21Q9H596 190 aa13.94□□□□□ -0.18
PTPN9-201ENST00000306726 PTPRSQ13332 1948 aa13.94□□□□□ -0.18
PTPN9-201ENST00000306726 TRBV4-1A0A0J9YWV2 114 aa13.94□□□□□ -0.18
PTPN9-201ENST00000306726 METTL15A6NJ78 407 aa13.94□□□□□ -0.18
PTPN9-201ENST00000306726 CD8B2A6NJW9 211 aa13.94□□□□□ -0.18
PTPN9-201ENST00000306726 TLR4O00206 839 aa13.94□□□□□ -0.18
PTPN9-201ENST00000306726 DSCR3O14972 297 aa13.94□□□□□ -0.18
PTPN9-201ENST00000306726 SEMA3DO95025 777 aa13.94□□□□□ -0.18
PTPN9-201ENST00000306726 ADH1AP07327 375 aa13.94□□□□□ -0.18
PTPN9-201ENST00000306726 CD8BP10966 210 aa13.94□□□□□ -0.18
PTPN9-201ENST00000306726 AMD1P17707 334 aa13.94□□□□□ -0.18
PTPN9-201ENST00000306726 SDC2P34741 201 aa13.94□□□□□ -0.18
PTPN9-201ENST00000306726 GABARAPL2P60520 117 aa13.94□□□□□ -0.18
PTPN9-201ENST00000306726 CSTF1Q05048 431 aaKnown RBP13.94□□□□□ -0.18
PTPN9-201ENST00000306726 RGNQ15493 299 aa13.94□□□□□ -0.18
PTPN9-201ENST00000306726 GPAT3Q53EU6 434 aa13.94□□□□□ -0.18
PTPN9-201ENST00000306726 KDM4DQ6B0I6 523 aa13.94□□□□□ -0.18
PTPN9-201ENST00000306726 ATP6V1C2Q8NEY4 427 aa13.94□□□□□ -0.18
PTPN9-201ENST00000306726 SMG7Q92540 1137 aaKnown RBP13.94□□□□□ -0.18
PTPN9-201ENST00000306726 CHIAQ9BZP6 476 aa13.94□□□□□ -0.18
PTPN9-201ENST00000306726 OR2AG1Q9H205 316 aa13.94□□□□□ -0.18
PTPN9-201ENST00000306726 RHBGQ9H310 441 aa13.94□□□□□ -0.18
PTPN9-201ENST00000306726 SMURF1Q9HCE7 757 aa13.94□□□□□ -0.18
PTPN9-201ENST00000306726 MAT2BQ9NZL9 334 aa13.94□□□□□ -0.18
PTPN9-201ENST00000306726 DNMT3BQ9UBC3 853 aaKnown RBP13.94□□□□□ -0.18
PTPN9-201ENST00000306726 DYRK1BQ9Y463 629 aa13.94□□□□□ -0.18
PTPN9-201ENST00000306726 A0A1W2PRB8 838 aa13.93□□□□□ -0.18
PTPN9-201ENST00000306726 HNRNPCL2B2RXH8 293 aa13.93□□□□□ -0.18
PTPN9-201ENST00000306726 PRAMEF4O60810 478 aa13.93□□□□□ -0.18
PTPN9-201ENST00000306726 PRKRAO75569 313 aaKnown RBP13.93□□□□□ -0.18
PTPN9-201ENST00000306726 CATP04040 527 aaKnown RBP13.93□□□□□ -0.18
PTPN9-201ENST00000306726 CYP17A1P05093 508 aa13.93□□□□□ -0.18
PTPN9-201ENST00000306726 CELP19835 753 aa13.93□□□□□ -0.18
PTPN9-201ENST00000306726 RYKP34925 604 aa13.93□□□□□ -0.18
PTPN9-201ENST00000306726 SUOXP51687 545 aa13.93□□□□□ -0.18
PTPN9-201ENST00000306726 UGT2B15P54855 530 aa13.93□□□□□ -0.18
PTPN9-201ENST00000306726 CSNK2BP67870 215 aa13.93□□□□□ -0.18
PTPN9-201ENST00000306726 GRIK2Q13002 908 aa13.93□□□□□ -0.18
PTPN9-201ENST00000306726 RAB33AQ14088 237 aa13.93□□□□□ -0.18
PTPN9-201ENST00000306726 LRRC32Q14392 662 aa13.93□□□□□ -0.18
PTPN9-201ENST00000306726 SYT6Q5T7P8 510 aaPredicted RBP13.93□□□□□ -0.18
PTPN9-201ENST00000306726 PRAMEF9Q5VWM5 478 aa13.93□□□□□ -0.18
PTPN9-201ENST00000306726 ZNF544Q6NX49 715 aa13.93□□□□□ -0.18
PTPN9-201ENST00000306726 VN1R5Q7Z5H4 357 aa13.93□□□□□ -0.18
PTPN9-201ENST00000306726 CHPFQ8IZ52 775 aa13.93□□□□□ -0.18
PTPN9-201ENST00000306726 BEST4Q8NFU0 473 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms