RNA–Protein interactions for RNA: ENST00000450649.6

SCUBE2-202, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene SCUBE2, Length 2,912 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-202ENST00000450649 CLDN20P56880 219 aa16.44■□□□□ 0.22
SCUBE2-202ENST00000450649 CERS6Q6ZMG9 384 aa16.44■□□□□ 0.22
SCUBE2-202ENST00000450649 DDX53Q86TM3 631 aaKnown RBP16.44■□□□□ 0.22
SCUBE2-202ENST00000450649 TRPV1Q8NER1 839 aa16.44■□□□□ 0.22
SCUBE2-202ENST00000450649 HYLS1Q96M11 299 aa16.44■□□□□ 0.22
SCUBE2-202ENST00000450649 TCF25Q9BQ70 676 aa16.44■□□□□ 0.22
SCUBE2-202ENST00000450649 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.44■□□□□ 0.22
SCUBE2-202ENST00000450649 PAK6Q9NQU5 681 aaPredicted RBP16.44■□□□□ 0.22
SCUBE2-202ENST00000450649 ACER3Q9NUN7 267 aa16.44■□□□□ 0.22
SCUBE2-202ENST00000450649 PRG3Q9Y2Y8 225 aaPredicted RBP16.44■□□□□ 0.22
SCUBE2-202ENST00000450649 SNX11Q9Y5W9 270 aa16.44■□□□□ 0.22
SCUBE2-202ENST00000450649 ALPK3Q96L96 1907 aa16.43■□□□□ 0.22
SCUBE2-202ENST00000450649 SYN3O14994 580 aa16.43■□□□□ 0.22
SCUBE2-202ENST00000450649 HCN1O60741 890 aa16.43■□□□□ 0.22
SCUBE2-202ENST00000450649 SLC22A5O76082 557 aa16.43■□□□□ 0.22
SCUBE2-202ENST00000450649 GASTP01350 101 aa16.43■□□□□ 0.22
SCUBE2-202ENST00000450649 BOP1Q14137 746 aaKnown RBP16.43■□□□□ 0.22
SCUBE2-202ENST00000450649 TEAD4Q15561 434 aa16.43■□□□□ 0.22
SCUBE2-202ENST00000450649 GPR65Q8IYL9 337 aa16.43■□□□□ 0.22
SCUBE2-202ENST00000450649 Q8N402 240 aa16.43■□□□□ 0.22
SCUBE2-202ENST00000450649 ARHGAP39Q9C0H5 1083 aa16.43■□□□□ 0.22
SCUBE2-202ENST00000450649 ANKRA2Q9H9E1 313 aa16.43■□□□□ 0.22
SCUBE2-202ENST00000450649 RDH14Q9HBH5 336 aa16.43■□□□□ 0.22
SCUBE2-202ENST00000450649 ARL15Q9NXU5 204 aa16.43■□□□□ 0.22
SCUBE2-202ENST00000450649 MALT1Q9UDY8 824 aa16.43■□□□□ 0.22
SCUBE2-202ENST00000450649 GREB1Q4ZG55 1949 aa16.43■□□□□ 0.22
SCUBE2-202ENST00000450649 TSPAN9O75954 239 aa16.43■□□□□ 0.22
SCUBE2-202ENST00000450649 PRKAR1AP10644 381 aa16.43■□□□□ 0.22
SCUBE2-202ENST00000450649 SDC2P34741 201 aa16.43■□□□□ 0.22
SCUBE2-202ENST00000450649 FEN1P39748 380 aaKnown RBP16.43■□□□□ 0.22
SCUBE2-202ENST00000450649 RPS24P62847 133 aaKnown RBP16.43■□□□□ 0.22
SCUBE2-202ENST00000450649 GAB1Q13480 694 aa16.43■□□□□ 0.22
SCUBE2-202ENST00000450649 GANABQ14697 944 aaKnown RBP16.43■□□□□ 0.22
SCUBE2-202ENST00000450649 ZNF628Q5EBL2 1059 aa16.43■□□□□ 0.22
SCUBE2-202ENST00000450649 GPRC6AQ5T6X5 926 aa16.43■□□□□ 0.22
SCUBE2-202ENST00000450649 NANOGP1Q8N7R0 232 aa16.43■□□□□ 0.22
SCUBE2-202ENST00000450649 FAM193BQ96PV7 902 aaPredicted RBP16.43■□□□□ 0.22
SCUBE2-202ENST00000450649 ZSCAN5AQ9BUG6 496 aa16.43■□□□□ 0.22
SCUBE2-202ENST00000450649 DUSP26Q9BV47 211 aa16.43■□□□□ 0.22
SCUBE2-202ENST00000450649 GPR63Q9BZJ6 419 aa16.43■□□□□ 0.22
SCUBE2-202ENST00000450649 FZD3Q9NPG1 666 aa16.43■□□□□ 0.22
SCUBE2-202ENST00000450649 AP1M2Q9Y6Q5 423 aa16.43■□□□□ 0.22
SCUBE2-202ENST00000450649 C1orf226A1L170 272 aa16.42■□□□□ 0.22
SCUBE2-202ENST00000450649 I3L521 148 aa16.42■□□□□ 0.22
SCUBE2-202ENST00000450649 LYRM1O43325 122 aa16.42■□□□□ 0.22
SCUBE2-202ENST00000450649 CLDN11O75508 207 aa16.42■□□□□ 0.22
SCUBE2-202ENST00000450649 HLA-DQB1P01920 261 aa16.42■□□□□ 0.22
SCUBE2-202ENST00000450649 MLLT11Q13015 90 aaPredicted RBP16.42■□□□□ 0.22
SCUBE2-202ENST00000450649 SF1Q15637 639 aaKnown RBP16.42■□□□□ 0.22
SCUBE2-202ENST00000450649 ANGPTL8Q6UXH0 198 aa16.42■□□□□ 0.22
SCUBE2-202ENST00000450649 RBFAQ8N0V3 343 aa16.42■□□□□ 0.22
SCUBE2-202ENST00000450649 MARVELD1Q9BSK0 173 aa16.42■□□□□ 0.22
SCUBE2-202ENST00000450649 AFF4Q9UHB7 1163 aaKnown RBP16.42■□□□□ 0.22
SCUBE2-202ENST00000450649 ENOPH1Q9UHY7 261 aa16.42■□□□□ 0.22
SCUBE2-202ENST00000450649 BTN3A3O00478 584 aa16.42■□□□□ 0.22
SCUBE2-202ENST00000450649 PRAMEF1O95521 474 aa16.42■□□□□ 0.22
SCUBE2-202ENST00000450649 ZNF250P15622 560 aa16.42■□□□□ 0.22
SCUBE2-202ENST00000450649 TNNI3P19429 210 aa16.42■□□□□ 0.22
SCUBE2-202ENST00000450649 RPIAP49247 311 aa16.42■□□□□ 0.22
SCUBE2-202ENST00000450649 FKBP1BP68106 108 aa16.42■□□□□ 0.22
SCUBE2-202ENST00000450649 MRPL58Q14197 206 aaKnown RBP16.42■□□□□ 0.22
SCUBE2-202ENST00000450649 NCF4Q15080 339 aa16.42■□□□□ 0.22
SCUBE2-202ENST00000450649 ZXDCQ2QGD7 858 aaPredicted RBP16.42■□□□□ 0.22
SCUBE2-202ENST00000450649 MEDAGQ5VYS4 303 aa16.42■□□□□ 0.22
SCUBE2-202ENST00000450649 OR8H3Q8N146 312 aa16.42■□□□□ 0.22
SCUBE2-202ENST00000450649 SLC37A3Q8NCC5 494 aa16.42■□□□□ 0.22
SCUBE2-202ENST00000450649 NELL2Q99435 816 aa16.42■□□□□ 0.22
SCUBE2-202ENST00000450649 PCDH10Q9P2E7 1040 aa16.42■□□□□ 0.22
SCUBE2-202ENST00000450649 LOC102723532A0A0G2JNH3 316 aa16.42■□□□□ 0.22
SCUBE2-202ENST00000450649 OR6C75A6NL08 312 aa16.42■□□□□ 0.22
SCUBE2-202ENST00000450649 TLR4O00206 839 aa16.42■□□□□ 0.22
SCUBE2-202ENST00000450649 PRMT3O60678 531 aa16.42■□□□□ 0.22
SCUBE2-202ENST00000450649 GADD45GO95257 159 aa16.42■□□□□ 0.22
SCUBE2-202ENST00000450649 C1SP09871 688 aa16.42■□□□□ 0.22
SCUBE2-202ENST00000450649 CRATP43155 626 aa16.42■□□□□ 0.22
SCUBE2-202ENST00000450649 SLC11A2P49281 568 aa16.42■□□□□ 0.22
SCUBE2-202ENST00000450649 PER3P56645 1201 aa16.42■□□□□ 0.22
SCUBE2-202ENST00000450649 RAB25P57735 213 aa16.42■□□□□ 0.22
SCUBE2-202ENST00000450649 ABATP80404 500 aa16.42■□□□□ 0.22
SCUBE2-202ENST00000450649 ALDH6A1Q02252 535 aaKnown RBP16.42■□□□□ 0.22
SCUBE2-202ENST00000450649 GGTA1PQ4G0N0 100 aa16.42■□□□□ 0.22
SCUBE2-202ENST00000450649 TMIGD1Q6UXZ0 262 aa16.42■□□□□ 0.22
SCUBE2-202ENST00000450649 PDZD3Q86UT5 571 aa16.42■□□□□ 0.22
SCUBE2-202ENST00000450649 PROKR2Q8NFJ6 384 aa16.42■□□□□ 0.22
SCUBE2-202ENST00000450649 THSD1Q9NS62 852 aa16.42■□□□□ 0.22
SCUBE2-202ENST00000450649 RHCGQ9UBD6 479 aa16.42■□□□□ 0.22
SCUBE2-202ENST00000450649 ELF5Q9UKW6 265 aaPredicted RBP16.42■□□□□ 0.22
SCUBE2-202ENST00000450649 NOD1Q9Y239 953 aa16.42■□□□□ 0.22
SCUBE2-202ENST00000450649 CBX4O00257 560 aa16.41■□□□□ 0.22
SCUBE2-202ENST00000450649 PITPNM1O00562 1244 aa16.41■□□□□ 0.22
SCUBE2-202ENST00000450649 ORC5O43913 435 aa16.41■□□□□ 0.22
SCUBE2-202ENST00000450649 PLOD3O60568 738 aa16.41■□□□□ 0.22
SCUBE2-202ENST00000450649 SLC43A1O75387 559 aa16.41■□□□□ 0.22
SCUBE2-202ENST00000450649 RFPL3O75679 317 aa16.41■□□□□ 0.22
SCUBE2-202ENST00000450649 TRBC1P01850 177 aa16.41■□□□□ 0.22
SCUBE2-202ENST00000450649 RHOCP08134 193 aa16.41■□□□□ 0.22
SCUBE2-202ENST00000450649 PCSK2P16519 638 aa16.41■□□□□ 0.22
SCUBE2-202ENST00000450649 LIMS1P48059 325 aa16.41■□□□□ 0.22
SCUBE2-202ENST00000450649 TWF1Q12792 350 aa16.41■□□□□ 0.22
SCUBE2-202ENST00000450649 C1DQ13901 141 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms