RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 MMP11P24347 488 aa18.1■□□□□ 0.49
HOXA9-202ENST00000396345 SLC1A6P48664 564 aa18.1■□□□□ 0.49
HOXA9-202ENST00000396345 SLAMF1Q13291 335 aa18.1■□□□□ 0.49
HOXA9-202ENST00000396345 DEFB109BQ30KR1 87 aa18.1■□□□□ 0.49
HOXA9-202ENST00000396345 CYP20A1Q6UW02 462 aa18.1■□□□□ 0.49
HOXA9-202ENST00000396345 PAGE2Q7Z2X7 111 aa18.1■□□□□ 0.49
HOXA9-202ENST00000396345 PPP1R32Q7Z5V6 425 aa18.1■□□□□ 0.49
HOXA9-202ENST00000396345 ZCCHC7Q8N3Z6 543 aaKnown RBP18.1■□□□□ 0.49
HOXA9-202ENST00000396345 AGR3Q8TD06 166 aa18.1■□□□□ 0.49
HOXA9-202ENST00000396345 ADAMTS18Q8TE60 1221 aa18.1■□□□□ 0.49
HOXA9-202ENST00000396345 THAP4Q8WY91 577 aa18.1■□□□□ 0.49
HOXA9-202ENST00000396345 CATSPER2Q96P56 530 aa18.1■□□□□ 0.49
HOXA9-202ENST00000396345 IP6K3Q96PC2 410 aa18.1■□□□□ 0.49
HOXA9-202ENST00000396345 MAPKAP1Q9BPZ7 522 aa18.1■□□□□ 0.49
HOXA9-202ENST00000396345 VN1R1Q9GZP7 353 aa18.1■□□□□ 0.49
HOXA9-202ENST00000396345 DDX31Q9H8H2 851 aaKnown RBP18.1■□□□□ 0.49
HOXA9-202ENST00000396345 ZDHHC2Q9UIJ5 367 aa18.1■□□□□ 0.49
HOXA9-202ENST00000396345 FBXW2Q9UKT8 454 aa18.1■□□□□ 0.49
HOXA9-202ENST00000396345 SPACA6W5XKT8 324 aa18.1■□□□□ 0.49
HOXA9-202ENST00000396345 A0A0A6YYD5 115 aa18.09■□□□□ 0.49
HOXA9-202ENST00000396345 OR2W5A6NFC9 320 aa18.09■□□□□ 0.49
HOXA9-202ENST00000396345 TMEM233B4DJY2 109 aa18.09■□□□□ 0.49
HOXA9-202ENST00000396345 ATP8B1O43520 1251 aa18.09■□□□□ 0.49
HOXA9-202ENST00000396345 SNUPNO95149 360 aaKnown RBP18.09■□□□□ 0.49
HOXA9-202ENST00000396345 PPP2R2AP63151 447 aa18.09■□□□□ 0.49
HOXA9-202ENST00000396345 HMGCS1Q01581 520 aa18.09■□□□□ 0.49
HOXA9-202ENST00000396345 BST1Q10588 318 aa18.09■□□□□ 0.49
HOXA9-202ENST00000396345 TBL3Q12788 808 aaKnown RBP18.09■□□□□ 0.49
HOXA9-202ENST00000396345 IMPG1Q17R60 797 aa18.09■□□□□ 0.49
HOXA9-202ENST00000396345 FAAH2Q6GMR7 532 aa18.09■□□□□ 0.49
HOXA9-202ENST00000396345 TRIM46Q7Z4K8 759 aa18.09■□□□□ 0.49
HOXA9-202ENST00000396345 MRGPREQ86SM8 312 aa18.09■□□□□ 0.49
HOXA9-202ENST00000396345 TRIM42Q8IWZ5 723 aa18.09■□□□□ 0.49
HOXA9-202ENST00000396345 NACC2Q96BF6 587 aa18.09■□□□□ 0.49
HOXA9-202ENST00000396345 ZNF395Q9H8N7 513 aaPredicted RBP18.09■□□□□ 0.49
HOXA9-202ENST00000396345 LYARQ9NX58 379 aaKnown RBP18.09■□□□□ 0.49
HOXA9-202ENST00000396345 KCMF1Q9P0J7 381 aa18.09■□□□□ 0.49
HOXA9-202ENST00000396345 ADAM29Q9UKF5 820 aa18.09■□□□□ 0.49
HOXA9-202ENST00000396345 CHD6Q8TD26 2715 aa18.08■□□□□ 0.49
HOXA9-202ENST00000396345 PEX12O00623 359 aa18.08■□□□□ 0.48
HOXA9-202ENST00000396345 ALOX12BO75342 701 aa18.08■□□□□ 0.48
HOXA9-202ENST00000396345 GBAP04062 536 aa18.08■□□□□ 0.48
HOXA9-202ENST00000396345 KLK1P06870 262 aa18.08■□□□□ 0.48
HOXA9-202ENST00000396345 CYC1P08574 325 aa18.08■□□□□ 0.48
HOXA9-202ENST00000396345 EFNA3P52797 238 aa18.08■□□□□ 0.48
HOXA9-202ENST00000396345 RHAGQ02094 409 aa18.08■□□□□ 0.48
HOXA9-202ENST00000396345 ATP1A4Q13733 1029 aa18.08■□□□□ 0.48
HOXA9-202ENST00000396345 UGT3A2Q3SY77 523 aa18.08■□□□□ 0.48
HOXA9-202ENST00000396345 ATG16L1Q676U5 607 aa18.08■□□□□ 0.48
HOXA9-202ENST00000396345 MED25Q71SY5 747 aa18.08■□□□□ 0.48
HOXA9-202ENST00000396345 COMMD6Q7Z4G1 85 aa18.08■□□□□ 0.48
HOXA9-202ENST00000396345 C1orf52Q8N6N3 182 aaKnown RBP18.08■□□□□ 0.48
HOXA9-202ENST00000396345 FAM47BQ8NA70 645 aa18.08■□□□□ 0.48
HOXA9-202ENST00000396345 RAB3IL1Q8TBN0 382 aa18.08■□□□□ 0.48
HOXA9-202ENST00000396345 CHTF18Q8WVB6 975 aa18.08■□□□□ 0.48
HOXA9-202ENST00000396345 METTL21AQ8WXB1 218 aa18.08■□□□□ 0.48
HOXA9-202ENST00000396345 CSF3RQ99062 836 aa18.08■□□□□ 0.48
HOXA9-202ENST00000396345 C20orf27Q9GZN8 174 aa18.08■□□□□ 0.48
HOXA9-202ENST00000396345 ILKAPQ9H0C8 392 aaPredicted RBP18.08■□□□□ 0.48
HOXA9-202ENST00000396345 MANSC1Q9H8J5 431 aa18.08■□□□□ 0.48
HOXA9-202ENST00000396345 PHF11Q9UIL8 331 aa18.08■□□□□ 0.48
HOXA9-202ENST00000396345 MRPS33Q9Y291 106 aaKnown RBP18.08■□□□□ 0.48
HOXA9-202ENST00000396345 MAN2B2Q9Y2E5 1009 aa18.08■□□□□ 0.48
HOXA9-202ENST00000396345 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.08■□□□□ 0.48
HOXA9-202ENST00000396345 DNAJC15Q9Y5T4 150 aa18.08■□□□□ 0.48
HOXA9-202ENST00000396345 HS3ST3B1Q9Y662 390 aa18.08■□□□□ 0.48
HOXA9-202ENST00000396345 ARHGAP10A1A4S6 786 aa18.07■□□□□ 0.48
HOXA9-202ENST00000396345 SLC28A1O00337 649 aa18.07■□□□□ 0.48
HOXA9-202ENST00000396345 CYR61O00622 381 aa18.07■□□□□ 0.48
HOXA9-202ENST00000396345 SOCS6O14544 535 aa18.07■□□□□ 0.48
HOXA9-202ENST00000396345 PCDH17O14917 1159 aa18.07■□□□□ 0.48
HOXA9-202ENST00000396345 TMPRSS11DO60235 418 aa18.07■□□□□ 0.48
HOXA9-202ENST00000396345 PRMT3O60678 531 aa18.07■□□□□ 0.48
HOXA9-202ENST00000396345 FAM58BPP0C7Q3 252 aa18.07■□□□□ 0.48
HOXA9-202ENST00000396345 C8orf89P0DMQ9 161 aa18.07■□□□□ 0.48
HOXA9-202ENST00000396345 CPN2P22792 545 aa18.07■□□□□ 0.48
HOXA9-202ENST00000396345 TPP2P29144 1249 aaPredicted RBP18.07■□□□□ 0.48
HOXA9-202ENST00000396345 BTKQ06187 659 aa18.07■□□□□ 0.48
HOXA9-202ENST00000396345 SPIN4Q56A73 249 aa18.07■□□□□ 0.48
HOXA9-202ENST00000396345 SPDYAQ5MJ70 313 aa18.07■□□□□ 0.48
HOXA9-202ENST00000396345 CCNYL2Q5T2Q4 361 aa18.07■□□□□ 0.48
HOXA9-202ENST00000396345 MRM1Q6IN84 353 aaKnown RBP18.07■□□□□ 0.48
HOXA9-202ENST00000396345 TMEM205Q6UW68 189 aa18.07■□□□□ 0.48
HOXA9-202ENST00000396345 QSOX2Q6ZRP7 698 aa18.07■□□□□ 0.48
HOXA9-202ENST00000396345 RNF165Q6ZSG1 346 aa18.07■□□□□ 0.48
HOXA9-202ENST00000396345 GPR180Q86V85 440 aa18.07■□□□□ 0.48
HOXA9-202ENST00000396345 ZNF595Q8IYB9 648 aa18.07■□□□□ 0.48
HOXA9-202ENST00000396345 EFCAB3Q8N7B9 438 aa18.07■□□□□ 0.48
HOXA9-202ENST00000396345 PLPP5Q8NEB5 264 aa18.07■□□□□ 0.48
HOXA9-202ENST00000396345 TWIST2Q8WVJ9 160 aa18.07■□□□□ 0.48
HOXA9-202ENST00000396345 VPS50Q96JG6 964 aa18.07■□□□□ 0.48
HOXA9-202ENST00000396345 PTCHD1Q96NR3 888 aa18.07■□□□□ 0.48
HOXA9-202ENST00000396345 SORT1Q99523 831 aa18.07■□□□□ 0.48
HOXA9-202ENST00000396345 TUBB1Q9H4B7 451 aa18.07■□□□□ 0.48
HOXA9-202ENST00000396345 P4HTMQ9NXG6 502 aa18.07■□□□□ 0.48
HOXA9-202ENST00000396345 MS4A12Q9NXJ0 267 aa18.07■□□□□ 0.48
HOXA9-202ENST00000396345 RAP2CQ9Y3L5 183 aa18.07■□□□□ 0.48
HOXA9-202ENST00000396345 PTGDR2Q9Y5Y4 395 aa18.07■□□□□ 0.48
HOXA9-202ENST00000396345 CLDN4O14493 209 aa18.06■□□□□ 0.48
HOXA9-202ENST00000396345 RGS14O43566 566 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms