RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 ZNF623O75123 536 aa12.4□□□□□ -0.43
PTPRK-207ENST00000368226 SEMA4FO95754 770 aa12.4□□□□□ -0.43
PTPRK-207ENST00000368226 PRH1P02810 166 aa12.4□□□□□ -0.43
PTPRK-207ENST00000368226 SLC18A1P54219 525 aa12.4□□□□□ -0.43
PTPRK-207ENST00000368226 CLDN2P57739 230 aa12.4□□□□□ -0.43
PTPRK-207ENST00000368226 RAB2AP61019 212 aa12.4□□□□□ -0.43
PTPRK-207ENST00000368226 PMS2P3Q13401 168 aa12.4□□□□□ -0.43
PTPRK-207ENST00000368226 SGCAQ16586 387 aa12.4□□□□□ -0.43
PTPRK-207ENST00000368226 TECRLQ5HYJ1 363 aa12.4□□□□□ -0.43
PTPRK-207ENST00000368226 DNM1P34Q6PK57 102 aa12.4□□□□□ -0.43
PTPRK-207ENST00000368226 SPERTQ8NA61 448 aa12.4□□□□□ -0.43
PTPRK-207ENST00000368226 OR52B6Q8NGF0 335 aa12.4□□□□□ -0.43
PTPRK-207ENST00000368226 OR8H1Q8NGG4 311 aa12.4□□□□□ -0.43
PTPRK-207ENST00000368226 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.4□□□□□ -0.43
PTPRK-207ENST00000368226 ZFR2Q9UPR6 939 aaKnown RBP12.4□□□□□ -0.43
PTPRK-207ENST00000368226 COL2A1P02458 1487 aaPredicted RBP12.39□□□□□ -0.43
PTPRK-207ENST00000368226 UQCRC2P22695 453 aa12.39□□□□□ -0.43
PTPRK-207ENST00000368226 SIM1P81133 766 aaPredicted RBP12.39□□□□□ -0.43
PTPRK-207ENST00000368226 CATSPEREQ5SY80 951 aa12.39□□□□□ -0.43
PTPRK-207ENST00000368226 PDSS1Q5T2R2 415 aa12.39□□□□□ -0.43
PTPRK-207ENST00000368226 ZNF783Q6ZMS7 281 aa12.39□□□□□ -0.43
PTPRK-207ENST00000368226 OR51A7Q8NH64 312 aa12.39□□□□□ -0.43
PTPRK-207ENST00000368226 H3BNX3 289 aa12.39□□□□□ -0.43
PTPRK-207ENST00000368226 ONECUT3O60422 494 aaPredicted RBP12.39□□□□□ -0.43
PTPRK-207ENST00000368226 ELK4P28324 431 aa12.39□□□□□ -0.43
PTPRK-207ENST00000368226 SOX9P48436 509 aa12.39□□□□□ -0.43
PTPRK-207ENST00000368226 HHEXQ03014 270 aa12.39□□□□□ -0.43
PTPRK-207ENST00000368226 PIGFQ07326 219 aa12.39□□□□□ -0.43
PTPRK-207ENST00000368226 DOC2AQ14183 400 aa12.39□□□□□ -0.43
PTPRK-207ENST00000368226 ZNF630Q2M218 657 aaPredicted RBP12.39□□□□□ -0.43
PTPRK-207ENST00000368226 UNC50Q53HI1 259 aa12.39□□□□□ -0.43
PTPRK-207ENST00000368226 RAET1LQ5VY80 246 aa12.39□□□□□ -0.43
PTPRK-207ENST00000368226 REEP3Q6NUK4 255 aa12.39□□□□□ -0.43
PTPRK-207ENST00000368226 CDHR3Q6ZTQ4 885 aa12.39□□□□□ -0.43
PTPRK-207ENST00000368226 CARM1Q86X55 608 aa12.39□□□□□ -0.43
PTPRK-207ENST00000368226 OR51G2Q8NGK0 314 aa12.39□□□□□ -0.43
PTPRK-207ENST00000368226 NPLQ9BXD5 320 aaPredicted RBP12.39□□□□□ -0.43
PTPRK-207ENST00000368226 DEFB126Q9BYW3 111 aa12.39□□□□□ -0.43
PTPRK-207ENST00000368226 BRF2Q9HAW0 419 aa12.39□□□□□ -0.43
PTPRK-207ENST00000368226 SQORQ9Y6N5 450 aa12.39□□□□□ -0.43
PTPRK-207ENST00000368226 MATN2O00339 956 aa12.39□□□□□ -0.43
PTPRK-207ENST00000368226 CDRT1O95170 752 aa12.39□□□□□ -0.43
PTPRK-207ENST00000368226 PLATP00750 562 aa12.39□□□□□ -0.43
PTPRK-207ENST00000368226 CSTAP01040 98 aa12.39□□□□□ -0.43
PTPRK-207ENST00000368226 SHC2P98077 582 aa12.39□□□□□ -0.43
PTPRK-207ENST00000368226 ZNF33AQ06730 810 aa12.39□□□□□ -0.43
PTPRK-207ENST00000368226 IRF5Q13568 498 aa12.39□□□□□ -0.43
PTPRK-207ENST00000368226 KCNC3Q14003 757 aa12.39□□□□□ -0.43
PTPRK-207ENST00000368226 DEFB133Q30KQ1 61 aa12.39□□□□□ -0.43
PTPRK-207ENST00000368226 ARSJQ5FYB0 599 aaPredicted RBP12.39□□□□□ -0.43
PTPRK-207ENST00000368226 NANOGP8Q6NSW7 305 aa12.39□□□□□ -0.43
PTPRK-207ENST00000368226 TIFABQ6ZNK6 161 aa12.39□□□□□ -0.43
PTPRK-207ENST00000368226 MND1Q9BWT6 205 aa12.39□□□□□ -0.43
PTPRK-207ENST00000368226 SLC17A9Q9BYT1 436 aa12.39□□□□□ -0.43
PTPRK-207ENST00000368226 VRTNQ9H8Y1 702 aa12.39□□□□□ -0.43
PTPRK-207ENST00000368226 NANOGQ9H9S0 305 aa12.39□□□□□ -0.43
PTPRK-207ENST00000368226 ZNF69Q9UC07 566 aa12.39□□□□□ -0.43
PTPRK-207ENST00000368226 SARDHQ9UL12 918 aa12.39□□□□□ -0.43
PTPRK-207ENST00000368226 SLC35E2BP0CK96 405 aa12.39□□□□□ -0.43
PTPRK-207ENST00000368226 CTSAP10619 480 aa12.39□□□□□ -0.43
PTPRK-207ENST00000368226 NAA10P41227 235 aaPredicted RBP12.39□□□□□ -0.43
PTPRK-207ENST00000368226 KCNC1P48547 511 aa12.39□□□□□ -0.43
PTPRK-207ENST00000368226 AFF1P51825 1210 aaKnown RBP12.39□□□□□ -0.43
PTPRK-207ENST00000368226 ZNF852Q6ZMS4 543 aa12.39□□□□□ -0.43
PTPRK-207ENST00000368226 ZC3H3Q8IXZ2 948 aaKnown RBP12.39□□□□□ -0.43
PTPRK-207ENST00000368226 RAB7BQ96AH8 199 aa12.39□□□□□ -0.43
PTPRK-207ENST00000368226 EIF3KQ9UBQ5 218 aaKnown RBP12.39□□□□□ -0.43
PTPRK-207ENST00000368226 CPNE6O95741 557 aa12.38□□□□□ -0.43
PTPRK-207ENST00000368226 SNU13P55769 128 aaKnown RBP12.38□□□□□ -0.43
PTPRK-207ENST00000368226 OR2B6P58173 313 aa12.38□□□□□ -0.43
PTPRK-207ENST00000368226 KCNC4Q03721 635 aa12.38□□□□□ -0.43
PTPRK-207ENST00000368226 LIPJQ5W064 366 aa12.38□□□□□ -0.43
PTPRK-207ENST00000368226 GALNT15Q8N3T1 639 aa12.38□□□□□ -0.43
PTPRK-207ENST00000368226 NATD1Q8N6N6 113 aa12.38□□□□□ -0.43
PTPRK-207ENST00000368226 OR8S1Q8NH09 359 aa12.38□□□□□ -0.43
PTPRK-207ENST00000368226 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.38□□□□□ -0.43
PTPRK-207ENST00000368226 ETAA1Q9NY74 926 aa12.38□□□□□ -0.43
PTPRK-207ENST00000368226 SLC2A2P11168 524 aaPredicted RBP12.38□□□□□ -0.43
PTPRK-207ENST00000368226 PFKLP17858 780 aa12.38□□□□□ -0.43
PTPRK-207ENST00000368226 AAK1Q2M2I8 961 aa12.38□□□□□ -0.43
PTPRK-207ENST00000368226 SHISA6Q6ZSJ9 500 aa12.38□□□□□ -0.43
PTPRK-207ENST00000368226 HUS1BQ8NHY5 278 aa12.38□□□□□ -0.43
PTPRK-207ENST00000368226 PPP4R1LQ9P1A2 415 aa12.38□□□□□ -0.43
PTPRK-207ENST00000368226 GJB3O75712 270 aa12.38□□□□□ -0.43
PTPRK-207ENST00000368226 ABHD18Q0P651 414 aa12.38□□□□□ -0.43
PTPRK-207ENST00000368226 PRAMEF17Q5VTA0 474 aa12.38□□□□□ -0.43
PTPRK-207ENST00000368226 DUS1LQ6P1R4 473 aaKnown RBP12.38□□□□□ -0.43
PTPRK-207ENST00000368226 KBTBD6Q86V97 674 aa12.38□□□□□ -0.43
PTPRK-207ENST00000368226 ZNF548Q8NEK5 533 aaPredicted RBP12.38□□□□□ -0.43
PTPRK-207ENST00000368226 TCEAL4Q96EI5 215 aa12.38□□□□□ -0.43
PTPRK-207ENST00000368226 ZNF382Q96SR6 550 aa12.38□□□□□ -0.43
PTPRK-207ENST00000368226 FAM129BQ96TA1 746 aa12.38□□□□□ -0.43
PTPRK-207ENST00000368226 MACROD1Q9BQ69 325 aa12.38□□□□□ -0.43
PTPRK-207ENST00000368226 MS4A12Q9NXJ0 267 aa12.38□□□□□ -0.43
PTPRK-207ENST00000368226 ACTR3BQ9P1U1 418 aa12.38□□□□□ -0.43
PTPRK-207ENST00000368226 UPB1Q9UBR1 384 aa12.38□□□□□ -0.43
PTPRK-207ENST00000368226 ZSCAN5BA6NJL1 495 aa12.38□□□□□ -0.43
PTPRK-207ENST00000368226 NPIPA2E9PIF3 369 aa12.38□□□□□ -0.43
PTPRK-207ENST00000368226 NPIPA3F8WFD2 350 aa12.38□□□□□ -0.43
PTPRK-207ENST00000368226 ZNF821O75541 412 aaPredicted RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms