RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 CIDEAO60543 219 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 FCGR3BO75015 233 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 CDK2AP2O75956 126 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 PPP1R3DO95685 299 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 CLPTM1O96005 669 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 IGHV4-59P01825 116 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 YES1P07947 543 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 ZFYP08048 801 aaPredicted RBP2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 HMBSP08397 361 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 FAM58BPP0C7Q3 252 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 IGHV4-31P0DP07 118 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 FERP16591 822 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 ITIH1P19827 911 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 HLA-DPA1P20036 260 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 JAK1P23458 1154 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 PIK3R1P27986 724 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 CDKN1AP38936 164 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 NBL1P41271 181 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 PRKCIP41743 596 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 CDX1P47902 265 aaPredicted RBP2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 ST8SIA6P61647 398 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 ASIC1P78348 528 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 CDR2Q01850 454 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 SLC3A1Q07837 685 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 SIGLEC14Q08ET2 396 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 PRKAA1Q13131 559 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 TNK1Q13470 666 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 TRIM29Q14134 588 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 E2F5Q15329 346 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 CA9Q16790 459 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 ITPRIPL2Q3MIP1 535 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 CCDC158Q5M9N0 1113 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 STXBP5Q5T5C0 1151 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 WLSQ5T9L3 541 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 STPG1Q5TH74 334 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 TTC27Q6P3X3 843 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 IYDQ6PHW0 289 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 LIN28BQ6ZN17 250 aaKnown RBP eCLIP2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 SH2D5Q6ZV89 423 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 TMEM179Q6ZVK1 233 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 FCRLAQ7L513 359 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 OTOAQ7RTW8 1153 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 DSG4Q86SJ6 1040 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 TMPRSS11BQ86T26 416 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 MMD2Q8IY49 270 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 CCDC170Q8IYT3 715 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 FAM89BQ8N5H3 189 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 KLHDC9Q8NEP7 349 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 OR7G3Q8NG95 312 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 TRAF3IP1Q8TDR0 691 aaPredicted RBP2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 ZFAND2BQ8WV99 257 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 ZNRF4Q8WWF5 429 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 CORO2AQ92828 525 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 P2RX5Q93086 422 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 MRPL38Q96DV4 380 aaKnown RBP2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 FBXO17Q96EF6 278 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 SPATA33Q96N06 139 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 INTS14Q96SY0 518 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 CDCA3Q99618 268 aaPredicted RBP2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 TRMT61BQ9BVS5 477 aaKnown RBP2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 TEX13BQ9BXU2 312 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 MRPL9Q9BYD2 267 aaKnown RBP2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 LAT2Q9GZY6 243 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 UPF3AQ9H1J1 476 aaKnown RBP2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 S1PR5Q9H228 398 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 PORCNQ9H237 461 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 ALDH8A1Q9H2A2 487 aaPredicted RBP2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 UBQLN3Q9H347 655 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 MINDY3Q9H8M7 445 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 ZNF556Q9HAH1 456 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 DNAJC17Q9NVM6 304 aaKnown RBP2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 C2orf42Q9NWW7 574 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 COMMD8Q9NX08 183 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 P4HTMQ9NXG6 502 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 PTTG2Q9NZH5 202 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 DAPK2Q9UIK4 370 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 KCNJ14Q9UNX9 436 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 PA2G4Q9UQ80 394 aaKnown RBP2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 TNNQ9UQP3 1299 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 RUVBL2Q9Y230 463 aaKnown RBP2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 ZNF292O60281 2723 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 CHD6Q8TD26 2715 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 RFX7Q2KHR2 1363 aa2.36□□□□□ -2.03
RNU6-1140P-201ENST00000410517 MYO15AQ9UKN7 3530 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 ATRXP46100 2492 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 CFAP47Q6ZTR5 3102 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 PTPRZ1P23471 2315 aaPredicted RBP2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 BPTFQ12830 3046 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 A0A1W2PPM1 405 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 C5orf52A6NGY3 159 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 DDX39AO00148 427 aaKnown RBP2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 EXTL3O43909 919 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 LMX1BO60663 402 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 CLN5O75503 358 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 ATP6AP2O75787 350 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 FLOT1O75955 427 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 GJB5O95377 273 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 TGDSO95455 350 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 GAS8O95995 478 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 GSRP00390 522 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms