RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 NIPSNAP1Q9BPW8 284 aa9.44□□□□□ -0.9
CLIP1-204ENST00000501271 SORBS1Q9BX66 1292 aaKnown RBP9.44□□□□□ -0.9
CLIP1-204ENST00000501271 MYNNQ9NPC7 610 aa9.44□□□□□ -0.9
CLIP1-204ENST00000501271 C1GALT1Q9NS00 363 aa9.44□□□□□ -0.9
CLIP1-204ENST00000501271 ATAD3AQ9NVI7 634 aa9.44□□□□□ -0.9
CLIP1-204ENST00000501271 SELENONQ9NZV5 590 aa9.44□□□□□ -0.9
CLIP1-204ENST00000501271 DOLKQ9UPQ8 538 aa9.44□□□□□ -0.9
CLIP1-204ENST00000501271 MAP4K5Q9Y4K4 846 aa9.44□□□□□ -0.9
CLIP1-204ENST00000501271 FUOMA2VDF0 154 aa9.44□□□□□ -0.9
CLIP1-204ENST00000501271 PRRT4C9JH25 899 aa9.44□□□□□ -0.9
CLIP1-204ENST00000501271 J3KTA2 159 aa9.44□□□□□ -0.9
CLIP1-204ENST00000501271 MRPS14O60783 128 aaKnown RBP9.44□□□□□ -0.9
CLIP1-204ENST00000501271 GPR37L1O60883 481 aa9.44□□□□□ -0.9
CLIP1-204ENST00000501271 NADKO95544 446 aaPredicted RBP9.44□□□□□ -0.9
CLIP1-204ENST00000501271 ADH5P11766 374 aa9.44□□□□□ -0.9
CLIP1-204ENST00000501271 C6P13671 934 aa9.44□□□□□ -0.9
CLIP1-204ENST00000501271 C21orf33P30042 268 aaPredicted RBP9.44□□□□□ -0.9
CLIP1-204ENST00000501271 GGT2P36268 569 aa9.44□□□□□ -0.9
CLIP1-204ENST00000501271 GPR1P46091 355 aa9.44□□□□□ -0.9
CLIP1-204ENST00000501271 RAB15P59190 212 aa9.44□□□□□ -0.9
CLIP1-204ENST00000501271 EEF1A2Q05639 463 aaKnown RBP9.44□□□□□ -0.9
CLIP1-204ENST00000501271 EXOC3L2Q2M3D2 409 aa9.44□□□□□ -0.9
CLIP1-204ENST00000501271 FAM83HQ6ZRV2 1179 aaPredicted RBP9.44□□□□□ -0.9
CLIP1-204ENST00000501271 VN1R5Q7Z5H4 357 aa9.44□□□□□ -0.9
CLIP1-204ENST00000501271 CCDC103Q8IW40 242 aa9.44□□□□□ -0.9
CLIP1-204ENST00000501271 METTL4Q8N3J2 472 aa9.44□□□□□ -0.9
CLIP1-204ENST00000501271 C2orf73Q8N5S3 287 aaPredicted RBP9.44□□□□□ -0.9
CLIP1-204ENST00000501271 PROX1Q92786 737 aa9.44□□□□□ -0.9
CLIP1-204ENST00000501271 NRTNQ99748 197 aa9.44□□□□□ -0.9
CLIP1-204ENST00000501271 EHD1Q9H4M9 534 aa9.44□□□□□ -0.9
CLIP1-204ENST00000501271 HMG20AQ9NP66 347 aa9.44□□□□□ -0.9
CLIP1-204ENST00000501271 PLAGL1Q9UM63 463 aa9.44□□□□□ -0.9
CLIP1-204ENST00000501271 CHD9Q3L8U1 2897 aa9.44□□□□□ -0.9
CLIP1-204ENST00000501271 SOBPA7XYQ1 873 aa9.43□□□□□ -0.9
CLIP1-204ENST00000501271 PAPLNO95428 1278 aa9.43□□□□□ -0.9
CLIP1-204ENST00000501271 IL3P08700 152 aa9.43□□□□□ -0.9
CLIP1-204ENST00000501271 CD36P16671 472 aa9.43□□□□□ -0.9
CLIP1-204ENST00000501271 ACADLP28330 430 aa9.43□□□□□ -0.9
CLIP1-204ENST00000501271 SLC19A1P41440 591 aa9.43□□□□□ -0.9
CLIP1-204ENST00000501271 PXNP49023 591 aaPredicted RBP9.43□□□□□ -0.9
CLIP1-204ENST00000501271 CCR3P51677 355 aa9.43□□□□□ -0.9
CLIP1-204ENST00000501271 ST8SIA6P61647 398 aa9.43□□□□□ -0.9
CLIP1-204ENST00000501271 CDK6Q00534 326 aa9.43□□□□□ -0.9
CLIP1-204ENST00000501271 UBE2UQ5VVX9 321 aa9.43□□□□□ -0.9
CLIP1-204ENST00000501271 SNX29P2Q8IUI4 249 aa9.43□□□□□ -0.9
CLIP1-204ENST00000501271 EGFL6Q8IUX8 553 aa9.43□□□□□ -0.9
CLIP1-204ENST00000501271 P3H2Q8IVL5 708 aa9.43□□□□□ -0.9
CLIP1-204ENST00000501271 LGI4Q8N135 537 aa9.43□□□□□ -0.9
CLIP1-204ENST00000501271 MFSD4AQ8N468 514 aa9.43□□□□□ -0.9
CLIP1-204ENST00000501271 OXR1Q8N573 874 aa9.43□□□□□ -0.9
CLIP1-204ENST00000501271 OR9Q2Q8NGE9 314 aa9.43□□□□□ -0.9
CLIP1-204ENST00000501271 POF1BQ8WVV4 589 aa9.43□□□□□ -0.9
CLIP1-204ENST00000501271 RSPRY1Q96DX4 576 aa9.43□□□□□ -0.9
CLIP1-204ENST00000501271 COPS4Q9BT78 406 aa9.43□□□□□ -0.9
CLIP1-204ENST00000501271 ZDHHC5Q9C0B5 715 aa9.43□□□□□ -0.9
CLIP1-204ENST00000501271 ZCCHC2Q9C0B9 1178 aaKnown RBP9.43□□□□□ -0.9
CLIP1-204ENST00000501271 TMEM38AQ9H6F2 299 aa9.43□□□□□ -0.9
CLIP1-204ENST00000501271 AMBNQ9NP70 447 aa9.43□□□□□ -0.9
CLIP1-204ENST00000501271 CCDC177Q9NQR7 707 aaPredicted RBP9.43□□□□□ -0.9
CLIP1-204ENST00000501271 ITM2CQ9NQX7 267 aa9.43□□□□□ -0.9
CLIP1-204ENST00000501271 SAGE1Q9NXZ1 904 aa9.43□□□□□ -0.9
CLIP1-204ENST00000501271 TAS2R9Q9NYW1 312 aa9.43□□□□□ -0.9
CLIP1-204ENST00000501271 SPASTQ9UBP0 616 aa9.43□□□□□ -0.9
CLIP1-204ENST00000501271 PRKAB1Q9Y478 270 aa9.43□□□□□ -0.9
CLIP1-204ENST00000501271 PCDHGA2Q9Y5H1 932 aa9.43□□□□□ -0.9
CLIP1-204ENST00000501271 DENND4AQ7Z401 1863 aa9.43□□□□□ -0.9
CLIP1-204ENST00000501271 PRAMEF33A0A0G2JMD5 474 aa9.43□□□□□ -0.9
CLIP1-204ENST00000501271 M0R129 80 aa9.43□□□□□ -0.9
CLIP1-204ENST00000501271 PRAMEF10O60809 474 aa9.43□□□□□ -0.9
CLIP1-204ENST00000501271 MMP20O60882 483 aa9.43□□□□□ -0.9
CLIP1-204ENST00000501271 POP7O75817 140 aaKnown RBP9.43□□□□□ -0.9
CLIP1-204ENST00000501271 PRNPP04156 253 aa9.43□□□□□ -0.9
CLIP1-204ENST00000501271 BMP4P12644 408 aa9.43□□□□□ -0.9
CLIP1-204ENST00000501271 ITGB7P26010 798 aa9.43□□□□□ -0.9
CLIP1-204ENST00000501271 CTNNB1P35222 781 aa9.43□□□□□ -0.9
CLIP1-204ENST00000501271 SOAT1P35610 550 aa9.43□□□□□ -0.9
CLIP1-204ENST00000501271 CHI3L1P36222 383 aaPredicted RBP9.43□□□□□ -0.9
CLIP1-204ENST00000501271 LIPAP38571 399 aa9.43□□□□□ -0.9
CLIP1-204ENST00000501271 RXRGP48443 463 aa9.43□□□□□ -0.9
CLIP1-204ENST00000501271 PRIM2P49643 509 aa9.43□□□□□ -0.9
CLIP1-204ENST00000501271 FPGSQ05932 587 aa9.43□□□□□ -0.9
CLIP1-204ENST00000501271 RBBP4Q09028 425 aa9.43□□□□□ -0.9
CLIP1-204ENST00000501271 FADDQ13158 208 aa9.43□□□□□ -0.9
CLIP1-204ENST00000501271 CYP2A13Q16696 494 aa9.43□□□□□ -0.9
CLIP1-204ENST00000501271 HIST2H2ACQ16777 129 aaPredicted RBP9.43□□□□□ -0.9
CLIP1-204ENST00000501271 DGUOKQ16854 277 aa9.43□□□□□ -0.9
CLIP1-204ENST00000501271 MICAQ29983 383 aa9.43□□□□□ -0.9
CLIP1-204ENST00000501271 C10orf62Q5T681 223 aaPredicted RBP9.43□□□□□ -0.9
CLIP1-204ENST00000501271 EGFLAMQ63HQ2 1017 aa9.43□□□□□ -0.9
CLIP1-204ENST00000501271 HIST2H2AA3Q6FI13 130 aa9.43□□□□□ -0.9
CLIP1-204ENST00000501271 CCDC80Q76M96 950 aa9.43□□□□□ -0.9
CLIP1-204ENST00000501271 SPRED2Q7Z698 418 aa9.43□□□□□ -0.9
CLIP1-204ENST00000501271 C11orf96Q7Z7L8 435 aa9.43□□□□□ -0.9
CLIP1-204ENST00000501271 SFTPA1Q8IWL2 248 aa9.43□□□□□ -0.9
CLIP1-204ENST00000501271 ERLEC1Q96DZ1 483 aa9.43□□□□□ -0.9
CLIP1-204ENST00000501271 ALPK1Q96QP1 1244 aa9.43□□□□□ -0.9
CLIP1-204ENST00000501271 WDR12Q9GZL7 423 aaKnown RBP9.43□□□□□ -0.9
CLIP1-204ENST00000501271 SLC6A16Q9GZN6 736 aa9.43□□□□□ -0.9
CLIP1-204ENST00000501271 ARMC7Q9H6L4 198 aa9.43□□□□□ -0.9
CLIP1-204ENST00000501271 PRDM8Q9NQV8 689 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms