RNA–Protein interactions for RNA: ENST00000480227.5

PKD1-213, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 1 (best)

Gene PKD1, Length 2,353 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-213ENST00000480227 FAM129BQ96TA1 746 aa16.4■□□□□ 0.22
PKD1-213ENST00000480227 ZDHHC5Q9C0B5 715 aa16.4■□□□□ 0.22
PKD1-213ENST00000480227 CCDC177Q9NQR7 707 aaPredicted RBP16.4■□□□□ 0.22
PKD1-213ENST00000480227 RLIMQ9NVW2 624 aa16.4■□□□□ 0.22
PKD1-213ENST00000480227 MAPRE3Q9UPY8 281 aa16.4■□□□□ 0.22
PKD1-213ENST00000480227 PCDHGA6Q9Y5G7 932 aa16.4■□□□□ 0.22
PKD1-213ENST00000480227 LYVE1Q9Y5Y7 322 aa16.4■□□□□ 0.22
PKD1-213ENST00000480227 FOXE1O00358 373 aaPredicted RBP16.4■□□□□ 0.22
PKD1-213ENST00000480227 LCKP06239 509 aa16.4■□□□□ 0.22
PKD1-213ENST00000480227 MYOGP15173 224 aa16.4■□□□□ 0.22
PKD1-213ENST00000480227 ST13P50502 369 aaKnown RBP16.4■□□□□ 0.22
PKD1-213ENST00000480227 VASPP50552 380 aaPredicted RBP16.4■□□□□ 0.22
PKD1-213ENST00000480227 NCS1P62166 190 aa16.4■□□□□ 0.22
PKD1-213ENST00000480227 ELP6Q0PNE2 266 aa16.4■□□□□ 0.22
PKD1-213ENST00000480227 SCARB2Q14108 478 aa16.4■□□□□ 0.22
PKD1-213ENST00000480227 HIST2H2ACQ16777 129 aaPredicted RBP16.4■□□□□ 0.22
PKD1-213ENST00000480227 PAGE2BQ5JRK9 111 aa16.4■□□□□ 0.22
PKD1-213ENST00000480227 SYT6Q5T7P8 510 aaPredicted RBP16.4■□□□□ 0.22
PKD1-213ENST00000480227 HIST2H2AA3Q6FI13 130 aa16.4■□□□□ 0.22
PKD1-213ENST00000480227 NXPE4Q6UWF7 544 aa16.4■□□□□ 0.22
PKD1-213ENST00000480227 TMC5Q6UXY8 1006 aa16.4■□□□□ 0.22
PKD1-213ENST00000480227 RNF130Q86XS8 419 aa16.4■□□□□ 0.22
PKD1-213ENST00000480227 MMAAQ8IVH4 418 aaKnown RBP16.4■□□□□ 0.22
PKD1-213ENST00000480227 SLC5A8Q8N695 610 aa16.4■□□□□ 0.22
PKD1-213ENST00000480227 DNASE1L2Q92874 299 aa16.4■□□□□ 0.22
PKD1-213ENST00000480227 YIPF6Q96EC8 236 aa16.4■□□□□ 0.22
PKD1-213ENST00000480227 WDR34Q96EX3 536 aa16.4■□□□□ 0.22
PKD1-213ENST00000480227 ATAD3AQ9NVI7 634 aa16.4■□□□□ 0.22
PKD1-213ENST00000480227 TBCCD1Q9NVR7 557 aa16.4■□□□□ 0.22
PKD1-213ENST00000480227 LMCD1Q9NZU5 365 aa16.4■□□□□ 0.22
PKD1-213ENST00000480227 ASF1AQ9Y294 204 aa16.4■□□□□ 0.22
PKD1-213ENST00000480227 CFAP20Q9Y6A4 193 aaKnown RBP16.4■□□□□ 0.22
PKD1-213ENST00000480227 MYO9BQ13459 2157 aa16.39■□□□□ 0.21
PKD1-213ENST00000480227 SOBPA7XYQ1 873 aa16.39■□□□□ 0.21
PKD1-213ENST00000480227 HEPACAM2A8MVW5 462 aa16.39■□□□□ 0.21
PKD1-213ENST00000480227 TNFRSF21O75509 655 aa16.39■□□□□ 0.21
PKD1-213ENST00000480227 ACADLP28330 430 aa16.39■□□□□ 0.21
PKD1-213ENST00000480227 CHI3L1P36222 383 aaPredicted RBP16.39■□□□□ 0.21
PKD1-213ENST00000480227 CDH12P55289 794 aa16.39■□□□□ 0.21
PKD1-213ENST00000480227 SPIBQ01892 262 aa16.39■□□□□ 0.21
PKD1-213ENST00000480227 PPIGQ13427 754 aaKnown RBP eCLIP16.39■□□□□ 0.211e-6■■□□□ 13.3
PKD1-213ENST00000480227 GAB4Q2WGN9 574 aa16.39■□□□□ 0.21
PKD1-213ENST00000480227 GCNT6Q5T4J0 391 aa16.39■□□□□ 0.21
PKD1-213ENST00000480227 C11orf96Q7Z7L8 435 aa16.39■□□□□ 0.21
PKD1-213ENST00000480227 RPL3LQ92901 407 aaKnown RBP16.39■□□□□ 0.21
PKD1-213ENST00000480227 TAMM41Q96BW9 452 aa16.39■□□□□ 0.21
PKD1-213ENST00000480227 HRASLS5Q96KN8 279 aa16.39■□□□□ 0.21
PKD1-213ENST00000480227 ZNF347Q96SE7 839 aa16.39■□□□□ 0.21
PKD1-213ENST00000480227 PITX2Q99697 317 aa16.39■□□□□ 0.21
PKD1-213ENST00000480227 ALOXE3Q9BYJ1 711 aa16.39■□□□□ 0.21
PKD1-213ENST00000480227 RNF6Q9Y252 685 aa16.39■□□□□ 0.21
PKD1-213ENST00000480227 C2orf16Q68DN1 1984 aa16.39■□□□□ 0.21
PKD1-213ENST00000480227 ALPK3Q96L96 1907 aa16.39■□□□□ 0.21
PKD1-213ENST00000480227 MUC22E2RYF6 1773 aaPredicted RBP16.39■□□□□ 0.21
PKD1-213ENST00000480227 SLC22A1O15245 554 aa16.38■□□□□ 0.21
PKD1-213ENST00000480227 SOAT1P35610 550 aa16.38■□□□□ 0.21
PKD1-213ENST00000480227 TGFBR1P36897 503 aa16.38■□□□□ 0.21
PKD1-213ENST00000480227 ZNF234Q14588 700 aa16.38■□□□□ 0.21
PKD1-213ENST00000480227 SLC5A12Q1EHB4 618 aa16.38■□□□□ 0.21
PKD1-213ENST00000480227 TMEM236Q5W0B7 351 aa16.38■□□□□ 0.21
PKD1-213ENST00000480227 VN1R5Q7Z5H4 357 aa16.38■□□□□ 0.21
PKD1-213ENST00000480227 P3H2Q8IVL5 708 aa16.38■□□□□ 0.21
PKD1-213ENST00000480227 SVOPQ8N4V2 548 aa16.38■□□□□ 0.21
PKD1-213ENST00000480227 PALMDQ9NP74 551 aa16.38■□□□□ 0.21
PKD1-213ENST00000480227 CCNB1IP1Q9NPC3 277 aa16.38■□□□□ 0.21
PKD1-213ENST00000480227 ITM2CQ9NQX7 267 aa16.38■□□□□ 0.21
PKD1-213ENST00000480227 TM7SF3Q9NS93 570 aa16.38■□□□□ 0.21
PKD1-213ENST00000480227 DOLKQ9UPQ8 538 aa16.38■□□□□ 0.21
PKD1-213ENST00000480227 KIF26AQ9ULI4 1882 aaPredicted RBP16.38■□□□□ 0.21
PKD1-213ENST00000480227 EDDM13A0A1B0GTR0 161 aa16.38■□□□□ 0.21
PKD1-213ENST00000480227 LINC01553A4QN01 128 aa16.38■□□□□ 0.21
PKD1-213ENST00000480227 PRAMEF25A6NGN4 478 aa16.38■□□□□ 0.21
PKD1-213ENST00000480227 CLDN25C9JDP6 229 aa16.38■□□□□ 0.21
PKD1-213ENST00000480227 J3KTA2 159 aa16.38■□□□□ 0.21
PKD1-213ENST00000480227 CBFA2T3O75081 653 aa16.38■□□□□ 0.21
PKD1-213ENST00000480227 NADKO95544 446 aaPredicted RBP16.38■□□□□ 0.21
PKD1-213ENST00000480227 IL3P08700 152 aa16.38■□□□□ 0.21
PKD1-213ENST00000480227 ELAVL3Q14576 367 aaKnown RBP16.38■□□□□ 0.21
PKD1-213ENST00000480227 RGS21Q2M5E4 152 aa16.38■□□□□ 0.21
PKD1-213ENST00000480227 IFI44LQ53G44 452 aa16.38■□□□□ 0.21
PKD1-213ENST00000480227 TMEM240Q5SV17 173 aa16.38■□□□□ 0.21
PKD1-213ENST00000480227 FAM71E1Q6IPT2 247 aa16.38■□□□□ 0.21
PKD1-213ENST00000480227 RTL10Q7L3V2 364 aa16.38■□□□□ 0.21
PKD1-213ENST00000480227 PRSS48Q7RTY5 328 aa16.38■□□□□ 0.21
PKD1-213ENST00000480227 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.38■□□□□ 0.21
PKD1-213ENST00000480227 TMIEQ8NEW7 156 aa16.38■□□□□ 0.21
PKD1-213ENST00000480227 OR10G2Q8NGC3 310 aa16.38■□□□□ 0.21
PKD1-213ENST00000480227 OR52N2Q8NGI0 321 aa16.38■□□□□ 0.21
PKD1-213ENST00000480227 OR2L2Q8NH16 312 aa16.38■□□□□ 0.21
PKD1-213ENST00000480227 GOT1L1Q8NHS2 421 aaPredicted RBP16.38■□□□□ 0.21
PKD1-213ENST00000480227 CXorf40BQ96DE9 158 aa16.38■□□□□ 0.21
PKD1-213ENST00000480227 SELENONQ9NZV5 590 aa16.38■□□□□ 0.21
PKD1-213ENST00000480227 DEC1Q9P2X7 70 aa16.38■□□□□ 0.21
PKD1-213ENST00000480227 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.38■□□□□ 0.21
PKD1-213ENST00000480227 ERGIC3Q9Y282 383 aa16.38■□□□□ 0.21
PKD1-213ENST00000480227 ADAMDEC1O15204 470 aa16.37■□□□□ 0.21
PKD1-213ENST00000480227 FUT4P22083 530 aa16.37■□□□□ 0.21
PKD1-213ENST00000480227 C21orf33P30042 268 aaPredicted RBP16.37■□□□□ 0.21
PKD1-213ENST00000480227 IDH2P48735 452 aaKnown RBP16.37■□□□□ 0.21
PKD1-213ENST00000480227 PDE7AQ13946 482 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms