RNA–Protein interactions for RNA: YPR039W

YPR039W, Transcript of Dubious open reading frame, yeast

Gene YPR039W, Length 336 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPR039W	YPR039W	GNT1	Q12096	491 aa		3.88	□□□□□ -1.79
YPR039W	YPR039W	PNS1	Q12412	539 aa		3.88	□□□□□ -1.79
YPR039W	YPR039W	HCM1	P25364	564 aa		3.87	□□□□□ -1.79
YPR039W	YPR039W	DUT1	P33317	147 aa		3.87	□□□□□ -1.79
YPR039W	YPR039W	SLA2	P33338	968 aa		3.87	□□□□□ -1.79
YPR039W	YPR039W	TRM2	P33753	639 aa		3.87	□□□□□ -1.79
YPR039W	YPR039W	VPS62	P53285	467 aa		3.87	□□□□□ -1.79
YPR039W	YPR039W	PBP1	P53297	722 aa	Known RBP	3.87	□□□□□ -1.79
YPR039W	YPR039W	SUN4	P53616	420 aa		3.87	□□□□□ -1.79
YPR039W	YPR039W	RMD1	Q03441	430 aa		3.87	□□□□□ -1.79
YPR039W	YPR039W	YLR224W	Q05947	369 aa		3.87	□□□□□ -1.79
YPR039W	YPR039W	SPP382	Q06411	708 aa	Predicted RBP	3.87	□□□□□ -1.79
YPR039W	YPR039W	ATG13	Q06628	738 aa		3.87	□□□□□ -1.79
YPR039W	YPR039W	XYL2	Q07993	356 aa		3.87	□□□□□ -1.79
YPR039W	YPR039W	ACM1	Q08981	209 aa		3.87	□□□□□ -1.79
YPR039W	YPR039W	YPL066W	Q12194	479 aa		3.87	□□□□□ -1.79
YPR039W	YPR039W	MNN10	P50108	393 aa	Known RBP	3.86	□□□□□ -1.79
YPR039W	YPR039W	SLI1	P53304	468 aa		3.86	□□□□□ -1.79
YPR039W	YPR039W	EEB1	Q02891	456 aa		3.86	□□□□□ -1.79
YPR039W	YPR039W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	3.86	□□□□□ -1.79	not detected
YPR039W	YPR039W	SIZ1	Q04195	904 aa		3.86	□□□□□ -1.79
YPR039W	YPR039W	HMI1	Q12039	706 aa		3.86	□□□□□ -1.79
YPR039W	YPR039W	PUS9	Q12069	462 aa		3.86	□□□□□ -1.79
YPR039W	YPR039W	TRP2	P00899	507 aa	Known RBP	3.85	□□□□□ -1.79
YPR039W	YPR039W	INO1	P11986	533 aa		3.85	□□□□□ -1.79
YPR039W	YPR039W	PNT1	P38969	423 aa		3.85	□□□□□ -1.79
YPR039W	YPR039W	PLB1	P39105	664 aa		3.85	□□□□□ -1.79
YPR039W	YPR039W	SIP5	P40210	489 aa	Known RBP	3.85	□□□□□ -1.79
YPR039W	YPR039W	MTC3	P53077	123 aa		3.85	□□□□□ -1.79
YPR039W	YPR039W	LYP1	P32487	611 aa		3.84	□□□□□ -1.79
YPR039W	YPR039W	GEM1	P39722	662 aa		3.84	□□□□□ -1.79
YPR039W	YPR039W	MND2	P40577	368 aa		3.84	□□□□□ -1.79
YPR039W	YPR039W	YGL176C	P46945	554 aa		3.84	□□□□□ -1.79
YPR039W	YPR039W	TYW3	P53177	273 aa		3.84	□□□□□ -1.79
YPR039W	YPR039W	YLR225C	Q05948	407 aa	Known RBP	3.84	□□□□□ -1.79
YPR039W	YPR039W	TPO1	Q07824	586 aa		3.84	□□□□□ -1.79
YPR039W	YPR039W	TMA46	Q12000	345 aa	Known RBP	3.84	□□□□□ -1.79
YPR039W	YPR039W	NTO1	Q12311	748 aa		3.84	□□□□□ -1.79
YPR039W	YPR039W	ENA1	P13587	1091 aa		3.83	□□□□□ -1.8
YPR039W	YPR039W	YKL151C	P36059	337 aa		3.83	□□□□□ -1.8
YPR039W	YPR039W	ZRG8	P40021	1076 aa		3.83	□□□□□ -1.8
YPR039W	YPR039W	MSE1	P48525	536 aa		3.83	□□□□□ -1.8
YPR039W	YPR039W	ENA2	Q01896	1091 aa		3.83	□□□□□ -1.8
YPR039W	YPR039W	ESC2	Q06340	456 aa		3.83	□□□□□ -1.8
YPR039W	YPR039W	ENA5	Q12691	1091 aa		3.83	□□□□□ -1.8
YPR039W	YPR039W	CDC34	P14682	295 aa		3.82	□□□□□ -1.8
YPR039W	YPR039W	PET112	P33893	541 aa		3.82	□□□□□ -1.8
YPR039W	YPR039W	RRT14	P40470	206 aa		3.82	□□□□□ -1.8
YPR039W	YPR039W	STE11	P23561	717 aa		3.81	□□□□□ -1.8
YPR039W	YPR039W	HRQ1	Q05549	1077 aa		3.81	□□□□□ -1.8
YPR039W	YPR039W	PMA1	P05030	918 aa	Known RBP	3.8	□□□□□ -1.8
YPR039W	YPR039W	MNR2	P35724	969 aa		3.8	□□□□□ -1.8
YPR039W	YPR039W	POA1	P38218	177 aa		3.8	□□□□□ -1.8
YPR039W	YPR039W	YAP1801	P38856	637 aa		3.8	□□□□□ -1.8
YPR039W	YPR039W	MET12	P46151	657 aa		3.8	□□□□□ -1.8
YPR039W	YPR039W	KIN4	Q01919	800 aa		3.8	□□□□□ -1.8
YPR039W	YPR039W	ADY3	Q07732	790 aa		3.8	□□□□□ -1.8
YPR039W	YPR039W	NOP12	Q08208	459 aa	Known RBP	3.8	□□□□□ -1.8
YPR039W	YPR039W	DCG1	P32460	244 aa		3.79	□□□□□ -1.8
YPR039W	YPR039W	YKL107W	P34251	309 aa		3.79	□□□□□ -1.8
YPR039W	YPR039W	MSS4	P38994	779 aa		3.79	□□□□□ -1.8
YPR039W	YPR039W	AIM21	P40563	679 aa		3.79	□□□□□ -1.8
YPR039W	YPR039W	SNU71	P53207	620 aa	Known RBP	3.79	□□□□□ -1.8
YPR039W	YPR039W	SVF1	Q05515	481 aa		3.79	□□□□□ -1.8
YPR039W	YPR039W	OSW2	Q12202	724 aa		3.79	□□□□□ -1.8
YPR039W	YPR039W	RKM4	Q12504	494 aa		3.79	□□□□□ -1.8
YPR039W	YPR039W	THS1	P04801	734 aa	Known RBP	3.78	□□□□□ -1.8
YPR039W	YPR039W	HIS5	P07172	385 aa		3.78	□□□□□ -1.8
YPR039W	YPR039W	NAP1	P25293	417 aa	Known RBP	3.78	□□□□□ -1.8
YPR039W	YPR039W	PMI40	P29952	429 aa	Known RBP	3.78	□□□□□ -1.8
YPR039W	YPR039W	ABD1	P32783	436 aa	Predicted RBP	3.78	□□□□□ -1.8
YPR039W	YPR039W	SRP101	P32916	621 aa		3.78	□□□□□ -1.8
YPR039W	YPR039W	MET10	P39692	1035 aa		3.78	□□□□□ -1.8
YPR039W	YPR039W	NPP2	P39997	493 aa		3.78	□□□□□ -1.8
YPR039W	YPR039W	TAD3	Q9URQ3	322 aa		3.78	□□□□□ -1.8
YPR039W	YPR039W	DEF1	P35732	738 aa	Known RBP	3.77	□□□□□ -1.81
YPR039W	YPR039W	MBP1	P39678	833 aa		3.77	□□□□□ -1.81
YPR039W	YPR039W	CHA4	P43634	648 aa		3.77	□□□□□ -1.81
YPR039W	YPR039W	FAA4	P47912	694 aa	Known RBP	3.77	□□□□□ -1.81
YPR039W	YPR039W	YGR012W	P53206	393 aa		3.77	□□□□□ -1.81
YPR039W	YPR039W	GIS1	Q03833	894 aa		3.77	□□□□□ -1.81
YPR039W	YPR039W	CDA1	Q06702	301 aa		3.77	□□□□□ -1.81
YPR039W	YPR039W	WHI4	Q07655	649 aa	Known RBP	3.77	□□□□□ -1.81
YPR039W	YPR039W	MDM38	Q08179	573 aa		3.77	□□□□□ -1.81
YPR039W	YPR039W	CLN2	P20438	545 aa		3.76	□□□□□ -1.81
YPR039W	YPR039W	GIC1	P38785	314 aa		3.76	□□□□□ -1.81
YPR039W	YPR039W	SAH1	P39954	449 aa	Known RBP	3.76	□□□□□ -1.81
YPR039W	YPR039W	MAD1	P40957	749 aa		3.76	□□□□□ -1.81
YPR039W	YPR039W	YGR053C	P53234	283 aa		3.76	□□□□□ -1.81
YPR039W	YPR039W	SFB2	P53953	876 aa		3.76	□□□□□ -1.81
YPR039W	YPR039W	CTF4	Q01454	927 aa		3.76	□□□□□ -1.81
YPR039W	YPR039W	JIP5	Q06214	492 aa	Predicted RBP	3.76	□□□□□ -1.81
YPR039W	YPR039W	KCS1	Q12494	1050 aa		3.76	□□□□□ -1.81
YPR039W	YPR039W	ECM21	P38167	1117 aa	Known RBP	3.75	□□□□□ -1.81
YPR039W	YPR039W	CHS7	P38843	316 aa		3.75	□□□□□ -1.81
YPR039W	YPR039W	EXG2	P52911	562 aa		3.75	□□□□□ -1.81
YPR039W	YPR039W	GDE1	Q02979	1223 aa		3.75	□□□□□ -1.81
YPR039W	YPR039W	SRT1	Q03175	343 aa		3.75	□□□□□ -1.81
YPR039W	YPR039W	SPO20	Q04359	397 aa		3.75	□□□□□ -1.81
YPR039W	YPR039W	SPE1	P08432	466 aa		3.74	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms