RNA–Protein interactions for RNA: YPL056C

LCL1, Transcript of Putative protein of unknown function, yeast

Gene LCL1, Length 306 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LCL1	YPL056C	HSP42	Q12329	375 aa		2.87	□□□□□ -1.95
LCL1	YPL056C	HTZ1	Q12692	134 aa	Known RBP	2.87	□□□□□ -1.95
LCL1	YPL056C	TRS33	Q99394	268 aa		2.87	□□□□□ -1.95
LCL1	YPL056C	RPO41	P13433	1351 aa	Known RBP	2.87	□□□□□ -1.95
LCL1	YPL056C	COB	P00163	385 aa		2.86	□□□□□ -1.95
LCL1	YPL056C	HEM1	P09950	548 aa	Predicted RBP	2.86	□□□□□ -1.95
LCL1	YPL056C	YMR085W	P0CF18	432 aa		2.86	□□□□□ -1.95
LCL1	YPL056C	SSC1	P0CS90	654 aa	Known RBP	2.86	□□□□□ -1.95
LCL1	YPL056C	ADE2	P21264	571 aa	Known RBP	2.86	□□□□□ -1.95
LCL1	YPL056C	OSM1	P21375	501 aa	Known RBP	2.86	□□□□□ -1.95
LCL1	YPL056C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	2.86	□□□□□ -1.95	not detected
LCL1	YPL056C	GUT1	P32190	709 aa		2.86	□□□□□ -1.95
LCL1	YPL056C	YEL043W	P32618	956 aa		2.86	□□□□□ -1.95
LCL1	YPL056C	RPC34	P32910	317 aa		2.86	□□□□□ -1.95
LCL1	YPL056C	BUD2	P33314	1104 aa		2.86	□□□□□ -1.95
LCL1	YPL056C	NIP100	P33420	868 aa		2.86	□□□□□ -1.95
LCL1	YPL056C	NPL4	P33755	580 aa		2.86	□□□□□ -1.95
LCL1	YPL056C	SEG2	P34250	1132 aa		2.86	□□□□□ -1.95
LCL1	YPL056C	YKL133C	P36066	463 aa		2.86	□□□□□ -1.95
LCL1	YPL056C	YBR242W	P38331	238 aa		2.86	□□□□□ -1.95
LCL1	YPL056C	REI1	P38344	393 aa	Predicted RBP	2.86	□□□□□ -1.95
LCL1	YPL056C	ETP1	P38748	585 aa	Known RBP	2.86	□□□□□ -1.95
LCL1	YPL056C	SCS2	P40075	244 aa	Known RBP	2.86	□□□□□ -1.95
LCL1	YPL056C	GVP36	P40531	326 aa	Known RBP	2.86	□□□□□ -1.95
LCL1	YPL056C	MDJ2	P42834	146 aa		2.86	□□□□□ -1.95
LCL1	YPL056C	LAM5	P43560	674 aa		2.86	□□□□□ -1.95
LCL1	YPL056C	OSW7	P43611	510 aa		2.86	□□□□□ -1.95
LCL1	YPL056C	TRS85	P46944	698 aa		2.86	□□□□□ -1.95
LCL1	YPL056C	TY4A-J	P47023	414 aa		2.86	□□□□□ -1.95
LCL1	YPL056C	SGM1	P47166	707 aa		2.86	□□□□□ -1.95
LCL1	YPL056C	PCL10	P53124	433 aa		2.86	□□□□□ -1.95
LCL1	YPL056C	SDA1	P53313	767 aa	Known RBP	2.86	□□□□□ -1.95
LCL1	YPL056C	HXT17	P53631	564 aa		2.86	□□□□□ -1.95
LCL1	YPL056C	PNG1	Q02890	363 aa		2.86	□□□□□ -1.95
LCL1	YPL056C	DML1	Q03652	475 aa		2.86	□□□□□ -1.95
LCL1	YPL056C	CWC15	Q03772	175 aa	Known RBP	2.86	□□□□□ -1.95
LCL1	YPL056C	SXM1	Q04175	944 aa	Known RBP	2.86	□□□□□ -1.95
LCL1	YPL056C	SGD1	Q06132	899 aa		2.86	□□□□□ -1.95
LCL1	YPL056C	YLR271W	Q06152	274 aa		2.86	□□□□□ -1.95
LCL1	YPL056C	SPP382	Q06411	708 aa	Predicted RBP	2.86	□□□□□ -1.95
LCL1	YPL056C	THI22	Q06490	572 aa		2.86	□□□□□ -1.95
LCL1	YPL056C	ATG23	Q06671	453 aa		2.86	□□□□□ -1.95
LCL1	YPL056C	NOP12	Q08208	459 aa	Known RBP	2.86	□□□□□ -1.95
LCL1	YPL056C	APC5	Q08683	685 aa		2.86	□□□□□ -1.95
LCL1	YPL056C	YOR296W	Q08748	1289 aa		2.86	□□□□□ -1.95
LCL1	YPL056C	CTI6	Q08923	506 aa		2.86	□□□□□ -1.95
LCL1	YPL056C	RKM1	Q08961	583 aa	Predicted RBP	2.86	□□□□□ -1.95
LCL1	YPL056C	RIO1	Q12196	484 aa	Known RBP	2.86	□□□□□ -1.95
LCL1	YPL056C	GPR1	Q12361	961 aa		2.86	□□□□□ -1.95
LCL1	YPL056C	OCA6	Q12454	224 aa		2.86	□□□□□ -1.95
LCL1	YPL056C	REP1	P03871	373 aa		2.85	□□□□□ -1.95
LCL1	YPL056C	RSR1	P13856	272 aa		2.85	□□□□□ -1.95
LCL1	YPL056C	CMP2	P14747	604 aa		2.85	□□□□□ -1.95
LCL1	YPL056C	SEN2	P16658	377 aa		2.85	□□□□□ -1.95
LCL1	YPL056C	GDA1	P32621	518 aa		2.85	□□□□□ -1.95
LCL1	YPL056C	NPL6	P32832	435 aa		2.85	□□□□□ -1.95
LCL1	YPL056C	ARC19	P33204	171 aa	Known RBP	2.85	□□□□□ -1.95
LCL1	YPL056C	YKL222C	P35995	705 aa		2.85	□□□□□ -1.95
LCL1	YPL056C	OCT1	P35999	772 aa		2.85	□□□□□ -1.95
LCL1	YPL056C	DBP7	P36120	742 aa	Known RBP	2.85	□□□□□ -1.95
LCL1	YPL056C	PCH2	P38126	564 aa		2.85	□□□□□ -1.95
LCL1	YPL056C	RCR1	P38212	213 aa		2.85	□□□□□ -1.95
LCL1	YPL056C	APD1	P38281	316 aa		2.85	□□□□□ -1.95
LCL1	YPL056C	GGA2	P38817	585 aa	Known RBP	2.85	□□□□□ -1.95
LCL1	YPL056C	NMD3	P38861	518 aa	Known RBP	2.85	□□□□□ -1.95
LCL1	YPL056C	REV7	P38927	245 aa		2.85	□□□□□ -1.95
LCL1	YPL056C	CCC2	P38995	1004 aa		2.85	□□□□□ -1.95
LCL1	YPL056C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	2.85	□□□□□ -1.95	not detected
LCL1	YPL056C	CAJ1	P39101	391 aa		2.85	□□□□□ -1.95
LCL1	YPL056C	RTR1	P40084	226 aa	Predicted RBP	2.85	□□□□□ -1.95
LCL1	YPL056C	AXL1	P40851	1208 aa		2.85	□□□□□ -1.95
LCL1	YPL056C	SAP185	P40856	1058 aa		2.85	□□□□□ -1.95
LCL1	YPL056C	PXA1	P41909	870 aa		2.85	□□□□□ -1.95
LCL1	YPL056C	GPD2	P41911	440 aa	Known RBP	2.85	□□□□□ -1.95
LCL1	YPL056C	XKS1	P42826	600 aa		2.85	□□□□□ -1.95
LCL1	YPL056C	MIC19	P43594	170 aa		2.85	□□□□□ -1.95
LCL1	YPL056C	JJJ2	P46997	583 aa		2.85	□□□□□ -1.95
LCL1	YPL056C	STR2	P47164	639 aa		2.85	□□□□□ -1.95
LCL1	YPL056C	ENP2	P48234	707 aa	Known RBP	2.85	□□□□□ -1.95
LCL1	YPL056C	APT1	P49435	187 aa	Known RBP	2.85	□□□□□ -1.95
LCL1	YPL056C	IMD4	P50094	524 aa	Known RBP	2.85	□□□□□ -1.95
LCL1	YPL056C	RPA14	P50106	137 aa		2.85	□□□□□ -1.95
LCL1	YPL056C	FMS1	P50264	508 aa		2.85	□□□□□ -1.95
LCL1	YPL056C	TEL2	P53038	688 aa		2.85	□□□□□ -1.95
LCL1	YPL056C	UTP22	P53254	1237 aa	Predicted RBP	2.85	□□□□□ -1.95
LCL1	YPL056C	YGR266W	P53326	701 aa		2.85	□□□□□ -1.95
LCL1	YPL056C	ADA2	Q02336	434 aa		2.85	□□□□□ -1.95
LCL1	YPL056C	SPO71	Q03868	1245 aa		2.85	□□□□□ -1.95
LCL1	YPL056C	RSM24	Q03976	319 aa		2.85	□□□□□ -1.95
LCL1	YPL056C	PPM1	Q04081	328 aa		2.85	□□□□□ -1.95
LCL1	YPL056C	ECM11	Q04110	302 aa		2.85	□□□□□ -1.95
LCL1	YPL056C	MAG2	Q06436	670 aa	Known RBP	2.85	□□□□□ -1.95
LCL1	YPL056C	YCG1	Q06680	1035 aa		2.85	□□□□□ -1.95
LCL1	YPL056C	YPR097W	Q06839	1073 aa		2.85	□□□□□ -1.95
LCL1	YPL056C	YDL073W	Q07454	984 aa		2.85	□□□□□ -1.95
LCL1	YPL056C	TMA16	Q08687	178 aa		2.85	□□□□□ -1.95
LCL1	YPL056C	APL4	Q12028	832 aa		2.85	□□□□□ -1.95
LCL1	YPL056C	MAK21	Q12176	1025 aa	Known RBP	2.85	□□□□□ -1.95
LCL1	YPL056C	IES3	Q12345	250 aa		2.85	□□□□□ -1.95
LCL1	YPL056C	YOL098C	Q12496	1037 aa		2.85	□□□□□ -1.95

Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms