RNA–Protein interactions for RNA: YNL163C

RIA1, Transcript of Cytoplasmic GTPase/eEF2-like factor involved in ribosomal biogenesis, yeast

Gene RIA1, Length 3,333 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIA1	YNL163C	PDC6	P26263	563 aa	Known RBP	4.61	□□□□□ -1.67
RIA1	YNL163C	ASF1	P32447	279 aa		4.61	□□□□□ -1.67
RIA1	YNL163C	YBP1	P38315	674 aa		4.61	□□□□□ -1.67
RIA1	YNL163C	FYV8	P46949	817 aa	Known RBP	4.61	□□□□□ -1.67
RIA1	YNL163C	BOP3	P53958	396 aa		4.61	□□□□□ -1.67
RIA1	YNL163C	ALD6	P54115	500 aa	Known RBP	4.61	□□□□□ -1.67
RIA1	YNL163C	JIP4	Q03361	876 aa		4.61	□□□□□ -1.67
RIA1	YNL163C	YMR114C	Q04471	368 aa	Known RBP	4.61	□□□□□ -1.67
RIA1	YNL163C	GRX7	P38068	203 aa		4.61	□□□□□ -1.67
RIA1	YNL163C	GRS1	P38088	690 aa	Known RBP	4.61	□□□□□ -1.67
RIA1	YNL163C	KIC1	P38692	1080 aa		4.61	□□□□□ -1.67
RIA1	YNL163C	RSM7	P47150	247 aa		4.61	□□□□□ -1.67
RIA1	YNL163C	VPS62	P53285	467 aa		4.61	□□□□□ -1.67
RIA1	YNL163C	VAC14	Q06708	880 aa		4.61	□□□□□ -1.67
RIA1	YNL163C	PSK2	Q08217	1101 aa		4.61	□□□□□ -1.67
RIA1	YNL163C	OSH2	Q12451	1283 aa		4.61	□□□□□ -1.67
RIA1	YNL163C	FBP1	P09201	348 aa		4.61	□□□□□ -1.67
RIA1	YNL163C	PRE8	P23639	250 aa		4.61	□□□□□ -1.67
RIA1	YNL163C	TGL1	P34163	548 aa		4.61	□□□□□ -1.67
RIA1	YNL163C	LDH1	P38139	375 aa		4.61	□□□□□ -1.67
RIA1	YNL163C	SHQ1	P40486	507 aa	Predicted RBP	4.61	□□□□□ -1.67
RIA1	YNL163C	YIR042C	P40586	236 aa		4.61	□□□□□ -1.67
RIA1	YNL163C	YJL007C	P47080	104 aa		4.61	□□□□□ -1.67
RIA1	YNL163C	YGR035C	P53222	116 aa		4.61	□□□□□ -1.67
RIA1	YNL163C	YNL011C	P53980	444 aa		4.61	□□□□□ -1.67
RIA1	YNL163C	MDM38	Q08179	573 aa		4.61	□□□□□ -1.67
RIA1	YNL163C	SLP1	Q12232	587 aa		4.61	□□□□□ -1.67
RIA1	YNL163C	TUB2	P02557	457 aa	Known RBP	4.6	□□□□□ -1.67
RIA1	YNL163C	GFA1	P14742	717 aa	Known RBP	4.6	□□□□□ -1.67
RIA1	YNL163C	PHO13	P19881	312 aa		4.6	□□□□□ -1.67
RIA1	YNL163C	SRM1	P21827	482 aa		4.6	□□□□□ -1.67
RIA1	YNL163C	XRS2	P33301	854 aa		4.6	□□□□□ -1.67
RIA1	YNL163C	YGR125W	P53273	1036 aa		4.6	□□□□□ -1.67
RIA1	YNL163C	LCB5	Q06147	687 aa	Known RBP	4.6	□□□□□ -1.67
RIA1	YNL163C	MET7	Q08645	548 aa		4.6	□□□□□ -1.67
RIA1	YNL163C	RIB2	Q12362	591 aa	Known RBP	4.6	□□□□□ -1.67
RIA1	YNL163C	PRP4	P20053	465 aa	Known RBP	4.6	□□□□□ -1.67
RIA1	YNL163C	RAD57	P25301	460 aa		4.6	□□□□□ -1.67
RIA1	YNL163C	DPH5	P32469	300 aa	Predicted RBP	4.6	□□□□□ -1.67
RIA1	YNL163C	EUG1	P32474	517 aa		4.6	□□□□□ -1.67
RIA1	YNL163C	KSP1	P38691	1029 aa	Known RBP	4.6	□□□□□ -1.67
RIA1	YNL163C	CCT2	P39076	527 aa	Known RBP	4.6	□□□□□ -1.67
RIA1	YNL163C	IES1	P43579	692 aa		4.6	□□□□□ -1.67
RIA1	YNL163C	TRS85	P46944	698 aa		4.6	□□□□□ -1.67
RIA1	YNL163C	PIP2	P52960	996 aa		4.6	□□□□□ -1.67
RIA1	YNL163C	NNF2	P53253	936 aa		4.6	□□□□□ -1.67
RIA1	YNL163C	SFB2	P53953	876 aa		4.6	□□□□□ -1.67
RIA1	YNL163C	EBS1	Q03466	884 aa	Known RBP	4.6	□□□□□ -1.67
RIA1	YNL163C	YLR407W	Q06070	228 aa		4.6	□□□□□ -1.67
RIA1	YNL163C	YPR097W	Q06839	1073 aa		4.6	□□□□□ -1.67
RIA1	YNL163C	SPO75	Q07798	868 aa		4.6	□□□□□ -1.67
RIA1	YNL163C	SUT2	Q12286	268 aa		4.6	□□□□□ -1.67
RIA1	YNL163C	RAD61	Q99359	647 aa		4.6	□□□□□ -1.67
RIA1	YNL163C	KRS1	P15180	591 aa	Known RBP	4.59	□□□□□ -1.67
RIA1	YNL163C	VAN1	P23642	535 aa		4.59	□□□□□ -1.67
RIA1	YNL163C	SEC20	P28791	383 aa		4.59	□□□□□ -1.67
RIA1	YNL163C	PSF2	P40359	213 aa		4.59	□□□□□ -1.67
RIA1	YNL163C	UBX4	P54730	416 aa		4.59	□□□□□ -1.67
RIA1	YNL163C	URH1	Q04179	340 aa		4.59	□□□□□ -1.67
RIA1	YNL163C	INM2	Q05533	292 aa		4.59	□□□□□ -1.67
RIA1	YNL163C	SPP382	Q06411	708 aa	Predicted RBP	4.59	□□□□□ -1.67
RIA1	YNL163C	CDC19	P00549	500 aa	Known RBP	4.59	□□□□□ -1.67
RIA1	YNL163C	TUF1	P02992	437 aa	Known RBP	4.59	□□□□□ -1.67
RIA1	YNL163C	GPI10	P30777	616 aa		4.59	□□□□□ -1.67
RIA1	YNL163C	SEC8	P32855	1065 aa		4.59	□□□□□ -1.67
RIA1	YNL163C	RTS1	P38903	757 aa		4.59	□□□□□ -1.67
RIA1	YNL163C	YPL109C	Q02981	657 aa		4.59	□□□□□ -1.67
RIA1	YNL163C	EST2	Q06163	884 aa		4.59	□□□□□ -1.67
RIA1	YNL163C	ISA1	Q07821	250 aa	Predicted RBP	4.59	□□□□□ -1.67
RIA1	YNL163C	TAH18	Q12181	623 aa		4.59	□□□□□ -1.67
RIA1	YNL163C	RME1	P32338	300 aa	Known RBP	4.59	□□□□□ -1.68
RIA1	YNL163C	SAF1	P38352	637 aa		4.59	□□□□□ -1.68
RIA1	YNL163C	MSC7	P38694	644 aa		4.59	□□□□□ -1.68
RIA1	YNL163C	ERG5	P54781	538 aa		4.59	□□□□□ -1.68
RIA1	YNL163C	RTP1	Q12751	981 aa		4.59	□□□□□ -1.68
RIA1	YNL163C	BCS1	P32839	456 aa		4.58	□□□□□ -1.68
RIA1	YNL163C	RER2	P35196	286 aa		4.58	□□□□□ -1.68
RIA1	YNL163C	YBR062C	P38239	180 aa		4.58	□□□□□ -1.68
RIA1	YNL163C	FZO1	P38297	855 aa		4.58	□□□□□ -1.68
RIA1	YNL163C	VPS29	P38759	282 aa		4.58	□□□□□ -1.68
RIA1	YNL163C	RRP8	P38961	392 aa	Known RBP	4.58	□□□□□ -1.68
RIA1	YNL163C	CMS1	Q07897	291 aa	Known RBP	4.58	□□□□□ -1.68
RIA1	YNL163C	SEC14	P24280	304 aa	Known RBP	4.58	□□□□□ -1.68
RIA1	YNL163C	SWI4	P25302	1093 aa	Known RBP	4.58	□□□□□ -1.68
RIA1	YNL163C	OLA1	P38219	394 aa	Known RBP	4.58	□□□□□ -1.68
RIA1	YNL163C	STB5	P38699	743 aa		4.58	□□□□□ -1.68
RIA1	YNL163C	CTM1	P38818	585 aa		4.58	□□□□□ -1.68
RIA1	YNL163C	UBP6	P43593	499 aa	Known RBP	4.58	□□□□□ -1.68
RIA1	YNL163C	ADA2	Q02336	434 aa		4.58	□□□□□ -1.68
RIA1	YNL163C	SMC6	Q12749	1114 aa		4.58	□□□□□ -1.68
RIA1	YNL163C	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
RIA1	YNL163C	PDB1	P32473	366 aa	Known RBP	4.57	□□□□□ -1.68
RIA1	YNL163C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
RIA1	YNL163C	UBP14	P38237	781 aa	Known RBP	4.57	□□□□□ -1.68
RIA1	YNL163C	MIP6	P38760	659 aa	Known RBP	4.57	□□□□□ -1.68
RIA1	YNL163C	MRX1	P40050	688 aa		4.57	□□□□□ -1.68
RIA1	YNL163C	DAS1	P47005	663 aa		4.57	□□□□□ -1.68
RIA1	YNL163C	YNR014W	P53719	212 aa		4.57	□□□□□ -1.68
RIA1	YNL163C	SEC39	Q12745	709 aa		4.57	□□□□□ -1.68
RIA1	YNL163C	KAR3	P17119	729 aa		4.57	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 86.3 ms