RNA–Protein interactions for RNA: YMR013C

SEC59, Transcript of Dolichol kinase, yeast

Gene SEC59, Length 1,560 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC59	YMR013C	SOK2	P53438	785 aa	Predicted RBP	4.65	□□□□□ -1.67
SEC59	YMR013C	DUS3	Q06053	668 aa	Known RBP	4.65	□□□□□ -1.67
SEC59	YMR013C	FAP7	Q12055	197 aa	Predicted RBP	4.65	□□□□□ -1.67
SEC59	YMR013C	YDR215C	Q12240	137 aa		4.65	□□□□□ -1.67
SEC59	YMR013C	PPH3	P32345	308 aa		4.64	□□□□□ -1.67
SEC59	YMR013C	YAR028W	P39548	234 aa		4.64	□□□□□ -1.67
SEC59	YMR013C	SLN1	P39928	1220 aa	Predicted RBP	4.64	□□□□□ -1.67
SEC59	YMR013C	LEM3	P42838	414 aa		4.64	□□□□□ -1.67
SEC59	YMR013C	SPO71	Q03868	1245 aa		4.64	□□□□□ -1.67
SEC59	YMR013C	ALG2	P43636	503 aa		4.63	□□□□□ -1.67
SEC59	YMR013C	LAP2	Q10740	671 aa		4.63	□□□□□ -1.67
SEC59	YMR013C	ALG6	Q12001	544 aa	Known RBP	4.63	□□□□□ -1.67
SEC59	YMR013C	SLX4	Q12098	748 aa		4.63	□□□□□ -1.67
SEC59	YMR013C	TMA7	Q3E764	64 aa	Known RBP	4.63	□□□□□ -1.67
SEC59	YMR013C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.62	□□□□□ -1.67	not detected
SEC59	YMR013C	YER152C	P10356	443 aa		4.62	□□□□□ -1.67
SEC59	YMR013C	NFS1	P25374	497 aa		4.62	□□□□□ -1.67
SEC59	YMR013C	BAP2	P38084	609 aa		4.62	□□□□□ -1.67
SEC59	YMR013C	SAH1	P39954	449 aa	Known RBP	4.62	□□□□□ -1.67
SEC59	YMR013C	YOR378W	Q08902	515 aa		4.62	□□□□□ -1.67
SEC59	YMR013C	SCT1	P32784	759 aa		4.61	□□□□□ -1.67
SEC59	YMR013C	TYS1	P36421	394 aa	Known RBP	4.61	□□□□□ -1.67
SEC59	YMR013C	YRO2	P38079	344 aa		4.61	□□□□□ -1.67
SEC59	YMR013C	ERT1	P38140	529 aa		4.61	□□□□□ -1.67
SEC59	YMR013C	ALG14	P38242	237 aa		4.61	□□□□□ -1.67
SEC59	YMR013C	PNT1	P38969	423 aa		4.61	□□□□□ -1.67
SEC59	YMR013C	SIT1	P39980	628 aa		4.61	□□□□□ -1.67
SEC59	YMR013C	VPS53	P47061	822 aa		4.61	□□□□□ -1.67
SEC59	YMR013C	COG6	P53959	839 aa		4.61	□□□□□ -1.67
SEC59	YMR013C	SND1	Q04007	877 aa		4.61	□□□□□ -1.67
SEC59	YMR013C	YMR074C	Q04773	145 aa		4.61	□□□□□ -1.67
SEC59	YMR013C	AVO1	Q08236	1176 aa		4.61	□□□□□ -1.67
SEC59	YMR013C	CDC9	P04819	755 aa		4.61	□□□□□ -1.67
SEC59	YMR013C	SRD1	P09007	221 aa		4.61	□□□□□ -1.67
SEC59	YMR013C	RPL11A	P0C0W9	174 aa	Known RBP	4.61	□□□□□ -1.67
SEC59	YMR013C	RAD18	P10862	487 aa		4.61	□□□□□ -1.67
SEC59	YMR013C	PGM2	P37012	569 aa	Known RBP	4.61	□□□□□ -1.67
SEC59	YMR013C	TAT1	P38085	619 aa		4.61	□□□□□ -1.67
SEC59	YMR013C	GIP2	P40036	548 aa		4.61	□□□□□ -1.67
SEC59	YMR013C	MGS1	P40151	587 aa		4.61	□□□□□ -1.67
SEC59	YMR013C	GPP1	P41277	250 aa	Known RBP	4.61	□□□□□ -1.67
SEC59	YMR013C	YGR045C	P53229	120 aa		4.61	□□□□□ -1.67
SEC59	YMR013C	LCD1	Q04377	747 aa		4.61	□□□□□ -1.67
SEC59	YMR013C	MCA1	Q08601	432 aa		4.61	□□□□□ -1.67
SEC59	YMR013C	YPL260W	Q08977	551 aa		4.61	□□□□□ -1.67
SEC59	YMR013C	SPO21	Q12411	609 aa		4.61	□□□□□ -1.67
SEC59	YMR013C	RPL11B	Q3E757	174 aa	Predicted RBP	4.61	□□□□□ -1.67
SEC59	YMR013C	ADE8	P04161	214 aa		4.6	□□□□□ -1.67
SEC59	YMR013C	KAR1	P11927	433 aa		4.6	□□□□□ -1.67
SEC59	YMR013C	DBP2	P24783	546 aa	Known RBP	4.6	□□□□□ -1.67
SEC59	YMR013C	EUG1	P32474	517 aa		4.6	□□□□□ -1.67
SEC59	YMR013C	SPC29	P33419	253 aa		4.6	□□□□□ -1.67
SEC59	YMR013C	YBR071W	P38243	211 aa		4.6	□□□□□ -1.67
SEC59	YMR013C	HSE1	P38753	452 aa		4.6	□□□□□ -1.67
SEC59	YMR013C	QNS1	P38795	714 aa	Known RBP	4.6	□□□□□ -1.67
SEC59	YMR013C	POL5	P39985	1022 aa	Known RBP	4.6	□□□□□ -1.67
SEC59	YMR013C	TED1	P40533	473 aa		4.6	□□□□□ -1.67
SEC59	YMR013C	DAS1	P47005	663 aa		4.6	□□□□□ -1.67
SEC59	YMR013C	PRY1	P47032	299 aa		4.6	□□□□□ -1.67
SEC59	YMR013C	ELA1	P53861	379 aa	Predicted RBP	4.6	□□□□□ -1.67
SEC59	YMR013C	BUL2	Q03758	920 aa	Known RBP	4.6	□□□□□ -1.67
SEC59	YMR013C	ECM16	Q04217	1267 aa	Known RBP	4.6	□□□□□ -1.67
SEC59	YMR013C	NHA1	Q99271	985 aa		4.6	□□□□□ -1.67
SEC59	YMR013C	ERS1	P17261	260 aa		4.59	□□□□□ -1.67
SEC59	YMR013C	RET1	P22276	1149 aa	Known RBP	4.59	□□□□□ -1.67
SEC59	YMR013C	PWP2	P25635	923 aa	Known RBP	4.59	□□□□□ -1.67
SEC59	YMR013C	KIP1	P28742	1111 aa		4.59	□□□□□ -1.67
SEC59	YMR013C	AFR1	P33304	620 aa		4.59	□□□□□ -1.67
SEC59	YMR013C	VPS24	P36095	224 aa	Known RBP	4.59	□□□□□ -1.67
SEC59	YMR013C	FUI1	P38196	639 aa		4.59	□□□□□ -1.67
SEC59	YMR013C	GPB2	P39717	880 aa		4.59	□□□□□ -1.67
SEC59	YMR013C	MXR1	P40029	184 aa		4.59	□□□□□ -1.67
SEC59	YMR013C	TOK1	P40310	691 aa		4.59	□□□□□ -1.67
SEC59	YMR013C	MET13	P53128	600 aa		4.59	□□□□□ -1.67
SEC59	YMR013C	MTQ2	Q03920	221 aa	Predicted RBP	4.59	□□□□□ -1.67
SEC59	YMR013C	HFD1	Q04458	532 aa		4.59	□□□□□ -1.67
SEC59	YMR013C	RSA3	Q05942	220 aa	Known RBP	4.59	□□□□□ -1.67
SEC59	YMR013C	ELG1	Q12050	791 aa		4.59	□□□□□ -1.67
SEC59	YMR013C	YLL054C	Q12244	843 aa		4.59	□□□□□ -1.67
SEC59	YMR013C	NYV1	Q12255	253 aa		4.59	□□□□□ -1.67
SEC59	YMR013C	PCL2	P25693	308 aa		4.58	□□□□□ -1.68
SEC59	YMR013C	CDC12	P32468	407 aa	Known RBP	4.58	□□□□□ -1.68
SEC59	YMR013C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
SEC59	YMR013C	GYP8	P43570	497 aa		4.58	□□□□□ -1.68
SEC59	YMR013C	PEX14	P53112	341 aa		4.58	□□□□□ -1.68
SEC59	YMR013C	SRP1	Q02821	542 aa	Known RBP	4.58	□□□□□ -1.68
SEC59	YMR013C	TRE2	Q08693	809 aa		4.58	□□□□□ -1.68
SEC59	YMR013C	SAC7	P17121	654 aa		4.57	□□□□□ -1.68
SEC59	YMR013C	SFL1	P20134	766 aa		4.57	□□□□□ -1.68
SEC59	YMR013C	NAR1	P23503	491 aa	Known RBP	4.57	□□□□□ -1.68
SEC59	YMR013C	NPP1	P25353	742 aa		4.57	□□□□□ -1.68
SEC59	YMR013C	HIR1	P32479	840 aa		4.57	□□□□□ -1.68
SEC59	YMR013C	TGL2	P54857	326 aa		4.57	□□□□□ -1.68
SEC59	YMR013C	GIS4	Q04233	774 aa		4.57	□□□□□ -1.68
SEC59	YMR013C	SLP1	Q12232	587 aa		4.57	□□□□□ -1.68
SEC59	YMR013C	MPD2	Q99316	277 aa		4.57	□□□□□ -1.68
SEC59	YMR013C	THS1	P04801	734 aa	Known RBP	4.57	□□□□□ -1.68
SEC59	YMR013C	ATP4	P05626	244 aa		4.57	□□□□□ -1.68
SEC59	YMR013C	YEF3	P16521	1044 aa	Known RBP	4.57	□□□□□ -1.68
SEC59	YMR013C	TRX2	P22803	104 aa	Known RBP	4.57	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 34.9 ms