RNA–Protein interactions for RNA: YLR313C

SPH1, Transcript of Protein involved in shmoo formation and bipolar bud site selection, yeast

Gene SPH1, Length 1,593 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPH1	YLR313C	OYE3	P41816	400 aa	Predicted RBP	4.91	□□□□□ -1.62
SPH1	YLR313C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
SPH1	YLR313C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
SPH1	YLR313C	DUS3	Q06053	668 aa	Known RBP	4.91	□□□□□ -1.62
SPH1	YLR313C	YOR059C	Q08448	450 aa	Known RBP	4.91	□□□□□ -1.62
SPH1	YLR313C	COQ4	O13525	335 aa		4.9	□□□□□ -1.63
SPH1	YLR313C	PHO8	P11491	566 aa		4.9	□□□□□ -1.63
SPH1	YLR313C	CHS2	P14180	963 aa		4.9	□□□□□ -1.63
SPH1	YLR313C	UGA2	P38067	497 aa		4.9	□□□□□ -1.63
SPH1	YLR313C	RCM1	P53972	490 aa		4.9	□□□□□ -1.63
SPH1	YLR313C	DOS2	P54858	310 aa		4.9	□□□□□ -1.63
SPH1	YLR313C	HBN1	Q96VH4	193 aa		4.9	□□□□□ -1.63
SPH1	YLR313C	TOP3	P13099	656 aa		4.89	□□□□□ -1.63
SPH1	YLR313C	YKL151C	P36059	337 aa		4.89	□□□□□ -1.63
SPH1	YLR313C	YBR284W	P38150	797 aa		4.89	□□□□□ -1.63
SPH1	YLR313C	BRN1	P38170	754 aa		4.89	□□□□□ -1.63
SPH1	YLR313C	GEM1	P39722	662 aa		4.89	□□□□□ -1.63
SPH1	YLR313C	HRQ1	Q05549	1077 aa		4.89	□□□□□ -1.63
SPH1	YLR313C	YDL124W	Q07551	312 aa	Known RBP	4.89	□□□□□ -1.63
SPH1	YLR313C	YLR125W	Q12138	136 aa		4.89	□□□□□ -1.63
SPH1	YLR313C	BI4	P03879	638 aa		4.88	□□□□□ -1.63
SPH1	YLR313C	SRO9	P25567	434 aa	Known RBP	4.88	□□□□□ -1.63
SPH1	YLR313C	AAR2	P32357	355 aa	Predicted RBP	4.88	□□□□□ -1.63
SPH1	YLR313C	CDC12	P32468	407 aa	Known RBP	4.88	□□□□□ -1.63
SPH1	YLR313C	CCZ1	P38273	704 aa		4.88	□□□□□ -1.63
SPH1	YLR313C	PIK1	P39104	1066 aa		4.88	□□□□□ -1.63
SPH1	YLR313C	PEX7	P39108	375 aa		4.88	□□□□□ -1.63
SPH1	YLR313C	SIT1	P39980	628 aa		4.88	□□□□□ -1.63
SPH1	YLR313C	TPO2	P53283	614 aa		4.88	□□□□□ -1.63
SPH1	YLR313C	MET6	P05694	767 aa	Known RBP	4.87	□□□□□ -1.63
SPH1	YLR313C	MSB1	P21339	1137 aa	Known RBP	4.87	□□□□□ -1.63
SPH1	YLR313C	PRO1	P32264	428 aa		4.87	□□□□□ -1.63
SPH1	YLR313C	PPH3	P32345	308 aa		4.87	□□□□□ -1.63
SPH1	YLR313C	AFR1	P33304	620 aa		4.87	□□□□□ -1.63
SPH1	YLR313C	MDL2	P33311	773 aa		4.87	□□□□□ -1.63
SPH1	YLR313C	TRE1	Q08919	783 aa		4.87	□□□□□ -1.63
SPH1	YLR313C	CDC11	P32458	415 aa		4.87	□□□□□ -1.63
SPH1	YLR313C	ERT1	P38140	529 aa		4.87	□□□□□ -1.63
SPH1	YLR313C	YGR130C	P53278	816 aa		4.87	□□□□□ -1.63
SPH1	YLR313C	BUL2	Q03758	920 aa	Known RBP	4.87	□□□□□ -1.63
SPH1	YLR313C	RSC58	Q07979	502 aa		4.87	□□□□□ -1.63
SPH1	YLR313C	GCD1	P09032	578 aa	Predicted RBP	4.86	□□□□□ -1.63
SPH1	YLR313C	MSD1	P15179	658 aa	Known RBP	4.86	□□□□□ -1.63
SPH1	YLR313C	THI4	P32318	326 aa		4.86	□□□□□ -1.63
SPH1	YLR313C	KAE1	P36132	386 aa		4.86	□□□□□ -1.63
SPH1	YLR313C	SAH1	P39954	449 aa	Known RBP	4.86	□□□□□ -1.63
SPH1	YLR313C	SRP1	Q02821	542 aa	Known RBP	4.86	□□□□□ -1.63
SPH1	YLR313C	YPR071W	Q12346	211 aa		4.86	□□□□□ -1.63
SPH1	YLR313C	NPP1	P25353	742 aa		4.85	□□□□□ -1.63
SPH1	YLR313C	PET10	P36139	283 aa		4.85	□□□□□ -1.63
SPH1	YLR313C	PTC7	P38797	343 aa		4.85	□□□□□ -1.63
SPH1	YLR313C	MTC3	P53077	123 aa		4.85	□□□□□ -1.63
SPH1	YLR313C	NBA1	Q08229	501 aa	Known RBP	4.85	□□□□□ -1.63
SPH1	YLR313C	THS1	P04801	734 aa	Known RBP	4.84	□□□□□ -1.63
SPH1	YLR313C	TOM70	P07213	617 aa	Known RBP	4.84	□□□□□ -1.63
SPH1	YLR313C	YRO2	P38079	344 aa		4.84	□□□□□ -1.63
SPH1	YLR313C	NPP2	P39997	493 aa		4.84	□□□□□ -1.63
SPH1	YLR313C	GTS1	P40956	396 aa		4.84	□□□□□ -1.63
SPH1	YLR313C	UBP6	P43593	499 aa	Known RBP	4.84	□□□□□ -1.63
SPH1	YLR313C	MAL11	P53048	616 aa		4.84	□□□□□ -1.63
SPH1	YLR313C	MDM38	Q08179	573 aa		4.84	□□□□□ -1.63
SPH1	YLR313C	YLL058W	Q12198	575 aa		4.84	□□□□□ -1.63
SPH1	YLR313C	ACE2	P21192	770 aa		4.83	□□□□□ -1.64
SPH1	YLR313C	AIM26	P32858	118 aa		4.83	□□□□□ -1.64
SPH1	YLR313C	MNN1	P39106	762 aa		4.83	□□□□□ -1.64
SPH1	YLR313C	TOK1	P40310	691 aa		4.83	□□□□□ -1.64
SPH1	YLR313C	LCD1	Q04377	747 aa		4.83	□□□□□ -1.64
SPH1	YLR313C	RSB1	Q08417	382 aa		4.83	□□□□□ -1.64
SPH1	YLR313C	CYC7	P00045	113 aa		4.82	□□□□□ -1.64
SPH1	YLR313C	TRP3	P00937	484 aa		4.82	□□□□□ -1.64
SPH1	YLR313C	ADE8	P04161	214 aa		4.82	□□□□□ -1.64
SPH1	YLR313C	TSL1	P38427	1098 aa	Known RBP	4.82	□□□□□ -1.64
SPH1	YLR313C	GIC1	P38785	314 aa		4.82	□□□□□ -1.64
SPH1	YLR313C	FPR3	P38911	411 aa	Known RBP	4.82	□□□□□ -1.64
SPH1	YLR313C	GDH3	P39708	457 aa		4.82	□□□□□ -1.64
SPH1	YLR313C	HSV2	P50079	448 aa	Predicted RBP	4.82	□□□□□ -1.64
SPH1	YLR313C	SRT1	Q03175	343 aa		4.82	□□□□□ -1.64
SPH1	YLR313C	SSY1	Q03770	852 aa		4.82	□□□□□ -1.64
SPH1	YLR313C	POB3	Q04636	552 aa	Known RBP	4.82	□□□□□ -1.64
SPH1	YLR313C	ATG13	Q06628	738 aa		4.82	□□□□□ -1.64
SPH1	YLR313C	SVS1	Q12254	260 aa		4.82	□□□□□ -1.64
SPH1	YLR313C	NSI1	Q12457	570 aa		4.82	□□□□□ -1.64
SPH1	YLR313C	MSH2	P25847	964 aa		4.82	□□□□□ -1.64
SPH1	YLR313C	DOM34	P33309	386 aa		4.82	□□□□□ -1.64
SPH1	YLR313C	YKR073C	P36153	106 aa		4.82	□□□□□ -1.64
SPH1	YLR313C	RRT14	P40470	206 aa		4.82	□□□□□ -1.64
SPH1	YLR313C	SDH1	Q00711	640 aa		4.82	□□□□□ -1.64
SPH1	YLR313C	GLT1	Q12680	2145 aa	Known RBP	4.81	□□□□□ -1.64
SPH1	YLR313C	ABZ1	P37254	787 aa	Predicted RBP	4.81	□□□□□ -1.64
SPH1	YLR313C	GYP7	P48365	746 aa		4.81	□□□□□ -1.64
SPH1	YLR313C	HFM1	P51979	1187 aa		4.81	□□□□□ -1.64
SPH1	YLR313C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.81	□□□□□ -1.64	not detected
SPH1	YLR313C	RIB2	Q12362	591 aa	Known RBP	4.81	□□□□□ -1.64
SPH1	YLR313C	LPX1	Q12405	387 aa	Known RBP	4.81	□□□□□ -1.64
SPH1	YLR313C	SPS1	P08458	490 aa		4.8	□□□□□ -1.64
SPH1	YLR313C	ADP1	P25371	1049 aa		4.8	□□□□□ -1.64
SPH1	YLR313C	FUN30	P31380	1131 aa		4.8	□□□□□ -1.64
SPH1	YLR313C	YER158C	P40095	573 aa		4.8	□□□□□ -1.64
SPH1	YLR313C	XYL2	Q07993	356 aa		4.8	□□□□□ -1.64
SPH1	YLR313C	NTG2	Q08214	380 aa		4.8	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 20.8 ms