RNA–Protein interactions for RNA: YLR221C

RSA3, Transcript of Protein with a likely role in ribosomal maturation, yeast

Gene RSA3, Length 663 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA3	YLR221C	SPO21	Q12411	609 aa		7.41	□□□□□ -1.22
RSA3	YLR221C	KIP1	P28742	1111 aa		7.4	□□□□□ -1.22
RSA3	YLR221C	POL12	P38121	705 aa	Predicted RBP	7.4	□□□□□ -1.22
RSA3	YLR221C	MNN1	P39106	762 aa		7.4	□□□□□ -1.22
RSA3	YLR221C	SIP5	P40210	489 aa	Known RBP	7.4	□□□□□ -1.22
RSA3	YLR221C	MSH4	P40965	878 aa	Predicted RBP	7.4	□□□□□ -1.22
RSA3	YLR221C	YOR059C	Q08448	450 aa	Known RBP	7.4	□□□□□ -1.22
RSA3	YLR221C	ERR1	P0CX10	437 aa		7.39	□□□□□ -1.23
RSA3	YLR221C	ERR2	P0CX11	437 aa		7.39	□□□□□ -1.23
RSA3	YLR221C	RNQ1	P25367	405 aa		7.39	□□□□□ -1.23
RSA3	YLR221C	SEG2	P34250	1132 aa		7.39	□□□□□ -1.23
RSA3	YLR221C	RPS4A	P0CX35	261 aa	Known RBP	7.38	□□□□□ -1.23
RSA3	YLR221C	RPS4B	P0CX36	261 aa	Known RBP	7.38	□□□□□ -1.23
RSA3	YLR221C	YER152C	P10356	443 aa		7.38	□□□□□ -1.23
RSA3	YLR221C	CCC2	P38995	1004 aa		7.38	□□□□□ -1.23
RSA3	YLR221C	RPN3	P40016	523 aa	Known RBP	7.38	□□□□□ -1.23
RSA3	YLR221C	IOC4	Q04213	475 aa		7.38	□□□□□ -1.23
RSA3	YLR221C	YGR161W-C	Q3E744	92 aa		7.38	□□□□□ -1.23
RSA3	YLR221C	PNT1	P38969	423 aa		7.37	□□□□□ -1.23
RSA3	YLR221C	OYE3	P41816	400 aa	Predicted RBP	7.37	□□□□□ -1.23
RSA3	YLR221C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	7.37	□□□□□ -1.23	not detected
RSA3	YLR221C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	7.37	□□□□□ -1.23	not detected
RSA3	YLR221C	YDR306C	Q06640	478 aa		7.37	□□□□□ -1.23
RSA3	YLR221C	DFG16	Q99234	619 aa		7.37	□□□□□ -1.23
RSA3	YLR221C	RPL11A	P0C0W9	174 aa	Known RBP	7.36	□□□□□ -1.23
RSA3	YLR221C	AAR2	P32357	355 aa	Predicted RBP	7.36	□□□□□ -1.23
RSA3	YLR221C	RTA1	P53047	317 aa		7.36	□□□□□ -1.23
RSA3	YLR221C	RPL11B	Q3E757	174 aa	Predicted RBP	7.36	□□□□□ -1.23
RSA3	YLR221C	HBS1	P32769	611 aa	Known RBP	7.35	□□□□□ -1.23
RSA3	YLR221C	GPB2	P39717	880 aa		7.35	□□□□□ -1.23
RSA3	YLR221C	YJL045W	P47052	634 aa		7.35	□□□□□ -1.23
RSA3	YLR221C	ECL1	P48235	211 aa		7.35	□□□□□ -1.23
RSA3	YLR221C	ALT1	P52893	592 aa		7.35	□□□□□ -1.23
RSA3	YLR221C	YGL081W	P53156	320 aa		7.35	□□□□□ -1.23
RSA3	YLR221C	EAR1	Q03212	550 aa		7.35	□□□□□ -1.23
RSA3	YLR221C	TPP1	Q03796	238 aa		7.35	□□□□□ -1.23
RSA3	YLR221C	HBN1	Q96VH4	193 aa		7.35	□□□□□ -1.23
RSA3	YLR221C	MSH2	P25847	964 aa		7.34	□□□□□ -1.23
RSA3	YLR221C	PPH3	P32345	308 aa		7.34	□□□□□ -1.23
RSA3	YLR221C	HSP78	P33416	811 aa		7.34	□□□□□ -1.23
RSA3	YLR221C	BET3	P36149	193 aa		7.34	□□□□□ -1.23
RSA3	YLR221C	GEM1	P39722	662 aa		7.34	□□□□□ -1.23
RSA3	YLR221C	SRP1	Q02821	542 aa	Known RBP	7.34	□□□□□ -1.23
RSA3	YLR221C	HOS3	Q02959	697 aa	Known RBP	7.34	□□□□□ -1.23
RSA3	YLR221C	DUS3	Q06053	668 aa	Known RBP	7.34	□□□□□ -1.23
RSA3	YLR221C	PUS7	Q08647	676 aa	Known RBP	7.34	□□□□□ -1.23
RSA3	YLR221C	UBP5	P39944	805 aa		7.33	□□□□□ -1.24
RSA3	YLR221C	SIT1	P39980	628 aa		7.33	□□□□□ -1.24
RSA3	YLR221C	TNA1	P53322	534 aa		7.33	□□□□□ -1.24
RSA3	YLR221C	ACM1	Q08981	209 aa		7.33	□□□□□ -1.24
RSA3	YLR221C	THS1	P04801	734 aa	Known RBP	7.32	□□□□□ -1.24
RSA3	YLR221C	TOM70	P07213	617 aa	Known RBP	7.32	□□□□□ -1.24
RSA3	YLR221C	COQ4	O13525	335 aa		7.31	□□□□□ -1.24
RSA3	YLR221C	ADE8	P04161	214 aa		7.31	□□□□□ -1.24
RSA3	YLR221C	DBP2	P24783	546 aa	Known RBP	7.31	□□□□□ -1.24
RSA3	YLR221C	YSC84	P32793	468 aa		7.31	□□□□□ -1.24
RSA3	YLR221C	DOM34	P33309	386 aa		7.31	□□□□□ -1.24
RSA3	YLR221C	NMD3	P38861	518 aa	Known RBP	7.31	□□□□□ -1.24
RSA3	YLR221C	MXR1	P40029	184 aa		7.31	□□□□□ -1.24
RSA3	YLR221C	HSV2	P50079	448 aa	Predicted RBP	7.31	□□□□□ -1.24
RSA3	YLR221C	UGO1	Q03327	502 aa		7.31	□□□□□ -1.24
RSA3	YLR221C	NOP14	Q99207	810 aa	Known RBP	7.31	□□□□□ -1.24
RSA3	YLR221C	YJR142W	P47173	342 aa		7.3	□□□□□ -1.24
RSA3	YLR221C	TRE1	Q08919	783 aa		7.3	□□□□□ -1.24
RSA3	YLR221C	YVC1	Q12324	675 aa		7.3	□□□□□ -1.24
RSA3	YLR221C	GAS1	P22146	559 aa	Known RBP	7.29	□□□□□ -1.24
RSA3	YLR221C	ADP1	P25371	1049 aa		7.29	□□□□□ -1.24
RSA3	YLR221C	PET10	P36139	283 aa		7.29	□□□□□ -1.24
RSA3	YLR221C	YBR284W	P38150	797 aa		7.29	□□□□□ -1.24
RSA3	YLR221C	GDH3	P39708	457 aa		7.29	□□□□□ -1.24
RSA3	YLR221C	NIT1	P40447	199 aa		7.29	□□□□□ -1.24
RSA3	YLR221C	UBP6	P43593	499 aa	Known RBP	7.29	□□□□□ -1.24
RSA3	YLR221C	NTG2	Q08214	380 aa		7.29	□□□□□ -1.24
RSA3	YLR221C	PRO1	P32264	428 aa		7.28	□□□□□ -1.24
RSA3	YLR221C	CDC12	P32468	407 aa	Known RBP	7.28	□□□□□ -1.24
RSA3	YLR221C	SLA2	P33338	968 aa		7.28	□□□□□ -1.24
RSA3	YLR221C	CCZ1	P38273	704 aa		7.28	□□□□□ -1.24
RSA3	YLR221C	PRP43	P53131	767 aa	Known RBP	7.28	□□□□□ -1.24
RSA3	YLR221C	SSY1	Q03770	852 aa		7.28	□□□□□ -1.24
RSA3	YLR221C	LCD1	Q04377	747 aa		7.28	□□□□□ -1.24
RSA3	YLR221C	TOP3	P13099	656 aa		7.27	□□□□□ -1.25
RSA3	YLR221C	MSD1	P15179	658 aa	Known RBP	7.27	□□□□□ -1.25
RSA3	YLR221C	TSR4	P25040	408 aa		7.27	□□□□□ -1.25
RSA3	YLR221C	SFP1	P32432	683 aa		7.27	□□□□□ -1.25
RSA3	YLR221C	UGA2	P38067	497 aa		7.27	□□□□□ -1.25
RSA3	YLR221C	YRO2	P38079	344 aa		7.27	□□□□□ -1.25
RSA3	YLR221C	BAP2	P38084	609 aa		7.27	□□□□□ -1.25
RSA3	YLR221C	SAH1	P39954	449 aa	Known RBP	7.27	□□□□□ -1.25
RSA3	YLR221C	YPR071W	Q12346	211 aa		7.27	□□□□□ -1.25
RSA3	YLR221C	SNF5	P18480	905 aa		7.26	□□□□□ -1.25
RSA3	YLR221C	SRM1	P21827	482 aa		7.26	□□□□□ -1.25
RSA3	YLR221C	YHL012W	P38709	493 aa		7.26	□□□□□ -1.25
RSA3	YLR221C	PIK1	P39104	1066 aa		7.26	□□□□□ -1.25
RSA3	YLR221C	PEX7	P39108	375 aa		7.26	□□□□□ -1.25
RSA3	YLR221C	YLL058W	Q12198	575 aa		7.26	□□□□□ -1.25
RSA3	YLR221C	SRO9	P25567	434 aa	Known RBP	7.25	□□□□□ -1.25
RSA3	YLR221C	PEX6	P33760	1030 aa		7.25	□□□□□ -1.25
RSA3	YLR221C	GSY1	P23337	708 aa		7.24	□□□□□ -1.25
RSA3	YLR221C	ALG2	P43636	503 aa		7.24	□□□□□ -1.25
RSA3	YLR221C	CCM1	P48237	864 aa	Predicted RBP	7.24	□□□□□ -1.25

Retrieved 100 of 5,963 RNA–protein pairs in 24.9 ms