RNA–Protein interactions for RNA: YKR043C

SHB17, Transcript of Sedoheptulose bisphosphatase involved in riboneogenesis, yeast

Gene SHB17, Length 816 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHB17	YKR043C	CDC48	P25694	835 aa	Known RBP	11.43	□□□□□ -0.58
SHB17	YKR043C	IRE1	P32361	1115 aa		11.43	□□□□□ -0.58
SHB17	YKR043C	AZR1	P50080	613 aa		11.43	□□□□□ -0.58
SHB17	YKR043C	CBK1	P53894	756 aa		11.43	□□□□□ -0.58
SHB17	YKR043C	FUS2	Q05670	677 aa		11.43	□□□□□ -0.58
SHB17	YKR043C	MMR1	Q06324	491 aa		11.43	□□□□□ -0.58
SHB17	YKR043C	SMY2	P32909	740 aa	Known RBP	11.42	□□□□□ -0.58
SHB17	YKR043C	ADY4	Q05955	493 aa		11.42	□□□□□ -0.58
SHB17	YKR043C	YEL076C-A	P0CX16	216 aa		11.41	□□□□□ -0.58
SHB17	YKR043C	YLR464W	P0CX17	216 aa		11.41	□□□□□ -0.58
SHB17	YKR043C	UBC1	P21734	215 aa	Known RBP	11.41	□□□□□ -0.58
SHB17	YKR043C	POT1	P27796	417 aa	Known RBP RIP-Chip data	11.41	□□□□□ -0.58	not detected
SHB17	YKR043C	AVT3	P36062	692 aa		11.41	□□□□□ -0.58
SHB17	YKR043C	GRS1	P38088	690 aa	Known RBP	11.41	□□□□□ -0.58
SHB17	YKR043C	YEL076C	P39971	216 aa		11.41	□□□□□ -0.58
SHB17	YKR043C	ULP2	P40537	1034 aa	Predicted RBP	11.41	□□□□□ -0.58
SHB17	YKR043C	DAK2	P43550	591 aa		11.41	□□□□□ -0.58
SHB17	YKR043C	UBA2	P52488	636 aa		11.41	□□□□□ -0.58
SHB17	YKR043C	NCR1	Q12200	1170 aa		11.41	□□□□□ -0.58
SHB17	YKR043C	MOT1	P32333	1867 aa		11.4	□□□□□ -0.58
SHB17	YKR043C	DED1	P06634	604 aa	Known RBP	11.4	□□□□□ -0.58
SHB17	YKR043C	FRS2	P15625	503 aa	Known RBP	11.4	□□□□□ -0.58
SHB17	YKR043C	CKA2	P19454	339 aa		11.4	□□□□□ -0.58
SHB17	YKR043C	SIP3	P38717	1229 aa		11.4	□□□□□ -0.58
SHB17	YKR043C	THI6	P41835	540 aa		11.4	□□□□□ -0.58
SHB17	YKR043C	LSP1	Q12230	341 aa	Known RBP	11.4	□□□□□ -0.58
SHB17	YKR043C	HIS4	P00815	799 aa	Known RBP	11.39	□□□□□ -0.59
SHB17	YKR043C	EFT1	P32324	842 aa	Known RBP	11.39	□□□□□ -0.59
SHB17	YKR043C	PET10	P36139	283 aa		11.39	□□□□□ -0.59
SHB17	YKR043C	PIH1	P38768	344 aa		11.39	□□□□□ -0.59
SHB17	YKR043C	TVP23	P38962	199 aa		11.39	□□□□□ -0.59
SHB17	YKR043C	SAD1	P43589	448 aa		11.39	□□□□□ -0.59
SHB17	YKR043C	SGM1	P47166	707 aa		11.39	□□□□□ -0.59
SHB17	YKR043C	CUE3	P53137	624 aa	Known RBP	11.39	□□□□□ -0.59
SHB17	YKR043C	ROD1	Q02805	837 aa		11.39	□□□□□ -0.59
SHB17	YKR043C	PEX19	Q07418	342 aa		11.39	□□□□□ -0.59
SHB17	YKR043C	SMC5	Q08204	1093 aa		11.39	□□□□□ -0.59
SHB17	YKR043C	RFT1	P38206	574 aa	Predicted RBP	11.38	□□□□□ -0.59
SHB17	YKR043C	BDH2	P39713	417 aa		11.38	□□□□□ -0.59
SHB17	YKR043C	ALD5	P40047	520 aa	Known RBP	11.38	□□□□□ -0.59
SHB17	YKR043C	FYV10	P40492	516 aa		11.38	□□□□□ -0.59
SHB17	YKR043C	INP51	P40559	946 aa	Known RBP	11.38	□□□□□ -0.59
SHB17	YKR043C	HST1	P53685	503 aa		11.38	□□□□□ -0.59
SHB17	YKR043C	CUS1	Q02554	436 aa	Predicted RBP	11.38	□□□□□ -0.59
SHB17	YKR043C	COG8	Q04632	607 aa		11.38	□□□□□ -0.59
SHB17	YKR043C	COQ9	Q05779	260 aa		11.38	□□□□□ -0.59
SHB17	YKR043C	FOB1	O13329	566 aa		11.37	□□□□□ -0.59
SHB17	YKR043C	TCP1	P12612	559 aa	Known RBP	11.37	□□□□□ -0.59
SHB17	YKR043C	MSS51	P32335	436 aa		11.37	□□□□□ -0.59
SHB17	YKR043C	GUA1	P38625	525 aa	Known RBP	11.37	□□□□□ -0.59
SHB17	YKR043C	EAF5	P39995	279 aa		11.37	□□□□□ -0.59
SHB17	YKR043C	RPN3	P40016	523 aa	Known RBP	11.37	□□□□□ -0.59
SHB17	YKR043C	NUP82	P40368	713 aa		11.37	□□□□□ -0.59
SHB17	YKR043C	YNL115C	P53925	644 aa		11.37	□□□□□ -0.59
SHB17	YKR043C	ISY1	P21374	235 aa	Predicted RBP	11.36	□□□□□ -0.59
SHB17	YKR043C	HYR1	P40581	163 aa	Known RBP	11.36	□□□□□ -0.59
SHB17	YKR043C	ACF4	P47129	309 aa		11.36	□□□□□ -0.59
SHB17	YKR043C	FOL2	P51601	243 aa	Known RBP	11.36	□□□□□ -0.59
SHB17	YKR043C	NCS2	P53923	493 aa	Predicted RBP	11.36	□□□□□ -0.59
SHB17	YKR043C	HIP1	P06775	603 aa		11.35	□□□□□ -0.59
SHB17	YKR043C	PFK1	P16861	987 aa	Known RBP	11.35	□□□□□ -0.59
SHB17	YKR043C	BMH1	P29311	267 aa	Known RBP	11.35	□□□□□ -0.59
SHB17	YKR043C	GUP1	P53154	560 aa		11.35	□□□□□ -0.59
SHB17	YKR043C	RAM2	P29703	316 aa		11.34	□□□□□ -0.59
SHB17	YKR043C	ATG19	P35193	415 aa		11.34	□□□□□ -0.59
SHB17	YKR043C	DID4	P36108	232 aa		11.34	□□□□□ -0.59
SHB17	YKR043C	PGM2	P37012	569 aa	Known RBP	11.34	□□□□□ -0.59
SHB17	YKR043C	BRL1	P38770	471 aa		11.34	□□□□□ -0.59
SHB17	YKR043C	AVT1	P47082	602 aa		11.34	□□□□□ -0.59
SHB17	YKR043C	ARK1	P53974	638 aa		11.34	□□□□□ -0.59
SHB17	YKR043C	EAR1	Q03212	550 aa		11.34	□□□□□ -0.59
SHB17	YKR043C	NOC3	Q07896	663 aa	Predicted RBP	11.34	□□□□□ -0.59
SHB17	YKR043C	PSR2	Q07949	397 aa		11.34	□□□□□ -0.59
SHB17	YKR043C	HIF1	Q12373	385 aa		11.33	□□□□□ -0.6
SHB17	YKR043C	FUB1	P25659	250 aa		11.32	□□□□□ -0.6
SHB17	YKR043C	HIR1	P32479	840 aa		11.32	□□□□□ -0.6
SHB17	YKR043C	ELM1	P32801	640 aa		11.32	□□□□□ -0.6
SHB17	YKR043C	VPS24	P36095	224 aa	Known RBP	11.32	□□□□□ -0.6
SHB17	YKR043C	POA1	P38218	177 aa		11.32	□□□□□ -0.6
SHB17	YKR043C	ERC1	P38767	581 aa		11.32	□□□□□ -0.6
SHB17	YKR043C	VTC2	P43585	828 aa		11.32	□□□□□ -0.6
SHB17	YKR043C	HFI1	Q12060	488 aa		11.32	□□□□□ -0.6
SHB17	YKR043C	RIF1	P29539	1916 aa		11.32	□□□□□ -0.6
SHB17	YKR043C	TAO3	P40468	2376 aa		11.31	□□□□□ -0.6
SHB17	YKR043C	DBP5	P20449	482 aa	Known RBP	11.31	□□□□□ -0.6
SHB17	YKR043C	CAD1	P24813	409 aa	Known RBP	11.31	□□□□□ -0.6
SHB17	YKR043C	PPS1	P38148	807 aa		11.31	□□□□□ -0.6
SHB17	YKR043C	MSC7	P38694	644 aa		11.31	□□□□□ -0.6
SHB17	YKR043C	YDL057W	Q07379	328 aa		11.31	□□□□□ -0.6
SHB17	YKR043C	CDC15	P27636	974 aa		11.3	□□□□□ -0.6
SHB17	YKR043C	COT1	P32798	439 aa		11.3	□□□□□ -0.6
SHB17	YKR043C	DRE2	P36152	348 aa		11.3	□□□□□ -0.6
SHB17	YKR043C	JJJ3	P47138	172 aa		11.3	□□□□□ -0.6
SHB17	YKR043C	CAF130	P53280	1122 aa	Predicted RBP	11.3	□□□□□ -0.6
SHB17	YKR043C	RTT102	P53330	157 aa		11.3	□□□□□ -0.6
SHB17	YKR043C	SEC5	P89102	971 aa		11.3	□□□□□ -0.6
SHB17	YKR043C	MUK1	Q02866	612 aa		11.3	□□□□□ -0.6
SHB17	YKR043C	IES4	Q08561	116 aa		11.3	□□□□□ -0.6
SHB17	YKR043C	AHC1	Q12433	566 aa		11.3	□□□□□ -0.6
SHB17	YKR043C	DDP1	Q99321	188 aa	Known RBP	11.3	□□□□□ -0.6

Retrieved 100 of 5,963 RNA–protein pairs in 65.1 ms