RNA–Protein interactions for RNA: YKR017C

HEL1, Transcript of RING finger ubiquitin ligase (E3), yeastyeast

Gene HEL1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HEL1YKR017C JIP3O13555 125 aa7.44□□□□□ -1.22
HEL1YKR017C ATP4P05626 244 aa7.44□□□□□ -1.22
HEL1YKR017C ILS1P09436 1072 aaKnown RBP7.44□□□□□ -1.22
HEL1YKR017C CKA2P19454 339 aa7.44□□□□□ -1.22
HEL1YKR017C YAP1P19880 650 aaKnown RBP7.44□□□□□ -1.22
HEL1YKR017C MRPS28P21771 286 aa7.44□□□□□ -1.22
HEL1YKR017C CPS1P27614 576 aa7.44□□□□□ -1.22
HEL1YKR017C DOM34P33309 386 aa7.44□□□□□ -1.22
HEL1YKR017C PCL7P40186 285 aa7.44□□□□□ -1.22
HEL1YKR017C YIL166CP40445 542 aa7.44□□□□□ -1.22
HEL1YKR017C VPS70P47161 811 aa7.44□□□□□ -1.22
HEL1YKR017C UBP15P50101 1230 aa7.44□□□□□ -1.22
HEL1YKR017C RAT1Q02792 1006 aaKnown RBP7.44□□□□□ -1.22
HEL1YKR017C UTP14Q04500 899 aaKnown RBP7.44□□□□□ -1.22
HEL1YKR017C SML1Q04964 104 aa7.44□□□□□ -1.22
HEL1YKR017C TRM8Q12009 286 aa7.44□□□□□ -1.22
HEL1YKR017C STF1P01098 86 aa7.43□□□□□ -1.22
HEL1YKR017C HIS3P06633 220 aa7.43□□□□□ -1.22
HEL1YKR017C MGM1P32266 881 aa7.43□□□□□ -1.22
HEL1YKR017C YKL222CP35995 705 aa7.43□□□□□ -1.22
HEL1YKR017C YKL023WP36103 277 aaKnown RBP7.43□□□□□ -1.22
HEL1YKR017C VPS51P36116 164 aa7.43□□□□□ -1.22
HEL1YKR017C MBP1P39678 833 aa7.43□□□□□ -1.22
HEL1YKR017C YFL066CP43538 392 aa7.43□□□□□ -1.22
HEL1YKR017C ROK1P45818 564 aaPredicted RBP7.43□□□□□ -1.22
HEL1YKR017C MDV1P47025 714 aa7.43□□□□□ -1.22
HEL1YKR017C RSM7P47150 247 aa7.43□□□□□ -1.22
HEL1YKR017C LYS4P49367 693 aaPredicted RBP7.43□□□□□ -1.22
HEL1YKR017C NIS1P53939 407 aa7.43□□□□□ -1.22
HEL1YKR017C HOS3Q02959 697 aaKnown RBP7.43□□□□□ -1.22
HEL1YKR017C ESC2Q06340 456 aa7.43□□□□□ -1.22
HEL1YKR017C OSH2Q12451 1283 aa7.43□□□□□ -1.22
HEL1YKR017C ADF1Q2V2Q1 113 aa7.43□□□□□ -1.22
HEL1YKR017C GFD2P25370 566 aaKnown RBP7.42□□□□□ -1.22
HEL1YKR017C RPC53P25441 422 aa7.42□□□□□ -1.22
HEL1YKR017C MEI4P29467 408 aa7.42□□□□□ -1.22
HEL1YKR017C SSH4P32343 579 aa7.42□□□□□ -1.22
HEL1YKR017C SRB4P32569 687 aa7.42□□□□□ -1.22
HEL1YKR017C CNS1P33313 385 aa7.42□□□□□ -1.22
HEL1YKR017C YKL063CP35725 167 aa7.42□□□□□ -1.22
HEL1YKR017C YKT6P36015 200 aaKnown RBP7.42□□□□□ -1.22
HEL1YKR017C ALA1P40825 983 aaKnown RBP7.42□□□□□ -1.22
HEL1YKR017C SBE2P42223 864 aaKnown RBP7.42□□□□□ -1.22
HEL1YKR017C ALT1P52893 592 aa7.42□□□□□ -1.22
HEL1YKR017C ASI1P54074 624 aa7.42□□□□□ -1.22
HEL1YKR017C NSE5Q03718 556 aa7.42□□□□□ -1.22
HEL1YKR017C YKU80Q04437 629 aa7.42□□□□□ -1.22
HEL1YKR017C SPN1Q06505 410 aaPredicted RBP7.42□□□□□ -1.22
HEL1YKR017C OPY2Q06810 360 aa7.42□□□□□ -1.22
HEL1YKR017C RPO31P04051 1460 aa7.42□□□□□ -1.22
HEL1YKR017C HOM2P13663 365 aaKnown RBP7.41□□□□□ -1.22
HEL1YKR017C KNS1P32350 737 aaPredicted RBP7.41□□□□□ -1.22
HEL1YKR017C SSE1P32589 693 aaKnown RBP7.41□□□□□ -1.22
HEL1YKR017C SLA2P33338 968 aa7.41□□□□□ -1.22
HEL1YKR017C TFC4P33339 1025 aa7.41□□□□□ -1.22
HEL1YKR017C HSP78P33416 811 aa7.41□□□□□ -1.22
HEL1YKR017C YHR219WP38900 624 aa7.41□□□□□ -1.22
HEL1YKR017C TIF4631P39935 952 aaKnown RBP7.41□□□□□ -1.22
HEL1YKR017C SGM1P47166 707 aa7.41□□□□□ -1.22
HEL1YKR017C LSB1P53281 241 aa7.41□□□□□ -1.22
HEL1YKR017C RPM2Q02773 1202 aa7.41□□□□□ -1.22
HEL1YKR017C TAF8Q03750 510 aa7.41□□□□□ -1.22
HEL1YKR017C BUL2Q03758 920 aaKnown RBP7.41□□□□□ -1.22
HEL1YKR017C YDL144CQ07589 356 aa7.41□□□□□ -1.22
HEL1YKR017C ADY3Q07732 790 aa7.41□□□□□ -1.22
HEL1YKR017C MPD2Q99316 277 aa7.41□□□□□ -1.22
HEL1YKR017C SUI3P09064 285 aaKnown RBP7.41□□□□□ -1.22
HEL1YKR017C DSF1P0CX08 502 aa7.41□□□□□ -1.22
HEL1YKR017C YNR073CP0CX09 502 aa7.41□□□□□ -1.22
HEL1YKR017C FUS1P11710 512 aa7.41□□□□□ -1.22
HEL1YKR017C KAR2P16474 682 aaKnown RBP7.41□□□□□ -1.22
HEL1YKR017C HSP60P19882 572 aaKnown RBP7.41□□□□□ -1.22
HEL1YKR017C RPC34P32910 317 aa7.41□□□□□ -1.22
HEL1YKR017C CUE2P36075 443 aaKnown RBP7.41□□□□□ -1.22
HEL1YKR017C ATP3P38077 311 aaKnown RBP7.41□□□□□ -1.22
HEL1YKR017C PEX32P38292 413 aa7.41□□□□□ -1.22
HEL1YKR017C YBR242WP38331 238 aa7.41□□□□□ -1.22
HEL1YKR017C VAC8P39968 578 aa7.41□□□□□ -1.22
HEL1YKR017C INA22P40576 216 aa7.41□□□□□ -1.22
HEL1YKR017C RLP7P40693 322 aaKnown RBP7.41□□□□□ -1.22
HEL1YKR017C STU2P46675 888 aa7.41□□□□□ -1.22
HEL1YKR017C RET3P53600 189 aa7.41□□□□□ -1.22
HEL1YKR017C YNL193WP53870 558 aa7.41□□□□□ -1.22
HEL1YKR017C YNL035CP53962 389 aaKnown RBP7.41□□□□□ -1.22
HEL1YKR017C GCR2Q01722 534 aa7.41□□□□□ -1.22
HEL1YKR017C PLP1Q04004 230 aa7.41□□□□□ -1.22
HEL1YKR017C ARP9Q05123 467 aa7.41□□□□□ -1.22
HEL1YKR017C YDL124WQ07551 312 aaKnown RBP7.41□□□□□ -1.22
HEL1YKR017C NEW1Q08972 1196 aaKnown RBP7.41□□□□□ -1.22
HEL1YKR017C APC11Q12157 165 aa7.41□□□□□ -1.22
HEL1YKR017C ARG81P05085 880 aa7.4□□□□□ -1.23
HEL1YKR017C TRX1P22217 103 aaKnown RBP7.4□□□□□ -1.23
HEL1YKR017C DPH2P32461 534 aa7.4□□□□□ -1.23
HEL1YKR017C STV1P37296 890 aa7.4□□□□□ -1.23
HEL1YKR017C PBP2P38151 413 aaKnown RBP RIP-Chip data7.4□□□□□ -1.23not detected
HEL1YKR017C RTC3P38804 111 aaPredicted RBP7.4□□□□□ -1.23
HEL1YKR017C GEM1P39722 662 aa7.4□□□□□ -1.23
HEL1YKR017C BIM1P40013 344 aa7.4□□□□□ -1.23
HEL1YKR017C ZRG8P40021 1076 aa7.4□□□□□ -1.23
HEL1YKR017C HUL4P40985 892 aa7.4□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 67 ms