RNA–Protein interactions for RNA: YKL184W

SPE1, Transcript of Ornithine decarboxylase, yeast

Gene SPE1, Length 1,401 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPE1	YKL184W	ESC8	Q08119	714 aa		4.05	□□□□□ -1.76
SPE1	YKL184W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.05	□□□□□ -1.76	not detected
SPE1	YKL184W	BI4	P03879	638 aa		4.04	□□□□□ -1.76
SPE1	YKL184W	ACE2	P21192	770 aa		4.04	□□□□□ -1.76
SPE1	YKL184W	DBP2	P24783	546 aa	Known RBP	4.04	□□□□□ -1.76
SPE1	YKL184W	THI80	P35202	319 aa		4.04	□□□□□ -1.76
SPE1	YKL184W	VPS16	Q03308	798 aa		4.04	□□□□□ -1.76
SPE1	YKL184W	GCN5	Q03330	439 aa		4.04	□□□□□ -1.76
SPE1	YKL184W	RXT3	Q07458	294 aa		4.04	□□□□□ -1.76
SPE1	YKL184W	GAL10	P04397	699 aa		4.04	□□□□□ -1.76
SPE1	YKL184W	SLA2	P33338	968 aa		4.04	□□□□□ -1.76
SPE1	YKL184W	ABZ1	P37254	787 aa	Predicted RBP	4.04	□□□□□ -1.76
SPE1	YKL184W	SRP1	Q02821	542 aa	Known RBP	4.04	□□□□□ -1.76
SPE1	YKL184W	OSW2	Q12202	724 aa		4.04	□□□□□ -1.76
SPE1	YKL184W	AGP1	P25376	633 aa		4.03	□□□□□ -1.76
SPE1	YKL184W	SBA1	P28707	216 aa	Known RBP	4.03	□□□□□ -1.76
SPE1	YKL184W	ABD1	P32783	436 aa	Predicted RBP	4.03	□□□□□ -1.76
SPE1	YKL184W	YPL066W	Q12194	479 aa		4.03	□□□□□ -1.76
SPE1	YKL184W	RPP2A	P05319	106 aa	Known RBP	4.02	□□□□□ -1.77
SPE1	YKL184W	YCR015C	P25616	317 aa		4.02	□□□□□ -1.77
SPE1	YKL184W	SCT1	P32784	759 aa		4.02	□□□□□ -1.77
SPE1	YKL184W	VAC8	P39968	578 aa		4.02	□□□□□ -1.77
SPE1	YKL184W	GTF1	P53260	183 aa	Predicted RBP	4.02	□□□□□ -1.77
SPE1	YKL184W	MSC2	Q03455	724 aa		4.02	□□□□□ -1.77
SPE1	YKL184W	SIZ1	Q04195	904 aa		4.02	□□□□□ -1.77
SPE1	YKL184W	OPI10	Q08202	246 aa		4.02	□□□□□ -1.77
SPE1	YKL184W	ENA1	P13587	1091 aa		4.01	□□□□□ -1.77
SPE1	YKL184W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.01	□□□□□ -1.77	not detected
SPE1	YKL184W	DOM34	P33309	386 aa		4.01	□□□□□ -1.77
SPE1	YKL184W	GIP4	P39732	760 aa		4.01	□□□□□ -1.77
SPE1	YKL184W	SAH1	P39954	449 aa	Known RBP	4.01	□□□□□ -1.77
SPE1	YKL184W	SIP5	P40210	489 aa	Known RBP	4.01	□□□□□ -1.77
SPE1	YKL184W	ENA2	Q01896	1091 aa		4.01	□□□□□ -1.77
SPE1	YKL184W	PLB2	Q03674	706 aa		4.01	□□□□□ -1.77
SPE1	YKL184W	YDR132C	Q03900	495 aa		4.01	□□□□□ -1.77
SPE1	YKL184W	GPB1	Q08886	897 aa		4.01	□□□□□ -1.77
SPE1	YKL184W	YLL058W	Q12198	575 aa		4.01	□□□□□ -1.77
SPE1	YKL184W	ENA5	Q12691	1091 aa		4.01	□□□□□ -1.77
SPE1	YKL184W	PRI2	P20457	528 aa		4	□□□□□ -1.77
SPE1	YKL184W	FLR1	P38124	548 aa		4	□□□□□ -1.77
SPE1	YKL184W	ZRG8	P40021	1076 aa		4	□□□□□ -1.77
SPE1	YKL184W	NOP7	P53261	605 aa	Known RBP	4	□□□□□ -1.77
SPE1	YKL184W	TPO2	P53283	614 aa		4	□□□□□ -1.77
SPE1	YKL184W	SHE9	Q04172	456 aa		4	□□□□□ -1.77
SPE1	YKL184W	ESC2	Q06340	456 aa		4	□□□□□ -1.77
SPE1	YKL184W	ACK1	Q07622	623 aa	Predicted RBP	4	□□□□□ -1.77
SPE1	YKL184W	SRM1	P21827	482 aa		3.99	□□□□□ -1.77
SPE1	YKL184W	TAT2	P38967	592 aa		3.99	□□□□□ -1.77
SPE1	YKL184W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	3.99	□□□□□ -1.77	not detected
SPE1	YKL184W	HFM1	P51979	1187 aa		3.99	□□□□□ -1.77
SPE1	YKL184W	ALD6	P54115	500 aa	Known RBP	3.99	□□□□□ -1.77
SPE1	YKL184W	DUS4	Q06063	367 aa		3.99	□□□□□ -1.77
SPE1	YKL184W	MDM38	Q08179	573 aa		3.99	□□□□□ -1.77
SPE1	YKL184W	WRS1	Q12109	432 aa	Known RBP	3.99	□□□□□ -1.77
SPE1	YKL184W	RIB2	Q12362	591 aa	Known RBP	3.99	□□□□□ -1.77
SPE1	YKL184W	MRP8	P35719	219 aa		3.98	□□□□□ -1.77
SPE1	YKL184W	VBA5	P36172	582 aa		3.98	□□□□□ -1.77
SPE1	YKL184W	POA1	P38218	177 aa		3.98	□□□□□ -1.77
SPE1	YKL184W	MBP1	P39678	833 aa		3.98	□□□□□ -1.77
SPE1	YKL184W	TAF1	P46677	1066 aa		3.98	□□□□□ -1.77
SPE1	YKL184W	PSP2	P50109	593 aa	Known RBP	3.98	□□□□□ -1.77
SPE1	YKL184W	CLU1	Q03690	1277 aa	Known RBP	3.98	□□□□□ -1.77
SPE1	YKL184W	DUS3	Q06053	668 aa	Known RBP	3.98	□□□□□ -1.77
SPE1	YKL184W	PPH3	P32345	308 aa		3.97	□□□□□ -1.77
SPE1	YKL184W	YAP1801	P38856	637 aa		3.97	□□□□□ -1.77
SPE1	YKL184W	MTC3	P53077	123 aa		3.97	□□□□□ -1.77
SPE1	YKL184W	SRT1	Q03175	343 aa		3.97	□□□□□ -1.77
SPE1	YKL184W	ADE8	P04161	214 aa		3.96	□□□□□ -1.77
SPE1	YKL184W	CDC20	P26309	610 aa		3.96	□□□□□ -1.77
SPE1	YKL184W	FUN30	P31380	1131 aa		3.96	□□□□□ -1.77
SPE1	YKL184W	SHM2	P37291	469 aa	Known RBP	3.96	□□□□□ -1.77
SPE1	YKL184W	PAM1	P37304	830 aa	Known RBP	3.96	□□□□□ -1.77
SPE1	YKL184W	PBY1	P38254	753 aa		3.96	□□□□□ -1.77
SPE1	YKL184W	CCC2	P38995	1004 aa		3.96	□□□□□ -1.77
SPE1	YKL184W	IRR1	P40541	1150 aa		3.96	□□□□□ -1.77
SPE1	YKL184W	MND2	P40577	368 aa		3.96	□□□□□ -1.77
SPE1	YKL184W	GCV2	P49095	1034 aa		3.96	□□□□□ -1.77
SPE1	YKL184W	YGR012W	P53206	393 aa		3.96	□□□□□ -1.77
SPE1	YKL184W	HRQ1	Q05549	1077 aa		3.96	□□□□□ -1.77
SPE1	YKL184W	TDA5	Q06417	326 aa	Known RBP	3.96	□□□□□ -1.77
SPE1	YKL184W	URN1	Q06525	465 aa	Known RBP	3.96	□□□□□ -1.77
SPE1	YKL184W	YPR196W	Q06595	470 aa		3.96	□□□□□ -1.77
SPE1	YKL184W	YDR306C	Q06640	478 aa		3.96	□□□□□ -1.77
SPE1	YKL184W	NOP12	Q08208	459 aa	Known RBP	3.96	□□□□□ -1.77
SPE1	YKL184W	EMC1	P25574	760 aa		3.95	□□□□□ -1.78
SPE1	YKL184W	RPC82	P32349	654 aa		3.95	□□□□□ -1.78
SPE1	YKL184W	AAR2	P32357	355 aa	Predicted RBP	3.95	□□□□□ -1.78
SPE1	YKL184W	MNN10	P50108	393 aa	Known RBP	3.95	□□□□□ -1.78
SPE1	YKL184W	TPO1	Q07824	586 aa		3.95	□□□□□ -1.78
SPE1	YKL184W	HSF1	P10961	833 aa		3.95	□□□□□ -1.78
SPE1	YKL184W	PRP9	P19736	530 aa	Known RBP	3.95	□□□□□ -1.78
SPE1	YKL184W	STE11	P23561	717 aa		3.95	□□□□□ -1.78
SPE1	YKL184W	ATG19	P35193	415 aa		3.95	□□□□□ -1.78
SPE1	YKL184W	YKL151C	P36059	337 aa		3.95	□□□□□ -1.78
SPE1	YKL184W	ECM21	P38167	1117 aa	Known RBP	3.95	□□□□□ -1.78
SPE1	YKL184W	MET12	P46151	657 aa		3.95	□□□□□ -1.78
SPE1	YKL184W	MCM6	P53091	1017 aa	Known RBP	3.95	□□□□□ -1.78
SPE1	YKL184W	VPS62	P53285	467 aa		3.95	□□□□□ -1.78
SPE1	YKL184W	YAP6	Q03935	383 aa		3.95	□□□□□ -1.78
SPE1	YKL184W	XYL2	Q07993	356 aa		3.95	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms