RNA–Protein interactions for RNA: YKL112W

ABF1, Transcript of DNA binding protein with possible chromatin-reorganizing activity, yeastyeast

Gene ABF1, Length 2,196 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABF1YKL112W NDE1P40215 560 aa5.13□□□□□ -1.59
ABF1YKL112W DSN1P40568 576 aa5.13□□□□□ -1.59
ABF1YKL112W MDM38Q08179 573 aa5.13□□□□□ -1.59
ABF1YKL112W PIF1P07271 859 aa5.12□□□□□ -1.59
ABF1YKL112W ERG12P07277 443 aa5.12□□□□□ -1.59
ABF1YKL112W PMS1P14242 873 aa5.12□□□□□ -1.59
ABF1YKL112W FAR1P21268 830 aa5.12□□□□□ -1.59
ABF1YKL112W DAL80P26343 269 aa5.12□□□□□ -1.59
ABF1YKL112W HIR2P32480 875 aa5.12□□□□□ -1.59
ABF1YKL112W STN1P38960 494 aa5.12□□□□□ -1.59
ABF1YKL112W FIR1P40020 876 aa5.12□□□□□ -1.59
ABF1YKL112W BUB1P41695 1021 aaKnown RBP RIP-Chip data5.12□□□□□ -1.59not detected
ABF1YKL112W PXA1P41909 870 aa5.12□□□□□ -1.59
ABF1YKL112W SHE10P53075 577 aa5.12□□□□□ -1.59
ABF1YKL112W RSM28Q03430 361 aa5.12□□□□□ -1.59
ABF1YKL112W SSQ1Q05931 657 aaPredicted RBP5.12□□□□□ -1.59
ABF1YKL112W GAS5Q08193 484 aa5.12□□□□□ -1.59
ABF1YKL112W ALE1Q08548 619 aa5.12□□□□□ -1.59
ABF1YKL112W PGC1Q08959 321 aa5.12□□□□□ -1.59
ABF1YKL112W MCD1Q12158 566 aa5.12□□□□□ -1.59
ABF1YKL112W YBL111CQ3E7Y5 667 aa5.12□□□□□ -1.59
ABF1YKL112W LEU1P07264 779 aaKnown RBP5.12□□□□□ -1.59
ABF1YKL112W GAL2P13181 574 aa5.12□□□□□ -1.59
ABF1YKL112W CDC60P26637 1090 aaKnown RBP5.12□□□□□ -1.59
ABF1YKL112W TBS1P38114 1094 aa5.12□□□□□ -1.59
ABF1YKL112W SNF7P39929 240 aaKnown RBP5.12□□□□□ -1.59
ABF1YKL112W YFL040WP43562 540 aa5.12□□□□□ -1.59
ABF1YKL112W YJL049WP47048 450 aa5.12□□□□□ -1.59
ABF1YKL112W YGR153WP48238 217 aa5.12□□□□□ -1.59
ABF1YKL112W JIP4Q03361 876 aa5.12□□□□□ -1.59
ABF1YKL112W YML083CQ04526 418 aa5.12□□□□□ -1.59
ABF1YKL112W YOR352WQ08816 343 aa5.12□□□□□ -1.59
ABF1YKL112W SLX4Q12098 748 aa5.12□□□□□ -1.59
ABF1YKL112W PRT1P06103 763 aaKnown RBP5.11□□□□□ -1.59
ABF1YKL112W RED1P14291 827 aa5.11□□□□□ -1.59
ABF1YKL112W DIT1P21623 536 aa5.11□□□□□ -1.59
ABF1YKL112W KRE2P27809 442 aa5.11□□□□□ -1.59
ABF1YKL112W DPH5P32469 300 aaPredicted RBP5.11□□□□□ -1.59
ABF1YKL112W SEC8P32855 1065 aa5.11□□□□□ -1.59
ABF1YKL112W BUD2P33314 1104 aa5.11□□□□□ -1.59
ABF1YKL112W PBP2P38151 413 aaKnown RBP RIP-Chip data5.11□□□□□ -1.59not detected
ABF1YKL112W UTP7P40055 554 aaKnown RBP5.11□□□□□ -1.59
ABF1YKL112W PSF2P40359 213 aa5.11□□□□□ -1.59
ABF1YKL112W VTC2P43585 828 aa5.11□□□□□ -1.59
ABF1YKL112W SRB7P47822 140 aa5.11□□□□□ -1.59
ABF1YKL112W YOR238WQ08634 303 aa5.11□□□□□ -1.59
ABF1YKL112W GAL1P04385 528 aa5.11□□□□□ -1.59
ABF1YKL112W GLK1P17709 500 aaKnown RBP5.11□□□□□ -1.59
ABF1YKL112W MRC1P25588 1096 aa5.11□□□□□ -1.59
ABF1YKL112W LDH1P38139 375 aa5.11□□□□□ -1.59
ABF1YKL112W EXO84P38261 753 aa5.11□□□□□ -1.59
ABF1YKL112W HSM3P38348 480 aa5.11□□□□□ -1.59
ABF1YKL112W CIC1P38779 376 aaKnown RBP5.11□□□□□ -1.59
ABF1YKL112W POP2P39008 433 aa5.11□□□□□ -1.59
ABF1YKL112W LAM5P43560 674 aa5.11□□□□□ -1.59
ABF1YKL112W ENP2P48234 707 aaKnown RBP5.11□□□□□ -1.59
ABF1YKL112W YLR326WQ06170 240 aaKnown RBP5.11□□□□□ -1.59
ABF1YKL112W GIC2Q06648 383 aa5.11□□□□□ -1.59
ABF1YKL112W MDM36Q06820 579 aa5.11□□□□□ -1.59
ABF1YKL112W YDL073WQ07454 984 aa5.11□□□□□ -1.59
ABF1YKL112W FLO11P08640 1367 aa5.1□□□□□ -1.59
ABF1YKL112W UBR2Q07963 1872 aa5.1□□□□□ -1.59
ABF1YKL112W STI1P15705 589 aaKnown RBP RIP-Chip data5.1□□□□□ -1.59not detected
ABF1YKL112W PSE1P32337 1089 aaKnown RBP5.1□□□□□ -1.59
ABF1YKL112W ELM1P32801 640 aa5.1□□□□□ -1.59
ABF1YKL112W YKL100CP34248 587 aa5.1□□□□□ -1.59
ABF1YKL112W SKI2P35207 1287 aaKnown RBP RIP-Chip data5.1□□□□□ -1.59not detected
ABF1YKL112W AKL1P38080 1108 aaKnown RBP5.1□□□□□ -1.59
ABF1YKL112W YBL028CP38202 106 aa5.1□□□□□ -1.59
ABF1YKL112W FTR1P40088 404 aa5.1□□□□□ -1.59
ABF1YKL112W SAP185P40856 1058 aa5.1□□□□□ -1.59
ABF1YKL112W BNA1P47096 177 aa5.1□□□□□ -1.59
ABF1YKL112W VPS62P53285 467 aa5.1□□□□□ -1.59
ABF1YKL112W SPO1P53541 631 aa5.1□□□□□ -1.59
ABF1YKL112W YPR204WQ08995 1032 aa5.1□□□□□ -1.59
ABF1YKL112W DUR1,2P32528 1835 aaKnown RBP5.1□□□□□ -1.59
ABF1YKL112W PUP2P32379 260 aa5.09□□□□□ -1.59
ABF1YKL112W APL6P46682 809 aa5.09□□□□□ -1.59
ABF1YKL112W EFM5P53200 248 aaKnown RBP5.09□□□□□ -1.59
ABF1YKL112W FMP30Q02883 468 aa5.09□□□□□ -1.59
ABF1YKL112W YBL113CQ7M4S9 792 aa5.09□□□□□ -1.59
ABF1YKL112W TRP5P00931 707 aaKnown RBP5.09□□□□□ -1.59
ABF1YKL112W RPB2P08518 1224 aaKnown RBP5.09□□□□□ -1.59
ABF1YKL112W RGP1P16664 663 aa5.09□□□□□ -1.59
ABF1YKL112W SEC15P22224 910 aa5.09□□□□□ -1.59
ABF1YKL112W SIS1P25294 352 aaKnown RBP5.09□□□□□ -1.59
ABF1YKL112W EUG1P32474 517 aa5.09□□□□□ -1.59
ABF1YKL112W TMN3P40071 706 aa5.09□□□□□ -1.59
ABF1YKL112W NIT1P40447 199 aa5.09□□□□□ -1.59
ABF1YKL112W ALG2P43636 503 aa5.09□□□□□ -1.59
ABF1YKL112W YPR097WQ06839 1073 aa5.09□□□□□ -1.59
ABF1YKL112W STB3Q12427 513 aa5.09□□□□□ -1.59
ABF1YKL112W MET6P05694 767 aaKnown RBP5.08□□□□□ -1.6
ABF1YKL112W ADR1P07248 1323 aa5.08□□□□□ -1.6
ABF1YKL112W PET494P07390 489 aaPredicted RBP5.08□□□□□ -1.6
ABF1YKL112W PUP1P25043 261 aa5.08□□□□□ -1.6
ABF1YKL112W SFA1P32771 386 aa5.08□□□□□ -1.6
ABF1YKL112W CCL1P37366 393 aa5.08□□□□□ -1.6
ABF1YKL112W SAE2P46946 345 aa5.08□□□□□ -1.6
ABF1YKL112W MTC3P53077 123 aa5.08□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 20.7 ms