RNA–Protein interactions for RNA: YIL084C

SDS3, Transcript of Component of the Rpd3L histone deacetylase complex, yeastyeast

Gene SDS3, Length 984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDS3YIL084C HXT17P53631 564 aa5.82□□□□□ -1.48
SDS3YIL084C ELA1P53861 379 aaPredicted RBP5.82□□□□□ -1.48
SDS3YIL084C HXT15P54854 567 aa5.82□□□□□ -1.48
SDS3YIL084C MKK2P32491 506 aa5.81□□□□□ -1.48
SDS3YIL084C THI80P35202 319 aa5.81□□□□□ -1.48
SDS3YIL084C NNK1P36003 928 aa5.81□□□□□ -1.48
SDS3YIL084C VPS53P47061 822 aa5.81□□□□□ -1.48
SDS3YIL084C NNF1P47149 201 aa5.81□□□□□ -1.48
SDS3YIL084C SPO20Q04359 397 aa5.81□□□□□ -1.48
SDS3YIL084C SYP1P25623 870 aaKnown RBP5.8□□□□□ -1.48
SDS3YIL084C RER2P35196 286 aa5.8□□□□□ -1.48
SDS3YIL084C CIT3P43635 486 aa5.8□□□□□ -1.48
SDS3YIL084C TYW3P53177 273 aa5.8□□□□□ -1.48
SDS3YIL084C FAL1Q12099 399 aaKnown RBP5.8□□□□□ -1.48
SDS3YIL084C TRP2P00899 507 aaKnown RBP5.79□□□□□ -1.48
SDS3YIL084C LYP1P32487 611 aa5.79□□□□□ -1.48
SDS3YIL084C SMY2P32909 740 aaKnown RBP5.79□□□□□ -1.48
SDS3YIL084C GIP4P39732 760 aa5.79□□□□□ -1.48
SDS3YIL084C CNN1P43618 361 aa5.79□□□□□ -1.48
SDS3YIL084C EEB1Q02891 456 aa5.79□□□□□ -1.48
SDS3YIL084C NAB6Q03735 1134 aaKnown RBP RIP-Chip data5.79□□□□□ -1.48not detected
SDS3YIL084C PTC5Q12511 572 aa5.79□□□□□ -1.48
SDS3YIL084C YSP2Q06681 1438 aa5.79□□□□□ -1.48
SDS3YIL084C SNF7P39929 240 aaKnown RBP5.78□□□□□ -1.48
SDS3YIL084C MSH4P40965 878 aaPredicted RBP5.78□□□□□ -1.48
SDS3YIL084C OYE3P41816 400 aaPredicted RBP5.78□□□□□ -1.48
SDS3YIL084C RCM1P53972 490 aa5.78□□□□□ -1.48
SDS3YIL084C RAT1Q02792 1006 aaKnown RBP5.78□□□□□ -1.48
SDS3YIL084C OPI10Q08202 246 aa5.78□□□□□ -1.48
SDS3YIL084C SSF2Q12153 453 aaPredicted RBP5.78□□□□□ -1.48
SDS3YIL084C DBP5P20449 482 aaKnown RBP5.77□□□□□ -1.49
SDS3YIL084C RET1P22276 1149 aaKnown RBP5.77□□□□□ -1.49
SDS3YIL084C NFS1P25374 497 aa5.77□□□□□ -1.49
SDS3YIL084C ALG3P38179 458 aa5.77□□□□□ -1.49
SDS3YIL084C RSA3Q05942 220 aaKnown RBP5.77□□□□□ -1.49
SDS3YIL084C HRK1Q08732 759 aaKnown RBP5.77□□□□□ -1.49
SDS3YIL084C SEC7P11075 2009 aaKnown RBP5.76□□□□□ -1.49
SDS3YIL084C PRI2P20457 528 aa5.76□□□□□ -1.49
SDS3YIL084C BAS1P22035 811 aa5.76□□□□□ -1.49
SDS3YIL084C AFG2P32794 780 aa5.76□□□□□ -1.49
SDS3YIL084C YAP3P38749 330 aa5.76□□□□□ -1.49
SDS3YIL084C QNS1P38795 714 aaKnown RBP5.76□□□□□ -1.49
SDS3YIL084C YJL049WP47048 450 aa5.76□□□□□ -1.49
SDS3YIL084C HNT2P49775 206 aa5.76□□□□□ -1.49
SDS3YIL084C MAK10Q02197 733 aa5.76□□□□□ -1.49
SDS3YIL084C TIF35Q04067 274 aaKnown RBP5.76□□□□□ -1.49
SDS3YIL084C YLR257WQ06146 321 aaKnown RBP5.76□□□□□ -1.49
SDS3YIL084C MCM7P38132 845 aa5.75□□□□□ -1.49
SDS3YIL084C RGD1P38339 666 aa5.75□□□□□ -1.49
SDS3YIL084C ALT1P52893 592 aa5.75□□□□□ -1.49
SDS3YIL084C EAR1Q03212 550 aa5.75□□□□□ -1.49
SDS3YIL084C TDA5Q06417 326 aaKnown RBP5.75□□□□□ -1.49
SDS3YIL084C RPS4AP0CX35 261 aaKnown RBP5.74□□□□□ -1.49
SDS3YIL084C RPS4BP0CX36 261 aaKnown RBP5.74□□□□□ -1.49
SDS3YIL084C INO1P11986 533 aa5.74□□□□□ -1.49
SDS3YIL084C YPL260WQ08977 551 aa5.74□□□□□ -1.49
SDS3YIL084C RKM4Q12504 494 aa5.74□□□□□ -1.49
SDS3YIL084C GRX1P25373 110 aaKnown RBP5.73□□□□□ -1.49
SDS3YIL084C AGP1P25376 633 aa5.73□□□□□ -1.49
SDS3YIL084C SBA1P28707 216 aaKnown RBP5.73□□□□□ -1.49
SDS3YIL084C OCA5P38738 679 aa5.73□□□□□ -1.49
SDS3YIL084C TPP1Q03796 238 aa5.73□□□□□ -1.49
SDS3YIL084C YLR225CQ05948 407 aaKnown RBP5.73□□□□□ -1.49
SDS3YIL084C YOR059CQ08448 450 aaKnown RBP5.73□□□□□ -1.49
SDS3YIL084C NSI1Q12457 570 aa5.73□□□□□ -1.49
SDS3YIL084C TY3B-GQ99315 1547 aa5.73□□□□□ -1.49
SDS3YIL084C BNR1P40450 1375 aa5.72□□□□□ -1.49
SDS3YIL084C KIP1P28742 1111 aa5.72□□□□□ -1.49
SDS3YIL084C MLS1P30952 554 aa5.72□□□□□ -1.49
SDS3YIL084C YKL107WP34251 309 aa5.72□□□□□ -1.49
SDS3YIL084C MOT2P34909 587 aaKnown RBP5.72□□□□□ -1.49
SDS3YIL084C FLR1P38124 548 aa5.72□□□□□ -1.49
SDS3YIL084C SPF1P39986 1215 aaKnown RBP5.72□□□□□ -1.49
SDS3YIL084C PUS7Q08647 676 aaKnown RBP5.72□□□□□ -1.49
SDS3YIL084C PUF4P25339 888 aaKnown RBP RIP-Chip data5.71□□□□□ -1.5not detected
SDS3YIL084C ABD1P32783 436 aaPredicted RBP5.71□□□□□ -1.5
SDS3YIL084C PIN4P34217 668 aaKnown RBP RIP-Chip data5.71□□□□□ -1.5not detected
SDS3YIL084C YKL069WP36088 180 aa5.71□□□□□ -1.5
SDS3YIL084C MPH1P40562 993 aa5.71□□□□□ -1.5
SDS3YIL084C NAN1Q02931 896 aaKnown RBP5.71□□□□□ -1.5
SDS3YIL084C SSY1Q03770 852 aa5.71□□□□□ -1.5
SDS3YIL084C SHE9Q04172 456 aa5.71□□□□□ -1.5
SDS3YIL084C GNT1Q12096 491 aa5.71□□□□□ -1.5
SDS3YIL084C SPO21Q12411 609 aa5.71□□□□□ -1.5
SDS3YIL084C YOL098CQ12496 1037 aa5.71□□□□□ -1.5
SDS3YIL084C MRP8P35719 219 aa5.7□□□□□ -1.5
SDS3YIL084C YGL176CP46945 554 aa5.7□□□□□ -1.5
SDS3YIL084C YJL045WP47052 634 aa5.7□□□□□ -1.5
SDS3YIL084C NMD3P38861 518 aaKnown RBP5.69□□□□□ -1.5
SDS3YIL084C ESC2Q06340 456 aa5.69□□□□□ -1.5
SDS3YIL084C LPX1Q12405 387 aaKnown RBP5.69□□□□□ -1.5
SDS3YIL084C YBT1P32386 1661 aa5.69□□□□□ -1.5
SDS3YIL084C ADP1P25371 1049 aa5.68□□□□□ -1.5
SDS3YIL084C SRP40P32583 406 aaPredicted RBP5.68□□□□□ -1.5
SDS3YIL084C GPB2P39717 880 aa5.68□□□□□ -1.5
SDS3YIL084C RPN3P40016 523 aaKnown RBP5.68□□□□□ -1.5
SDS3YIL084C SPP382Q06411 708 aaPredicted RBP5.68□□□□□ -1.5
SDS3YIL084C COQ4O13525 335 aa5.67□□□□□ -1.5
SDS3YIL084C STI1P15705 589 aaKnown RBP RIP-Chip data5.67□□□□□ -1.5not detected
SDS3YIL084C PRP6P19735 899 aaPredicted RBP5.67□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 9.9 ms