RNA–Protein interactions for RNA: YHR120W

MSH1, Transcript of DNA-binding protein of the mitochondria, yeastyeast

Gene MSH1, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH1YHR120W ESS1P22696 170 aa5.65□□□□□ -1.51
MSH1YHR120W HMF1P40037 129 aaKnown RBP5.65□□□□□ -1.51
MSH1YHR120W YGL081WP53156 320 aa5.65□□□□□ -1.51
MSH1YHR120W HOS3Q02959 697 aaKnown RBP5.65□□□□□ -1.51
MSH1YHR120W LDB19Q12502 818 aa5.65□□□□□ -1.51
MSH1YHR120W MOT1P32333 1867 aa5.64□□□□□ -1.51
MSH1YHR120W KIN82P25341 720 aa5.64□□□□□ -1.51
MSH1YHR120W ASF1P32447 279 aa5.64□□□□□ -1.51
MSH1YHR120W TVP38P36164 337 aa5.64□□□□□ -1.51
MSH1YHR120W TCD1P38756 429 aa5.64□□□□□ -1.51
MSH1YHR120W HUL5P53119 910 aa5.64□□□□□ -1.51
MSH1YHR120W MSC2Q03455 724 aa5.64□□□□□ -1.51
MSH1YHR120W CSM3Q04659 317 aa5.64□□□□□ -1.51
MSH1YHR120W GET3Q12154 354 aaKnown RBP5.64□□□□□ -1.51
MSH1YHR120W PGK1P00560 416 aaKnown RBP5.64□□□□□ -1.51
MSH1YHR120W ILV1P00927 576 aaKnown RBP5.64□□□□□ -1.51
MSH1YHR120W HSP82P02829 709 aaKnown RBP5.64□□□□□ -1.51
MSH1YHR120W HEM1P09950 548 aaPredicted RBP5.64□□□□□ -1.51
MSH1YHR120W LEO1P38439 464 aa5.64□□□□□ -1.51
MSH1YHR120W CEP3P40969 608 aa5.64□□□□□ -1.51
MSH1YHR120W GPD2P41911 440 aaKnown RBP5.64□□□□□ -1.51
MSH1YHR120W YPT11P48559 417 aa5.64□□□□□ -1.51
MSH1YHR120W MFM1Q02783 413 aa5.64□□□□□ -1.51
MSH1YHR120W PHM6Q05637 104 aa5.64□□□□□ -1.51
MSH1YHR120W ATG11Q12527 1178 aa5.64□□□□□ -1.51
MSH1YHR120W THR4P16120 514 aaKnown RBP5.63□□□□□ -1.51
MSH1YHR120W ORC6P38826 435 aa5.63□□□□□ -1.51
MSH1YHR120W TRS120Q04183 1289 aa5.63□□□□□ -1.51
MSH1YHR120W CRD1Q07560 283 aa5.63□□□□□ -1.51
MSH1YHR120W DCS2Q12123 353 aa5.63□□□□□ -1.51
MSH1YHR120W DUR3P33413 735 aa5.63□□□□□ -1.51
MSH1YHR120W GRS1P38088 690 aaKnown RBP5.63□□□□□ -1.51
MSH1YHR120W STT3P39007 718 aaKnown RBP5.63□□□□□ -1.51
MSH1YHR120W ATG32P40458 529 aa5.63□□□□□ -1.51
MSH1YHR120W BRE2P43132 505 aa5.63□□□□□ -1.51
MSH1YHR120W ZPR1P53303 486 aaKnown RBP5.63□□□□□ -1.51
MSH1YHR120W CNM67P53865 581 aaKnown RBP5.63□□□□□ -1.51
MSH1YHR120W RDS1P25611 832 aa5.62□□□□□ -1.51
MSH1YHR120W PGM1P33401 570 aaKnown RBP5.62□□□□□ -1.51
MSH1YHR120W MAL33P38157 468 aa5.62□□□□□ -1.51
MSH1YHR120W YEL025CP39991 1188 aa5.62□□□□□ -1.51
MSH1YHR120W FAR11P53917 953 aa5.62□□□□□ -1.51
MSH1YHR120W YML020WQ03722 664 aa5.62□□□□□ -1.51
MSH1YHR120W GPI13Q07830 1017 aa5.62□□□□□ -1.51
MSH1YHR120W SLK19Q08581 821 aaKnown RBP5.62□□□□□ -1.51
MSH1YHR120W GSY1P23337 708 aa5.62□□□□□ -1.51
MSH1YHR120W POT1P27796 417 aaKnown RBP RIP-Chip data5.62□□□□□ -1.51not detected
MSH1YHR120W SUV3P32580 737 aa5.62□□□□□ -1.51
MSH1YHR120W RFC5P38251 354 aa5.62□□□□□ -1.51
MSH1YHR120W AZR1P50080 613 aa5.62□□□□□ -1.51
MSH1YHR120W TIP41Q12199 356 aa5.62□□□□□ -1.51
MSH1YHR120W DIP5P53388 608 aa5.61□□□□□ -1.51
MSH1YHR120W SSL2Q00578 843 aa5.61□□□□□ -1.51
MSH1YHR120W EAR1Q03212 550 aa5.61□□□□□ -1.51
MSH1YHR120W SVF1Q05515 481 aa5.61□□□□□ -1.51
MSH1YHR120W RPL22AP05749 121 aaKnown RBP5.61□□□□□ -1.51
MSH1YHR120W HIP1P06775 603 aa5.61□□□□□ -1.51
MSH1YHR120W SUP45P12385 437 aaKnown RBP5.61□□□□□ -1.51
MSH1YHR120W AFT1P22149 690 aa5.61□□□□□ -1.51
MSH1YHR120W RME1P32338 300 aaKnown RBP5.61□□□□□ -1.51
MSH1YHR120W SPC110P32380 944 aa5.61□□□□□ -1.51
MSH1YHR120W SGM1P47166 707 aa5.61□□□□□ -1.51
MSH1YHR120W PSP2P50109 593 aaKnown RBP5.61□□□□□ -1.51
MSH1YHR120W PGI1P12709 554 aaKnown RBP5.61□□□□□ -1.51
MSH1YHR120W CLN3P13365 580 aa5.61□□□□□ -1.51
MSH1YHR120W YGR153WP48238 217 aa5.61□□□□□ -1.51
MSH1YHR120W MDR1P53258 950 aa5.61□□□□□ -1.51
MSH1YHR120W YOR296WQ08748 1289 aa5.61□□□□□ -1.51
MSH1YHR120W PTC5Q12511 572 aa5.61□□□□□ -1.51
MSH1YHR120W ALG1P16661 449 aa5.6□□□□□ -1.51
MSH1YHR120W IRE1P32361 1115 aa5.6□□□□□ -1.51
MSH1YHR120W SMY2P32909 740 aaKnown RBP5.6□□□□□ -1.51
MSH1YHR120W TVP23P38962 199 aa5.6□□□□□ -1.51
MSH1YHR120W FIS1P40515 155 aa5.6□□□□□ -1.51
MSH1YHR120W INP51P40559 946 aaKnown RBP5.6□□□□□ -1.51
MSH1YHR120W FOL2P51601 243 aaKnown RBP5.6□□□□□ -1.51
MSH1YHR120W YVH1Q02256 364 aaKnown RBP5.6□□□□□ -1.51
MSH1YHR120W NBL1Q3E7Y6 73 aa5.6□□□□□ -1.51
MSH1YHR120W TRS33Q99394 268 aa5.6□□□□□ -1.51
MSH1YHR120W PET111P08468 800 aa5.6□□□□□ -1.51
MSH1YHR120W GPA1P08539 472 aa5.6□□□□□ -1.51
MSH1YHR120W PRP22P24384 1145 aaKnown RBP5.6□□□□□ -1.51
MSH1YHR120W YKT6P36015 200 aaKnown RBP5.6□□□□□ -1.51
MSH1YHR120W TFG2P41896 400 aaPredicted RBP5.6□□□□□ -1.51
MSH1YHR120W SAD1P43589 448 aa5.6□□□□□ -1.51
MSH1YHR120W YNL115CP53925 644 aa5.6□□□□□ -1.51
MSH1YHR120W UBC1P21734 215 aaKnown RBP5.59□□□□□ -1.51
MSH1YHR120W CDC48P25694 835 aaKnown RBP5.59□□□□□ -1.51
MSH1YHR120W ALD5P40047 520 aaKnown RBP5.59□□□□□ -1.51
MSH1YHR120W CUS1Q02554 436 aaPredicted RBP5.59□□□□□ -1.51
MSH1YHR120W EIS1Q05050 843 aaKnown RBP5.59□□□□□ -1.51
MSH1YHR120W AHC1Q12433 566 aa5.59□□□□□ -1.51
MSH1YHR120W TUF1P02992 437 aaKnown RBP5.59□□□□□ -1.51
MSH1YHR120W MSC7P38694 644 aa5.59□□□□□ -1.51
MSH1YHR120W RRM3P38766 723 aa5.59□□□□□ -1.51
MSH1YHR120W BRL1P38770 471 aa5.59□□□□□ -1.51
MSH1YHR120W CIN4P39110 191 aa5.59□□□□□ -1.51
MSH1YHR120W SDA1P53313 767 aaKnown RBP5.59□□□□□ -1.51
MSH1YHR120W PGA2P53903 129 aa5.59□□□□□ -1.51
MSH1YHR120W NCR1Q12200 1170 aa5.59□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 27.2 ms