RNA–Protein interactions for RNA: YHR108W

GGA2, Transcript of Protein that regulates Arf1p, Arf2p to facilitate Golgi trafficking, yeastyeast

Gene GGA2, Length 1,758 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GGA2YHR108W SMC3P47037 1230 aa9.03□□□□□ -0.96
GGA2YHR108W YGR117CP53270 476 aa9.03□□□□□ -0.96
GGA2YHR108W MAL13P53338 473 aa9.03□□□□□ -0.96
GGA2YHR108W FUS2Q05670 677 aa9.03□□□□□ -0.96
GGA2YHR108W VAC14Q06708 880 aa9.03□□□□□ -0.96
GGA2YHR108W PFK1P16861 987 aaKnown RBP9.02□□□□□ -0.97
GGA2YHR108W CDC60P26637 1090 aaKnown RBP9.02□□□□□ -0.97
GGA2YHR108W APL1P27351 700 aa9.02□□□□□ -0.97
GGA2YHR108W SRB4P32569 687 aa9.02□□□□□ -0.97
GGA2YHR108W PIH1P38768 344 aa9.02□□□□□ -0.97
GGA2YHR108W NDT80P38830 627 aa9.02□□□□□ -0.97
GGA2YHR108W FPK1P53739 893 aa9.02□□□□□ -0.97
GGA2YHR108W PPR1P07272 904 aaPredicted RBP9.01□□□□□ -0.97
GGA2YHR108W SSB1P11484 613 aaKnown RBP9.01□□□□□ -0.97
GGA2YHR108W KRS1P15180 591 aaKnown RBP9.01□□□□□ -0.97
GGA2YHR108W GAP1P19145 602 aaPredicted RBP9.01□□□□□ -0.97
GGA2YHR108W BIM1P40013 344 aa9.01□□□□□ -0.97
GGA2YHR108W SSB2P40150 613 aaKnown RBP9.01□□□□□ -0.97
GGA2YHR108W HUL4P40985 892 aa9.01□□□□□ -0.97
GGA2YHR108W FET4P40988 552 aa9.01□□□□□ -0.97
GGA2YHR108W IES1P43579 692 aa9.01□□□□□ -0.97
GGA2YHR108W AIM7Q12156 149 aa9.01□□□□□ -0.97
GGA2YHR108W GAL2P13181 574 aa9.01□□□□□ -0.97
GGA2YHR108W PDC6P26263 563 aaKnown RBP9.01□□□□□ -0.97
GGA2YHR108W ACA1P39970 489 aa9.01□□□□□ -0.97
GGA2YHR108W BUD16P39988 312 aa9.01□□□□□ -0.97
GGA2YHR108W EFM4P40516 257 aa9.01□□□□□ -0.97
GGA2YHR108W CNM67P53865 581 aaKnown RBP9.01□□□□□ -0.97
GGA2YHR108W ORC4P54791 529 aa9.01□□□□□ -0.97
GGA2YHR108W TCO89Q08921 799 aa9.01□□□□□ -0.97
GGA2YHR108W GIN4Q12263 1142 aa9.01□□□□□ -0.97
GGA2YHR108W RAD57P25301 460 aa9□□□□□ -0.97
GGA2YHR108W UGA4P32837 571 aa9□□□□□ -0.97
GGA2YHR108W PGM1P33401 570 aaKnown RBP9□□□□□ -0.97
GGA2YHR108W SLI15P38283 698 aa9□□□□□ -0.97
GGA2YHR108W SQS1P53866 767 aaKnown RBP9□□□□□ -0.97
GGA2YHR108W BOP3P53958 396 aa9□□□□□ -0.97
GGA2YHR108W RRB1Q04225 511 aaKnown RBP9□□□□□ -0.97
GGA2YHR108W SUB2Q07478 446 aaKnown RBP9□□□□□ -0.97
GGA2YHR108W MED1Q12321 566 aa9□□□□□ -0.97
GGA2YHR108W MRF1P30775 413 aaPredicted RBP8.99□□□□□ -0.97
GGA2YHR108W CIN4P39110 191 aa8.99□□□□□ -0.97
GGA2YHR108W ARP6Q12509 438 aa8.99□□□□□ -0.97
GGA2YHR108W FKS1P38631 1876 aaKnown RBP8.99□□□□□ -0.97
GGA2YHR108W TOM70P07213 617 aaKnown RBP8.99□□□□□ -0.97
GGA2YHR108W CKI1P20485 582 aa8.99□□□□□ -0.97
GGA2YHR108W XRS2P33301 854 aa8.99□□□□□ -0.97
GGA2YHR108W NIP100P33420 868 aa8.99□□□□□ -0.97
GGA2YHR108W BYE1P36106 594 aa8.99□□□□□ -0.97
GGA2YHR108W PHO88P38264 188 aaPredicted RBP8.99□□□□□ -0.97
GGA2YHR108W CCT4P39078 528 aaKnown RBP8.99□□□□□ -0.97
GGA2YHR108W NBP1P52919 319 aaPredicted RBP8.99□□□□□ -0.97
GGA2YHR108W LIF1P53150 421 aa8.99□□□□□ -0.97
GGA2YHR108W GIR2Q03768 265 aaPredicted RBP8.99□□□□□ -0.97
GGA2YHR108W YPR078CQ06813 372 aa8.99□□□□□ -0.97
GGA2YHR108W OSH2Q12451 1283 aa8.99□□□□□ -0.97
GGA2YHR108W SRD1P09007 221 aa8.98□□□□□ -0.97
GGA2YHR108W RAD18P10862 487 aa8.98□□□□□ -0.97
GGA2YHR108W RPO26P20435 155 aa8.98□□□□□ -0.97
GGA2YHR108W BRE2P43132 505 aa8.98□□□□□ -0.97
GGA2YHR108W VID30P53076 958 aa8.98□□□□□ -0.97
GGA2YHR108W YML037CQ03703 340 aa8.98□□□□□ -0.97
GGA2YHR108W YPL277CQ08989 487 aa8.98□□□□□ -0.97
GGA2YHR108W SMC1P32908 1225 aa8.97□□□□□ -0.97
GGA2YHR108W ATG23Q06671 453 aa8.97□□□□□ -0.97
GGA2YHR108W YDL057WQ07379 328 aa8.97□□□□□ -0.97
GGA2YHR108W DAS2Q12084 232 aa8.97□□□□□ -0.97
GGA2YHR108W PCK1P10963 549 aa8.96□□□□□ -0.97
GGA2YHR108W CLN3P13365 580 aa8.96□□□□□ -0.97
GGA2YHR108W RPN3P40016 523 aaKnown RBP8.96□□□□□ -0.97
GGA2YHR108W COS5P47187 383 aa8.96□□□□□ -0.97
GGA2YHR108W CCM1P48237 864 aaPredicted RBP8.96□□□□□ -0.97
GGA2YHR108W DIP5P53388 608 aa8.96□□□□□ -0.97
GGA2YHR108W NGL3Q03210 505 aa8.96□□□□□ -0.97
GGA2YHR108W SOV1Q04748 898 aa8.96□□□□□ -0.97
GGA2YHR108W QCR6P00127 147 aa8.96□□□□□ -0.98
GGA2YHR108W PHR1P05066 565 aaKnown RBP RIP-Chip data8.96□□□□□ -0.98not detected
GGA2YHR108W SWI6P09959 803 aa8.96□□□□□ -0.98
GGA2YHR108W DAL7P21826 554 aa8.96□□□□□ -0.98
GGA2YHR108W TRK2P28584 889 aa8.96□□□□□ -0.98
GGA2YHR108W KTR2P33550 425 aa8.96□□□□□ -0.98
GGA2YHR108W JNM1P36224 373 aa8.96□□□□□ -0.98
GGA2YHR108W UBP5P39944 805 aa8.96□□□□□ -0.98
GGA2YHR108W VHR2P40041 505 aa8.96□□□□□ -0.98
GGA2YHR108W PHM6Q05637 104 aa8.96□□□□□ -0.98
GGA2YHR108W YLR001CQ07895 862 aa8.96□□□□□ -0.98
GGA2YHR108W RKM4Q12504 494 aa8.96□□□□□ -0.98
GGA2YHR108W CSR2Q12734 1121 aa8.96□□□□□ -0.98
GGA2YHR108W PGK1P00560 416 aaKnown RBP8.95□□□□□ -0.98
GGA2YHR108W SUP45P12385 437 aaKnown RBP8.95□□□□□ -0.98
GGA2YHR108W HXT1P32465 570 aa8.95□□□□□ -0.98
GGA2YHR108W SUV3P32580 737 aa8.95□□□□□ -0.98
GGA2YHR108W CNS1P33313 385 aa8.95□□□□□ -0.98
GGA2YHR108W SMF1P38925 575 aa8.95□□□□□ -0.98
GGA2YHR108W ULP2P40537 1034 aaPredicted RBP8.95□□□□□ -0.98
GGA2YHR108W GPD2P41911 440 aaKnown RBP8.95□□□□□ -0.98
GGA2YHR108W TOF1P53840 1238 aa8.95□□□□□ -0.98
GGA2YHR108W ALD6P54115 500 aaKnown RBP8.95□□□□□ -0.98
GGA2YHR108W TSR1Q07381 788 aaKnown RBP8.95□□□□□ -0.98
GGA2YHR108W WHI4Q07655 649 aaKnown RBP8.95□□□□□ -0.98
Retrieved 100 of 5,963 RNA–protein pairs in 139.7 ms