RNA–Protein interactions for RNA: YGL011C

SCL1, Transcript of Alpha 1 subunit of the 20S proteasome, yeastyeast

Gene SCL1, Length 759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCL1YGL011C HRQ1Q05549 1077 aa6.47□□□□□ -1.37
SCL1YGL011C SRO9P25567 434 aaKnown RBP6.46□□□□□ -1.38
SCL1YGL011C PRO1P32264 428 aa6.46□□□□□ -1.38
SCL1YGL011C PPG1P32838 368 aa6.46□□□□□ -1.38
SCL1YGL011C MDL2P33311 773 aa6.46□□□□□ -1.38
SCL1YGL011C PIK1P39104 1066 aa6.46□□□□□ -1.38
SCL1YGL011C GEM1P39722 662 aa6.46□□□□□ -1.38
SCL1YGL011C RTA1P53047 317 aa6.46□□□□□ -1.38
SCL1YGL011C TRE1Q08919 783 aa6.46□□□□□ -1.38
SCL1YGL011C AAR2P32357 355 aaPredicted RBP6.45□□□□□ -1.38
SCL1YGL011C YKL151CP36059 337 aa6.45□□□□□ -1.38
SCL1YGL011C BET3P36149 193 aa6.45□□□□□ -1.38
SCL1YGL011C NMD2P38798 1089 aaKnown RBP6.45□□□□□ -1.38
SCL1YGL011C GTS1P40956 396 aa6.45□□□□□ -1.38
SCL1YGL011C HUL4P40985 892 aa6.45□□□□□ -1.38
SCL1YGL011C NPL3Q01560 414 aaKnown RBP RIP-Chip data6.45□□□□□ -1.38not detected
SCL1YGL011C RSC58Q07979 502 aa6.45□□□□□ -1.38
SCL1YGL011C HBN1Q96VH4 193 aa6.45□□□□□ -1.38
SCL1YGL011C TRP3P00937 484 aa6.44□□□□□ -1.38
SCL1YGL011C BI4P03879 638 aa6.44□□□□□ -1.38
SCL1YGL011C PPH3P32345 308 aa6.44□□□□□ -1.38
SCL1YGL011C CDC12P32468 407 aaKnown RBP6.44□□□□□ -1.38
SCL1YGL011C YBR284WP38150 797 aa6.44□□□□□ -1.38
SCL1YGL011C PTC7P38797 343 aa6.44□□□□□ -1.38
SCL1YGL011C GGA2P38817 585 aaKnown RBP6.44□□□□□ -1.38
SCL1YGL011C CHZ1P40019 153 aaPredicted RBP6.44□□□□□ -1.38
SCL1YGL011C ALG12P53730 551 aa6.44□□□□□ -1.38
SCL1YGL011C UBP3Q01477 912 aaKnown RBP RIP-Chip data6.44□□□□□ -1.38not detected
SCL1YGL011C YDL124WQ07551 312 aaKnown RBP6.44□□□□□ -1.38
SCL1YGL011C AIM26P32858 118 aa6.43□□□□□ -1.38
SCL1YGL011C YKR073CP36153 106 aa6.43□□□□□ -1.38
SCL1YGL011C SAH1P39954 449 aaKnown RBP6.43□□□□□ -1.38
SCL1YGL011C TPO2P53283 614 aa6.43□□□□□ -1.38
SCL1YGL011C NSI1Q12457 570 aa6.43□□□□□ -1.38
SCL1YGL011C CYC7P00045 113 aa6.42□□□□□ -1.38
SCL1YGL011C PHO8P11491 566 aa6.42□□□□□ -1.38
SCL1YGL011C TOP3P13099 656 aa6.42□□□□□ -1.38
SCL1YGL011C ERT1P38140 529 aa6.42□□□□□ -1.38
SCL1YGL011C LSB3P43603 459 aaKnown RBP6.42□□□□□ -1.38
SCL1YGL011C SDH1Q00711 640 aa6.42□□□□□ -1.38
SCL1YGL011C SSY1Q03770 852 aa6.42□□□□□ -1.38
SCL1YGL011C NBA1Q08229 501 aaKnown RBP6.42□□□□□ -1.38
SCL1YGL011C RSB1Q08417 382 aa6.42□□□□□ -1.38
SCL1YGL011C MSD1P15179 658 aaKnown RBP6.41□□□□□ -1.38
SCL1YGL011C CDC11P32458 415 aa6.41□□□□□ -1.38
SCL1YGL011C RRP14P36080 434 aaKnown RBP6.41□□□□□ -1.38
SCL1YGL011C SIT1P39980 628 aa6.41□□□□□ -1.38
SCL1YGL011C SRP1Q02821 542 aaKnown RBP6.41□□□□□ -1.38
SCL1YGL011C YPR071WQ12346 211 aa6.41□□□□□ -1.38
SCL1YGL011C NPP1P25353 742 aa6.4□□□□□ -1.38
SCL1YGL011C AFR1P33304 620 aa6.4□□□□□ -1.38
SCL1YGL011C YRO2P38079 344 aa6.4□□□□□ -1.38
SCL1YGL011C YLR125WQ12138 136 aa6.4□□□□□ -1.38
SCL1YGL011C THS1P04801 734 aaKnown RBP6.39□□□□□ -1.39
SCL1YGL011C TOM70P07213 617 aaKnown RBP6.39□□□□□ -1.39
SCL1YGL011C TOS1P38288 455 aa6.39□□□□□ -1.39
SCL1YGL011C MTC3P53077 123 aa6.39□□□□□ -1.39
SCL1YGL011C MAP1Q01662 387 aaKnown RBP RIP-Chip data6.39□□□□□ -1.39not detected
SCL1YGL011C MDM38Q08179 573 aa6.39□□□□□ -1.39
SCL1YGL011C MED7Q08278 222 aa6.39□□□□□ -1.39
SCL1YGL011C MET6P05694 767 aaKnown RBP6.38□□□□□ -1.39
SCL1YGL011C ACE2P21192 770 aa6.38□□□□□ -1.39
SCL1YGL011C ADP1P25371 1049 aa6.38□□□□□ -1.39
SCL1YGL011C PET10P36139 283 aa6.38□□□□□ -1.39
SCL1YGL011C GIC1P38785 314 aa6.38□□□□□ -1.39
SCL1YGL011C NPP2P39997 493 aa6.38□□□□□ -1.39
SCL1YGL011C BUL2Q03758 920 aaKnown RBP6.38□□□□□ -1.39
SCL1YGL011C SVS1Q12254 260 aa6.38□□□□□ -1.39
SCL1YGL011C ADE8P04161 214 aa6.37□□□□□ -1.39
SCL1YGL011C SPS1P08458 490 aa6.37□□□□□ -1.39
SCL1YGL011C THI4P32318 326 aa6.37□□□□□ -1.39
SCL1YGL011C SPC42P36094 363 aa6.37□□□□□ -1.39
SCL1YGL011C BRN1P38170 754 aa6.37□□□□□ -1.39
SCL1YGL011C UBP6P43593 499 aaKnown RBP6.37□□□□□ -1.39
SCL1YGL011C HFM1P51979 1187 aa6.37□□□□□ -1.39
SCL1YGL011C ATG13Q06628 738 aa6.37□□□□□ -1.39
SCL1YGL011C YLL058WQ12198 575 aa6.37□□□□□ -1.39
SCL1YGL011C LPX1Q12405 387 aaKnown RBP6.37□□□□□ -1.39
SCL1YGL011C ABZ1P37254 787 aaPredicted RBP6.36□□□□□ -1.39
SCL1YGL011C TOK1P40310 691 aa6.36□□□□□ -1.39
SCL1YGL011C RRT14P40470 206 aa6.36□□□□□ -1.39
SCL1YGL011C LCD1Q04377 747 aa6.36□□□□□ -1.39
SCL1YGL011C GLT1Q12680 2145 aaKnown RBP6.36□□□□□ -1.39
SCL1YGL011C TSL1P38427 1098 aaKnown RBP6.35□□□□□ -1.39
SCL1YGL011C ALO1P54783 526 aaKnown RBP6.35□□□□□ -1.39
SCL1YGL011C SRT1Q03175 343 aa6.35□□□□□ -1.39
SCL1YGL011C XYL2Q07993 356 aa6.35□□□□□ -1.39
SCL1YGL011C RIB2Q12362 591 aaKnown RBP6.35□□□□□ -1.39
SCL1YGL011C DOM34P33309 386 aa6.34□□□□□ -1.39
SCL1YGL011C GDH3P39708 457 aa6.34□□□□□ -1.39
SCL1YGL011C YER158CP40095 573 aa6.34□□□□□ -1.39
SCL1YGL011C SEC26P41810 973 aaKnown RBP6.34□□□□□ -1.39
SCL1YGL011C GYP7P48365 746 aa6.34□□□□□ -1.39
SCL1YGL011C MAL11P53048 616 aa6.34□□□□□ -1.39
SCL1YGL011C SFB2P53953 876 aa6.34□□□□□ -1.39
SCL1YGL011C FUN30P31380 1131 aa6.33□□□□□ -1.4
SCL1YGL011C RFC5P38251 354 aa6.33□□□□□ -1.4
SCL1YGL011C HSV2P50079 448 aaPredicted RBP6.33□□□□□ -1.4
SCL1YGL011C DOS2P54858 310 aa6.33□□□□□ -1.4
SCL1YGL011C MTC5Q03897 1148 aa6.33□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms