RNA–Protein interactions for RNA: YDR240C

SNU56, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU56, Length 1,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU56YDR240C MXR1P40029 184 aa4.49□□□□□ -1.69
SNU56YDR240C SPT20P50875 604 aa4.49□□□□□ -1.69
SNU56YDR240C DUS4Q06063 367 aa4.49□□□□□ -1.69
SNU56YDR240C BI4P03879 638 aa4.49□□□□□ -1.69
SNU56YDR240C GAL10P04397 699 aa4.49□□□□□ -1.69
SNU56YDR240C CMP2P14747 604 aa4.49□□□□□ -1.69
SNU56YDR240C SRM1P21827 482 aa4.49□□□□□ -1.69
SNU56YDR240C DBP2P24783 546 aaKnown RBP4.49□□□□□ -1.69
SNU56YDR240C APL1P27351 700 aa4.49□□□□□ -1.69
SNU56YDR240C PIN4P34217 668 aaKnown RBP RIP-Chip data4.49□□□□□ -1.69not detected
SNU56YDR240C MAP1Q01662 387 aaKnown RBP RIP-Chip data4.49□□□□□ -1.69not detected
SNU56YDR240C MSC2Q03455 724 aa4.49□□□□□ -1.69
SNU56YDR240C YPL066WQ12194 479 aa4.49□□□□□ -1.69
SNU56YDR240C YLL058WQ12198 575 aa4.49□□□□□ -1.69
SNU56YDR240C MOT2P34909 587 aaKnown RBP4.48□□□□□ -1.69
SNU56YDR240C YGL176CP46945 554 aa4.48□□□□□ -1.69
SNU56YDR240C PLB2Q03674 706 aa4.48□□□□□ -1.69
SNU56YDR240C RXT3Q07458 294 aa4.48□□□□□ -1.69
SNU56YDR240C PIN2Q12057 282 aa4.48□□□□□ -1.69
SNU56YDR240C TAD3Q9URQ3 322 aa4.48□□□□□ -1.69
SNU56YDR240C TUB2P02557 457 aaKnown RBP4.47□□□□□ -1.69
SNU56YDR240C CTS1P29029 562 aa4.47□□□□□ -1.69
SNU56YDR240C SHM2P37291 469 aaKnown RBP4.47□□□□□ -1.69
SNU56YDR240C SIP5P40210 489 aaKnown RBP4.47□□□□□ -1.69
SNU56YDR240C FAA4P47912 694 aaKnown RBP4.47□□□□□ -1.69
SNU56YDR240C ROT1Q03691 256 aa4.47□□□□□ -1.69
SNU56YDR240C ACK1Q07622 623 aaPredicted RBP4.47□□□□□ -1.69
SNU56YDR240C GPB1Q08886 897 aa4.47□□□□□ -1.69
SNU56YDR240C AGP1P25376 633 aa4.46□□□□□ -1.7
SNU56YDR240C SBA1P28707 216 aaKnown RBP4.46□□□□□ -1.7
SNU56YDR240C TAT2P38967 592 aa4.46□□□□□ -1.7
SNU56YDR240C MAD1P40957 749 aa4.46□□□□□ -1.7
SNU56YDR240C SNU71P53207 620 aaKnown RBP4.46□□□□□ -1.7
SNU56YDR240C GDE1Q02979 1223 aa4.46□□□□□ -1.7
SNU56YDR240C VPS16Q03308 798 aa4.46□□□□□ -1.7
SNU56YDR240C VTS1Q08831 523 aaKnown RBP RIP-Chip data4.46□□□□□ -1.7not detected
SNU56YDR240C RPP2AP05319 106 aaKnown RBP4.45□□□□□ -1.7
SNU56YDR240C CDC6P09119 513 aa4.45□□□□□ -1.7
SNU56YDR240C STE11P23561 717 aa4.45□□□□□ -1.7
SNU56YDR240C CDC20P26309 610 aa4.45□□□□□ -1.7
SNU56YDR240C VPS62P53285 467 aa4.45□□□□□ -1.7
SNU56YDR240C YLR225CQ05948 407 aaKnown RBP4.45□□□□□ -1.7
SNU56YDR240C HFM1P51979 1187 aa4.44□□□□□ -1.7
SNU56YDR240C MTC3P53077 123 aa4.44□□□□□ -1.7
SNU56YDR240C PNS1Q12412 539 aa4.44□□□□□ -1.7
SNU56YDR240C MPT5P39016 859 aaKnown RBP RIP-Chip data4.43□□□□□ -1.7not detected
SNU56YDR240C MND2P40577 368 aa4.43□□□□□ -1.7
SNU56YDR240C CWC24P53769 259 aa4.43□□□□□ -1.7
SNU56YDR240C NOP12Q08208 459 aaKnown RBP4.43□□□□□ -1.7
SNU56YDR240C HMI1Q12039 706 aa4.43□□□□□ -1.7
SNU56YDR240C FAL1Q12099 399 aaKnown RBP4.43□□□□□ -1.7
SNU56YDR240C FUN30P31380 1131 aa4.43□□□□□ -1.7
SNU56YDR240C YAP1801P38856 637 aa4.43□□□□□ -1.7
SNU56YDR240C SHE9Q04172 456 aa4.43□□□□□ -1.7
SNU56YDR240C MDM38Q08179 573 aa4.43□□□□□ -1.7
SNU56YDR240C OSW2Q12202 724 aa4.43□□□□□ -1.7
SNU56YDR240C RPC82P32349 654 aa4.42□□□□□ -1.7
SNU56YDR240C ABD1P32783 436 aaPredicted RBP4.42□□□□□ -1.7
SNU56YDR240C HRQ1Q05549 1077 aa4.42□□□□□ -1.7
SNU56YDR240C JIP5Q06214 492 aaPredicted RBP4.42□□□□□ -1.7
SNU56YDR240C URN1Q06525 465 aaKnown RBP4.42□□□□□ -1.7
SNU56YDR240C YKL151CP36059 337 aa4.41□□□□□ -1.7
SNU56YDR240C ZRG8P40021 1076 aa4.41□□□□□ -1.7
SNU56YDR240C MNN10P50108 393 aaKnown RBP4.41□□□□□ -1.7
SNU56YDR240C SRP1Q02821 542 aaKnown RBP4.41□□□□□ -1.7
SNU56YDR240C SRT1Q03175 343 aa4.41□□□□□ -1.7
SNU56YDR240C YAP6Q03935 383 aa4.41□□□□□ -1.7
SNU56YDR240C ESC2Q06340 456 aa4.41□□□□□ -1.7
SNU56YDR240C ADY3Q07732 790 aa4.41□□□□□ -1.7
SNU56YDR240C OPI10Q08202 246 aa4.41□□□□□ -1.7
SNU56YDR240C EMC1P25574 760 aa4.4□□□□□ -1.71
SNU56YDR240C CDC12P32468 407 aaKnown RBP4.4□□□□□ -1.71
SNU56YDR240C SCT1P32784 759 aa4.4□□□□□ -1.71
SNU56YDR240C POA1P38218 177 aa4.4□□□□□ -1.71
SNU56YDR240C MET12P46151 657 aa4.4□□□□□ -1.71
SNU56YDR240C GTF1P53260 183 aaPredicted RBP4.4□□□□□ -1.71
SNU56YDR240C YLR224WQ05947 369 aa4.4□□□□□ -1.71
SNU56YDR240C TPO1Q07824 586 aa4.4□□□□□ -1.71
SNU56YDR240C LST4P34239 828 aa4.39□□□□□ -1.71
SNU56YDR240C MRP8P35719 219 aa4.39□□□□□ -1.71
SNU56YDR240C GIC1P38785 314 aa4.39□□□□□ -1.71
SNU56YDR240C XYL2Q07993 356 aa4.39□□□□□ -1.71
SNU56YDR240C VBA5P36172 582 aa4.38□□□□□ -1.71
SNU56YDR240C ECM21P38167 1117 aaKnown RBP4.38□□□□□ -1.71
SNU56YDR240C SAH1P39954 449 aaKnown RBP4.38□□□□□ -1.71
SNU56YDR240C GUS1P46655 708 aaKnown RBP RIP-Chip data4.38□□□□□ -1.71not detected
SNU56YDR240C PSP2P50109 593 aaKnown RBP4.38□□□□□ -1.71
SNU56YDR240C YGR012WP53206 393 aa4.38□□□□□ -1.71
SNU56YDR240C TMA10Q06177 86 aa4.38□□□□□ -1.71
SNU56YDR240C HIS5P07172 385 aa4.37□□□□□ -1.71
SNU56YDR240C HSF1P10961 833 aa4.37□□□□□ -1.71
SNU56YDR240C ENA1P13587 1091 aa4.37□□□□□ -1.71
SNU56YDR240C ATG19P35193 415 aa4.37□□□□□ -1.71
SNU56YDR240C YKR078WP36158 585 aaKnown RBP4.37□□□□□ -1.71
SNU56YDR240C MBP1P39678 833 aa4.37□□□□□ -1.71
SNU56YDR240C IOC3P43596 787 aa4.37□□□□□ -1.71
SNU56YDR240C MCM6P53091 1017 aaKnown RBP4.37□□□□□ -1.71
SNU56YDR240C ENA2Q01896 1091 aa4.37□□□□□ -1.71
SNU56YDR240C CDA1Q06702 301 aa4.37□□□□□ -1.71
SNU56YDR240C ENA5Q12691 1091 aa4.37□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 24.5 ms