RNA–Protein interactions for RNA: YDR228C

PCF11, Transcript of mRNA 3' end processing factor, yeastyeast

Gene PCF11, Length 1,881 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PCF11YDR228C CMP2P14747 604 aa3.43□□□□□ -1.86
PCF11YDR228C MCM7P38132 845 aa3.43□□□□□ -1.86
PCF11YDR228C TYW3P53177 273 aa3.43□□□□□ -1.86
PCF11YDR228C VPS62P53285 467 aa3.43□□□□□ -1.86
PCF11YDR228C ACK1Q07622 623 aaPredicted RBP3.43□□□□□ -1.86
PCF11YDR228C YOR352WQ08816 343 aa3.43□□□□□ -1.86
PCF11YDR228C PET112P33893 541 aa3.42□□□□□ -1.86
PCF11YDR228C LST4P34239 828 aa3.42□□□□□ -1.86
PCF11YDR228C SIP5P40210 489 aaKnown RBP3.42□□□□□ -1.86
PCF11YDR228C GSF2Q04697 403 aaKnown RBP3.42□□□□□ -1.86
PCF11YDR228C VTS1Q08831 523 aaKnown RBP RIP-Chip data3.42□□□□□ -1.86not detected
PCF11YDR228C RKM4Q12504 494 aa3.42□□□□□ -1.86
PCF11YDR228C STE11P23561 717 aa3.41□□□□□ -1.86
PCF11YDR228C APL1P27351 700 aa3.41□□□□□ -1.86
PCF11YDR228C MPT5P39016 859 aaKnown RBP RIP-Chip data3.41□□□□□ -1.86not detected
PCF11YDR228C HFM1P51979 1187 aa3.41□□□□□ -1.86
PCF11YDR228C PBP1P53297 722 aaKnown RBP3.41□□□□□ -1.86
PCF11YDR228C RXT3Q07458 294 aa3.41□□□□□ -1.86
PCF11YDR228C GPB1Q08886 897 aa3.41□□□□□ -1.86
PCF11YDR228C HMI1Q12039 706 aa3.41□□□□□ -1.86
PCF11YDR228C THS1P04801 734 aaKnown RBP3.41□□□□□ -1.86
PCF11YDR228C YKL151CP36059 337 aa3.41□□□□□ -1.86
PCF11YDR228C SPP382Q06411 708 aaPredicted RBP3.41□□□□□ -1.86
PCF11YDR228C INO1P11986 533 aa3.4□□□□□ -1.87
PCF11YDR228C YLL058WQ12198 575 aa3.4□□□□□ -1.87
PCF11YDR228C XYL2Q07993 356 aa3.39□□□□□ -1.87
PCF11YDR228C NOP12Q08208 459 aaKnown RBP3.39□□□□□ -1.87
PCF11YDR228C MOT2P34909 587 aaKnown RBP3.39□□□□□ -1.87
PCF11YDR228C MND2P40577 368 aa3.39□□□□□ -1.87
PCF11YDR228C YGL176CP46945 554 aa3.39□□□□□ -1.87
PCF11YDR228C MNN10P50108 393 aaKnown RBP3.39□□□□□ -1.87
PCF11YDR228C YLR224WQ05947 369 aa3.39□□□□□ -1.87
PCF11YDR228C YLR225CQ05948 407 aaKnown RBP3.39□□□□□ -1.87
PCF11YDR228C ADY3Q07732 790 aa3.39□□□□□ -1.87
PCF11YDR228C YKL107WP34251 309 aa3.38□□□□□ -1.87
PCF11YDR228C YAP1801P38856 637 aa3.38□□□□□ -1.87
PCF11YDR228C MET12P46151 657 aa3.38□□□□□ -1.87
PCF11YDR228C FAA4P47912 694 aaKnown RBP3.38□□□□□ -1.87
PCF11YDR228C YAP6Q03935 383 aa3.38□□□□□ -1.87
PCF11YDR228C HRQ1Q05549 1077 aa3.38□□□□□ -1.87
PCF11YDR228C TUB2P02557 457 aaKnown RBP3.37□□□□□ -1.87
PCF11YDR228C EMC1P25574 760 aa3.37□□□□□ -1.87
PCF11YDR228C DCG1P32460 244 aa3.37□□□□□ -1.87
PCF11YDR228C CHA4P43634 648 aa3.37□□□□□ -1.87
PCF11YDR228C SPO20Q04359 397 aa3.37□□□□□ -1.87
PCF11YDR228C MDM38Q08179 573 aa3.37□□□□□ -1.87
PCF11YDR228C TRM2P33753 639 aa3.37□□□□□ -1.87
PCF11YDR228C PIN4P34217 668 aaKnown RBP RIP-Chip data3.37□□□□□ -1.87not detected
PCF11YDR228C GCV2P49095 1034 aa3.37□□□□□ -1.87
PCF11YDR228C TMA10Q06177 86 aa3.37□□□□□ -1.87
PCF11YDR228C ESC2Q06340 456 aa3.37□□□□□ -1.87
PCF11YDR228C TPO1Q07824 586 aa3.37□□□□□ -1.87
PCF11YDR228C PIN2Q12057 282 aa3.37□□□□□ -1.87
PCF11YDR228C PMA1P05030 918 aaKnown RBP3.36□□□□□ -1.87
PCF11YDR228C MCM6P53091 1017 aaKnown RBP3.36□□□□□ -1.87
PCF11YDR228C GTF1P53260 183 aaPredicted RBP3.36□□□□□ -1.87
PCF11YDR228C SRT1Q03175 343 aa3.36□□□□□ -1.87
PCF11YDR228C PUS9Q12069 462 aa3.36□□□□□ -1.87
PCF11YDR228C NTO1Q12311 748 aa3.36□□□□□ -1.87
PCF11YDR228C HIS5P07172 385 aa3.35□□□□□ -1.87
PCF11YDR228C AGP1P25376 633 aa3.35□□□□□ -1.87
PCF11YDR228C FUN30P31380 1131 aa3.35□□□□□ -1.87
PCF11YDR228C GIC1P38785 314 aa3.35□□□□□ -1.87
PCF11YDR228C SNF7P39929 240 aaKnown RBP3.35□□□□□ -1.87
PCF11YDR228C GDE1Q02979 1223 aa3.35□□□□□ -1.87
PCF11YDR228C VPS16Q03308 798 aa3.35□□□□□ -1.87
PCF11YDR228C SVF1Q05515 481 aa3.35□□□□□ -1.87
PCF11YDR228C CDA1Q06702 301 aa3.35□□□□□ -1.87
PCF11YDR228C HCM1P25364 564 aa3.35□□□□□ -1.87
PCF11YDR228C SBA1P28707 216 aaKnown RBP3.35□□□□□ -1.87
PCF11YDR228C ECM21P38167 1117 aaKnown RBP3.35□□□□□ -1.87
PCF11YDR228C PLB1P39105 664 aa3.35□□□□□ -1.87
PCF11YDR228C NPP2P39997 493 aa3.35□□□□□ -1.87
PCF11YDR228C ZRG8P40021 1076 aa3.35□□□□□ -1.87
PCF11YDR228C SLI1P53304 468 aa3.35□□□□□ -1.87
PCF11YDR228C OSW2Q12202 724 aa3.35□□□□□ -1.87
PCF11YDR228C NAP1P25293 417 aaKnown RBP3.34□□□□□ -1.87
PCF11YDR228C PMI40P29952 429 aaKnown RBP3.34□□□□□ -1.87
PCF11YDR228C ABD1P32783 436 aaPredicted RBP3.34□□□□□ -1.87
PCF11YDR228C POA1P38218 177 aa3.34□□□□□ -1.87
PCF11YDR228C CLN2P20438 545 aa3.33□□□□□ -1.88
PCF11YDR228C CDC12P32468 407 aaKnown RBP3.33□□□□□ -1.88
PCF11YDR228C URM1P40554 99 aaPredicted RBP3.33□□□□□ -1.88
PCF11YDR228C MSE1P48525 536 aa3.33□□□□□ -1.88
PCF11YDR228C PHO23P50947 330 aa3.33□□□□□ -1.88
PCF11YDR228C EXG2P52911 562 aa3.33□□□□□ -1.88
PCF11YDR228C YGR012WP53206 393 aa3.33□□□□□ -1.88
PCF11YDR228C DEF1P35732 738 aaKnown RBP3.33□□□□□ -1.88
PCF11YDR228C SHE9Q04172 456 aa3.33□□□□□ -1.88
PCF11YDR228C PNS1Q12412 539 aa3.33□□□□□ -1.88
PCF11YDR228C RPP2AP05319 106 aaKnown RBP3.32□□□□□ -1.88
PCF11YDR228C RPC82P32349 654 aa3.32□□□□□ -1.88
PCF11YDR228C CHS7P38843 316 aa3.32□□□□□ -1.88
PCF11YDR228C MBP1P39678 833 aa3.32□□□□□ -1.88
PCF11YDR228C KRI1P42846 591 aaKnown RBP3.32□□□□□ -1.88
PCF11YDR228C GUS1P46655 708 aaKnown RBP RIP-Chip data3.32□□□□□ -1.88not detected
PCF11YDR228C SUN4P53616 420 aa3.32□□□□□ -1.88
PCF11YDR228C KCS1Q12494 1050 aa3.32□□□□□ -1.88
PCF11YDR228C SPE1P08432 466 aa3.31□□□□□ -1.88
PCF11YDR228C HSF1P10961 833 aa3.31□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 66.7 ms