RNA–Protein interactions for RNA: YDR225W

HTA1, Transcript of Histone H2A, yeast

Gene HTA1, Length 399 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HTA1	YDR225W	SND1	Q04007	877 aa		4.08	□□□□□ -1.76
HTA1	YDR225W	PHM7	Q12252	991 aa		4.08	□□□□□ -1.76
HTA1	YDR225W	PTC5	Q12511	572 aa		4.08	□□□□□ -1.76
HTA1	YDR225W	CDC9	P04819	755 aa		4.07	□□□□□ -1.76
HTA1	YDR225W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
HTA1	YDR225W	ATP4	P05626	244 aa		4.07	□□□□□ -1.76
HTA1	YDR225W	TRX2	P22803	104 aa	Known RBP	4.07	□□□□□ -1.76
HTA1	YDR225W	BAP2	P38084	609 aa		4.07	□□□□□ -1.76
HTA1	YDR225W	PNT1	P38969	423 aa		4.07	□□□□□ -1.76
HTA1	YDR225W	SIT1	P39980	628 aa		4.07	□□□□□ -1.76
HTA1	YDR225W	GPP1	P41277	250 aa	Known RBP	4.07	□□□□□ -1.76
HTA1	YDR225W	LEM3	P42838	414 aa		4.07	□□□□□ -1.76
HTA1	YDR225W	ALG2	P43636	503 aa		4.07	□□□□□ -1.76
HTA1	YDR225W	TY1A-DR2	Q03964	440 aa	Known RBP	4.07	□□□□□ -1.76
HTA1	YDR225W	VMS1	Q04311	632 aa	Known RBP	4.07	□□□□□ -1.76
HTA1	YDR225W	HFD1	Q04458	532 aa		4.07	□□□□□ -1.76
HTA1	YDR225W	SPP382	Q06411	708 aa	Predicted RBP	4.07	□□□□□ -1.76
HTA1	YDR225W	HIR1	P32479	840 aa		4.06	□□□□□ -1.76
HTA1	YDR225W	YEL1	P34225	687 aa		4.06	□□□□□ -1.76
HTA1	YDR225W	REI1	P38344	393 aa	Predicted RBP	4.06	□□□□□ -1.76
HTA1	YDR225W	SAH1	P39954	449 aa	Known RBP	4.06	□□□□□ -1.76
HTA1	YDR225W	SPO74	P45819	413 aa		4.06	□□□□□ -1.76
HTA1	YDR225W	GCV1	P48015	400 aa		4.06	□□□□□ -1.76
HTA1	YDR225W	MET13	P53128	600 aa		4.06	□□□□□ -1.76
HTA1	YDR225W	TGL2	P54857	326 aa		4.06	□□□□□ -1.76
HTA1	YDR225W	MTQ2	Q03920	221 aa	Predicted RBP	4.06	□□□□□ -1.76
HTA1	YDR225W	DUS3	Q06053	668 aa	Known RBP	4.06	□□□□□ -1.76
HTA1	YDR225W	YDL121C	Q07541	149 aa		4.06	□□□□□ -1.76
HTA1	YDR225W	LAP2	Q10740	671 aa		4.06	□□□□□ -1.76
HTA1	YDR225W	NYV1	Q12255	253 aa		4.06	□□□□□ -1.76
HTA1	YDR225W	ADE8	P04161	214 aa		4.05	□□□□□ -1.76
HTA1	YDR225W	THS1	P04801	734 aa	Known RBP	4.05	□□□□□ -1.76
HTA1	YDR225W	SRD1	P09007	221 aa		4.05	□□□□□ -1.76
HTA1	YDR225W	RET1	P22276	1149 aa	Known RBP	4.05	□□□□□ -1.76
HTA1	YDR225W	PCL2	P25693	308 aa		4.05	□□□□□ -1.76
HTA1	YDR225W	PPH3	P32345	308 aa		4.05	□□□□□ -1.76
HTA1	YDR225W	YRO2	P38079	344 aa		4.05	□□□□□ -1.76
HTA1	YDR225W	YAR028W	P39548	234 aa		4.05	□□□□□ -1.76
HTA1	YDR225W	VPS53	P47061	822 aa		4.05	□□□□□ -1.76
HTA1	YDR225W	PEX14	P53112	341 aa		4.05	□□□□□ -1.76
HTA1	YDR225W	SOK2	P53438	785 aa	Predicted RBP	4.05	□□□□□ -1.76
HTA1	YDR225W	YNR014W	P53719	212 aa		4.05	□□□□□ -1.76
HTA1	YDR225W	BUL2	Q03758	920 aa	Known RBP	4.05	□□□□□ -1.76
HTA1	YDR225W	ATG16	Q03818	150 aa		4.05	□□□□□ -1.76
HTA1	YDR225W	LCD1	Q04377	747 aa		4.05	□□□□□ -1.76
HTA1	YDR225W	TDA6	Q06466	467 aa		4.05	□□□□□ -1.76
HTA1	YDR225W	TRE2	Q08693	809 aa		4.05	□□□□□ -1.76
HTA1	YDR225W	PIF1	P07271	859 aa		4.04	□□□□□ -1.76
HTA1	YDR225W	RPL11A	P0C0W9	174 aa	Known RBP	4.04	□□□□□ -1.76
HTA1	YDR225W	YER152C	P10356	443 aa		4.04	□□□□□ -1.76
HTA1	YDR225W	RAD18	P10862	487 aa		4.04	□□□□□ -1.76
HTA1	YDR225W	PDC5	P16467	563 aa	Known RBP	4.04	□□□□□ -1.76
HTA1	YDR225W	SFL1	P20134	766 aa		4.04	□□□□□ -1.76
HTA1	YDR225W	DBP2	P24783	546 aa	Known RBP	4.04	□□□□□ -1.76
HTA1	YDR225W	DPB3	P27344	201 aa		4.04	□□□□□ -1.76
HTA1	YDR225W	KNS1	P32350	737 aa	Predicted RBP	4.04	□□□□□ -1.76
HTA1	YDR225W	PLC1	P32383	869 aa		4.04	□□□□□ -1.76
HTA1	YDR225W	SPC29	P33419	253 aa		4.04	□□□□□ -1.76
HTA1	YDR225W	PEA2	P40091	420 aa		4.04	□□□□□ -1.76
HTA1	YDR225W	LSB3	P43603	459 aa	Known RBP	4.04	□□□□□ -1.76
HTA1	YDR225W	YGR021W	P53212	290 aa		4.04	□□□□□ -1.76
HTA1	YDR225W	YPL260W	Q08977	551 aa		4.04	□□□□□ -1.76
HTA1	YDR225W	RPL11B	Q3E757	174 aa	Predicted RBP	4.04	□□□□□ -1.76
HTA1	YDR225W	MPD2	Q99316	277 aa		4.04	□□□□□ -1.76
HTA1	YDR225W	SST2	P11972	698 aa	Known RBP	4.03	□□□□□ -1.76
HTA1	YDR225W	NFS1	P25374	497 aa		4.03	□□□□□ -1.76
HTA1	YDR225W	AFR1	P33304	620 aa		4.03	□□□□□ -1.76
HTA1	YDR225W	MTC2	P34246	357 aa		4.03	□□□□□ -1.76
HTA1	YDR225W	QNS1	P38795	714 aa	Known RBP	4.03	□□□□□ -1.76
HTA1	YDR225W	BOI2	P39969	1040 aa		4.03	□□□□□ -1.76
HTA1	YDR225W	TOK1	P40310	691 aa		4.03	□□□□□ -1.76
HTA1	YDR225W	YJR096W	P47137	282 aa		4.03	□□□□□ -1.76
HTA1	YDR225W	YGR045C	P53229	120 aa		4.03	□□□□□ -1.76
HTA1	YDR225W	YNL034W	P53963	612 aa		4.03	□□□□□ -1.76
HTA1	YDR225W	YNL018C	P53976	612 aa		4.03	□□□□□ -1.76
HTA1	YDR225W	SRP1	Q02821	542 aa	Known RBP	4.03	□□□□□ -1.76
HTA1	YDR225W	AVO1	Q08236	1176 aa		4.03	□□□□□ -1.76
HTA1	YDR225W	ALG6	Q12001	544 aa	Known RBP	4.03	□□□□□ -1.76
HTA1	YDR225W	GIN4	Q12263	1142 aa		4.03	□□□□□ -1.76
HTA1	YDR225W	KIP1	P28742	1111 aa		4.02	□□□□□ -1.77
HTA1	YDR225W	CDC12	P32468	407 aa	Known RBP	4.02	□□□□□ -1.77
HTA1	YDR225W	ERT1	P38140	529 aa		4.02	□□□□□ -1.77
HTA1	YDR225W	HSE1	P38753	452 aa		4.02	□□□□□ -1.77
HTA1	YDR225W	POL5	P39985	1022 aa	Known RBP	4.02	□□□□□ -1.77
HTA1	YDR225W	MXR1	P40029	184 aa		4.02	□□□□□ -1.77
HTA1	YDR225W	GIP2	P40036	548 aa		4.02	□□□□□ -1.77
HTA1	YDR225W	IES5	P40060	125 aa		4.02	□□□□□ -1.77
HTA1	YDR225W	CAF16	P43569	289 aa		4.02	□□□□□ -1.77
HTA1	YDR225W	GYP8	P43570	497 aa		4.02	□□□□□ -1.77
HTA1	YDR225W	TY4A-J	P47023	414 aa		4.02	□□□□□ -1.77
HTA1	YDR225W	YRB30	P53107	440 aa	Predicted RBP	4.02	□□□□□ -1.77
HTA1	YDR225W	YGR283C	P53336	341 aa	Predicted RBP	4.02	□□□□□ -1.77
HTA1	YDR225W	TMA64	Q04600	565 aa	Known RBP	4.02	□□□□□ -1.77
HTA1	YDR225W	YLL054C	Q12244	843 aa		4.02	□□□□□ -1.77
HTA1	YDR225W	SPO21	Q12411	609 aa		4.02	□□□□□ -1.77
HTA1	YDR225W	NKP1	Q12493	238 aa		4.02	□□□□□ -1.77
HTA1	YDR225W	YPR053C	Q6Q5F3	151 aa		4.02	□□□□□ -1.77
HTA1	YDR225W	PGI1	P12709	554 aa	Known RBP	4.01	□□□□□ -1.77
HTA1	YDR225W	YEF3	P16521	1044 aa	Known RBP	4.01	□□□□□ -1.77
HTA1	YDR225W	NPP1	P25353	742 aa		4.01	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 40 ms