RNA–Protein interactions for RNA: YDR213W

UPC2, Transcript of Sterol regulatory element binding protein, yeast

Gene UPC2, Length 2,742 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UPC2	YDR213W	OSW1	Q08692	278 aa		4.65	□□□□□ -1.66
UPC2	YDR213W	URB1	P34241	1764 aa	Known RBP	4.65	□□□□□ -1.67
UPC2	YDR213W	ARG8	P18544	423 aa		4.65	□□□□□ -1.67
UPC2	YDR213W	KCC4	P25389	1037 aa		4.65	□□□□□ -1.67
UPC2	YDR213W	UGA3	P26370	528 aa		4.65	□□□□□ -1.67
UPC2	YDR213W	APL2	P36000	726 aa	Predicted RBP	4.65	□□□□□ -1.67
UPC2	YDR213W	RTS1	P38903	757 aa		4.65	□□□□□ -1.67
UPC2	YDR213W	ALD3	P54114	506 aa		4.65	□□□□□ -1.67
UPC2	YDR213W	UTP5	Q04177	643 aa	Known RBP	4.65	□□□□□ -1.67
UPC2	YDR213W	NDL1	Q06568	189 aa		4.65	□□□□□ -1.67
UPC2	YDR213W	NOP6	Q07623	225 aa	Known RBP	4.65	□□□□□ -1.67
UPC2	YDR213W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.64	□□□□□ -1.67	not detected
UPC2	YDR213W	SRB4	P32569	687 aa		4.64	□□□□□ -1.67
UPC2	YDR213W	NPL6	P32832	435 aa		4.64	□□□□□ -1.67
UPC2	YDR213W	RAD5	P32849	1169 aa	Predicted RBP	4.64	□□□□□ -1.67
UPC2	YDR213W	NFU1	P32860	256 aa		4.64	□□□□□ -1.67
UPC2	YDR213W	STE13	P33894	931 aa		4.64	□□□□□ -1.67
UPC2	YDR213W	RFT1	P38206	574 aa	Predicted RBP	4.64	□□□□□ -1.67
UPC2	YDR213W	EFM2	P38347	419 aa		4.64	□□□□□ -1.67
UPC2	YDR213W	AKR1	P39010	764 aa		4.64	□□□□□ -1.67
UPC2	YDR213W	IAH1	P41734	238 aa		4.64	□□□□□ -1.67
UPC2	YDR213W	YRB1	P41920	201 aa	Known RBP	4.64	□□□□□ -1.67
UPC2	YDR213W	IES1	P43579	692 aa		4.64	□□□□□ -1.67
UPC2	YDR213W	FMS1	P50264	508 aa		4.64	□□□□□ -1.67
UPC2	YDR213W	JJJ1	P53863	590 aa		4.64	□□□□□ -1.67
UPC2	YDR213W	ECM23	Q02710	187 aa		4.64	□□□□□ -1.67
UPC2	YDR213W	USA1	Q03714	838 aa		4.64	□□□□□ -1.67
UPC2	YDR213W	KRE28	Q04431	385 aa		4.64	□□□□□ -1.67
UPC2	YDR213W	MMR1	Q06324	491 aa		4.64	□□□□□ -1.67
UPC2	YDR213W	STB3	Q12427	513 aa		4.64	□□□□□ -1.67
UPC2	YDR213W	SBP1	P10080	294 aa	Known RBP	4.64	□□□□□ -1.67
UPC2	YDR213W	PDR1	P12383	1068 aa		4.64	□□□□□ -1.67
UPC2	YDR213W	ISF1	P32488	338 aa		4.64	□□□□□ -1.67
UPC2	YDR213W	GRX7	P38068	203 aa		4.64	□□□□□ -1.67
UPC2	YDR213W	MIP6	P38760	659 aa	Known RBP	4.64	□□□□□ -1.67
UPC2	YDR213W	REV7	P38927	245 aa		4.64	□□□□□ -1.67
UPC2	YDR213W	CST6	P40535	587 aa		4.64	□□□□□ -1.67
UPC2	YDR213W	YIL001W	P40560	513 aa		4.64	□□□□□ -1.67
UPC2	YDR213W	PCL10	P53124	433 aa		4.64	□□□□□ -1.67
UPC2	YDR213W	YNL193W	P53870	558 aa		4.64	□□□□□ -1.67
UPC2	YDR213W	NCS2	P53923	493 aa	Predicted RBP	4.64	□□□□□ -1.67
UPC2	YDR213W	HDA1	P53973	706 aa		4.64	□□□□□ -1.67
UPC2	YDR213W	PIG1	Q06216	648 aa		4.64	□□□□□ -1.67
UPC2	YDR213W	SPP382	Q06411	708 aa	Predicted RBP	4.64	□□□□□ -1.67
UPC2	YDR213W	GNT1	Q12096	491 aa		4.64	□□□□□ -1.67
UPC2	YDR213W	YBL113C	Q7M4S9	792 aa		4.64	□□□□□ -1.67
UPC2	YDR213W	PIF1	P07271	859 aa		4.63	□□□□□ -1.67
UPC2	YDR213W	APL1	P27351	700 aa		4.63	□□□□□ -1.67
UPC2	YDR213W	KAR9	P32526	644 aa		4.63	□□□□□ -1.67
UPC2	YDR213W	KAP123	P40069	1113 aa	Known RBP	4.63	□□□□□ -1.67
UPC2	YDR213W	SEC27	P41811	889 aa	Known RBP	4.63	□□□□□ -1.67
UPC2	YDR213W	DAN4	P47179	1161 aa		4.63	□□□□□ -1.67
UPC2	YDR213W	ENP2	P48234	707 aa	Known RBP	4.63	□□□□□ -1.67
UPC2	YDR213W	HFM1	P51979	1187 aa		4.63	□□□□□ -1.67
UPC2	YDR213W	VTC3	Q02725	835 aa		4.63	□□□□□ -1.67
UPC2	YDR213W	PKH1	Q03407	766 aa		4.63	□□□□□ -1.67
UPC2	YDR213W	YOR296W	Q08748	1289 aa		4.63	□□□□□ -1.67
UPC2	YDR213W	YVC1	Q12324	675 aa		4.63	□□□□□ -1.67
UPC2	YDR213W	YIL177C	P40434	1758 aa		4.63	□□□□□ -1.67
UPC2	YDR213W	YJL225C	P40889	1758 aa		4.63	□□□□□ -1.67
UPC2	YDR213W	BAS1	P22035	811 aa		4.63	□□□□□ -1.67
UPC2	YDR213W	MVD1	P32377	396 aa	Known RBP	4.63	□□□□□ -1.67
UPC2	YDR213W	SSE1	P32589	693 aa	Known RBP	4.63	□□□□□ -1.67
UPC2	YDR213W	TFC3	P34111	1160 aa		4.63	□□□□□ -1.67
UPC2	YDR213W	SPP381	P38282	291 aa	Predicted RBP	4.63	□□□□□ -1.67
UPC2	YDR213W	TIF4631	P39935	952 aa	Known RBP	4.63	□□□□□ -1.67
UPC2	YDR213W	YNL320W	P42840	284 aa		4.63	□□□□□ -1.67
UPC2	YDR213W	RSA3	Q05942	220 aa	Known RBP	4.63	□□□□□ -1.67
UPC2	YDR213W	MAG2	Q06436	670 aa	Known RBP	4.63	□□□□□ -1.67
UPC2	YDR213W	YOL036W	Q08206	761 aa		4.63	□□□□□ -1.67
UPC2	YDR213W	PPR1	P07272	904 aa	Predicted RBP	4.62	□□□□□ -1.67
UPC2	YDR213W	REC107	P21651	314 aa		4.62	□□□□□ -1.67
UPC2	YDR213W	SDH2	P21801	266 aa		4.62	□□□□□ -1.67
UPC2	YDR213W	KES1	P35844	434 aa	Known RBP	4.62	□□□□□ -1.67
UPC2	YDR213W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	4.62	□□□□□ -1.67	RIP-Chip
UPC2	YDR213W	YBP1	P38315	674 aa		4.62	□□□□□ -1.67
UPC2	YDR213W	STN1	P38960	494 aa		4.62	□□□□□ -1.67
UPC2	YDR213W	TMA22	P47089	198 aa	Predicted RBP	4.62	□□□□□ -1.67
UPC2	YDR213W	PTK2	P47116	818 aa	Known RBP	4.62	□□□□□ -1.67
UPC2	YDR213W	YNR029C	P53729	429 aa	Known RBP	4.62	□□□□□ -1.67
UPC2	YDR213W	UBX4	P54730	416 aa		4.62	□□□□□ -1.67
UPC2	YDR213W	UFD2	P54860	961 aa		4.62	□□□□□ -1.67
UPC2	YDR213W	CWC15	Q03772	175 aa	Known RBP	4.62	□□□□□ -1.67
UPC2	YDR213W	PNP1	Q05788	311 aa		4.62	□□□□□ -1.67
UPC2	YDR213W	SPO75	Q07798	868 aa		4.62	□□□□□ -1.67
UPC2	YDR213W	APL5	Q08951	932 aa	Known RBP	4.62	□□□□□ -1.67
UPC2	YDR213W	ZRT2	Q12436	422 aa		4.62	□□□□□ -1.67
UPC2	YDR213W	RPL24A	P04449	155 aa	Known RBP	4.62	□□□□□ -1.67
UPC2	YDR213W	RPC19	P28000	142 aa	Known RBP	4.62	□□□□□ -1.67
UPC2	YDR213W	VFA1	P40080	203 aa		4.62	□□□□□ -1.67
UPC2	YDR213W	GVP36	P40531	326 aa	Known RBP	4.62	□□□□□ -1.67
UPC2	YDR213W	LYS14	P40971	790 aa		4.62	□□□□□ -1.67
UPC2	YDR213W	CCM1	P48237	864 aa	Predicted RBP	4.62	□□□□□ -1.67
UPC2	YDR213W	MCM6	P53091	1017 aa	Known RBP	4.62	□□□□□ -1.67
UPC2	YDR213W	MET7	Q08645	548 aa		4.62	□□□□□ -1.67
UPC2	YDR213W	SRF1	Q12516	437 aa		4.62	□□□□□ -1.67
UPC2	YDR213W	LAM4	P38800	1345 aa		4.61	□□□□□ -1.67
UPC2	YDR213W	PTH2	P34222	208 aa		4.61	□□□□□ -1.67
UPC2	YDR213W	VPS8	P39702	1274 aa		4.61	□□□□□ -1.67
UPC2	YDR213W	NUP60	P39705	539 aa		4.61	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 82.6 ms